data_PRDCC_900077
# 
_chem_comp.id                                    PRD_900077 
_chem_comp.name                                  "2-deoxy-2,2-difluoro-4-O-alpha-D-glucopyranosyl-alpha-D-arabino-hexopyranosyl fluoride" 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C12 H19 F3 O9" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        364.269 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_pcm                              ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900077 "C1'" C7  C 0 1 N N R 25.073 -30.246 281.810 3.701  -0.583 0.449  TW7 1 C1  polymer 1 1 1  ? ? ? 
PRD_900077 "C2'" C8  C 0 1 N N N 23.933 -30.067 280.812 3.319  0.509  -0.553 TW7 1 C2  polymer 1 1 2  ? ? ? 
PRD_900077 F1    F1  F 0 1 N N N 24.923 -31.347 282.530 3.874  -0.014 1.716  TW7 1 F1  polymer 1 1 3  ? ? ? 
PRD_900077 F2    F2  F 0 1 N N N 23.970 -28.802 280.339 3.198  -0.050 -1.830 TW7 1 F21 polymer 1 1 4  ? ? ? 
PRD_900077 F3    F3  F 0 1 N N N 22.762 -30.157 281.506 4.308  1.498  -0.568 TW7 1 F22 polymer 1 1 5  ? ? ? 
PRD_900077 O1    O1  O 0 1 N N N 25.484 -32.150 278.114 -0.310 0.579  0.411  TW7 1 O4  polymer 1 1 6  ? ? ? 
PRD_900077 "C3'" C9  C 0 1 N N S 24.028 -31.036 279.690 1.982  1.129  -0.135 TW7 1 C3  polymer 1 1 7  ? ? ? 
PRD_900077 "C4'" C10 C 0 1 N N S 25.329 -31.001 278.980 0.924  0.024  -0.048 TW7 1 C4  polymer 1 1 8  ? ? ? 
PRD_900077 "C5'" C11 C 0 1 N N R 26.502 -31.096 279.975 1.400  -1.049 0.935  TW7 1 C5  polymer 1 1 9  ? ? ? 
PRD_900077 "C6'" C12 C 0 1 N N N 27.818 -30.827 279.229 0.377  -2.186 0.983  TW7 1 C6  polymer 1 1 10 ? ? ? 
PRD_900077 "O3'" O7  O 0 1 N N N 22.944 -30.766 278.716 1.582  2.100  -1.105 TW7 1 O3  polymer 1 1 11 ? ? ? 
PRD_900077 "O5'" O8  O 0 1 N N N 26.380 -30.188 281.097 2.662  -1.563 0.505  TW7 1 O5  polymer 1 1 12 ? ? ? 
PRD_900077 "O6'" O9  O 0 1 N N N 27.963 -29.379 279.052 0.772  -3.141 1.970  TW7 1 O6  polymer 1 1 13 ? ? ? 
PRD_900077 C1    C1  C 0 1 N N R 25.101 -31.942 276.770 -1.116 1.140  -0.627 GLC 2 C1  polymer 1 1 14 ? ? ? 
PRD_900077 C2    C2  C 0 1 N N R 24.737 -33.285 276.172 -2.244 1.968  -0.005 GLC 2 C2  polymer 1 1 15 ? ? ? 
PRD_900077 C3    C3  C 0 1 N N S 25.910 -34.116 275.893 -3.138 1.050  0.833  GLC 2 C3  polymer 1 1 16 ? ? ? 
PRD_900077 C4    C4  C 0 1 N N S 26.918 -33.395 275.049 -3.668 -0.080 -0.056 GLC 2 C4  polymer 1 1 17 ? ? ? 
PRD_900077 C5    C5  C 0 1 N N R 27.337 -32.172 275.810 -2.485 -0.829 -0.675 GLC 2 C5  polymer 1 1 18 ? ? ? 
PRD_900077 C6    C6  C 0 1 N N N 28.436 -31.441 275.126 -3.006 -1.920 -1.612 GLC 2 C6  polymer 1 1 19 ? ? ? 
PRD_900077 O2    O2  O 0 1 N N N 23.835 -34.016 277.070 -1.686 2.984  0.830  GLC 2 O2  polymer 1 1 20 ? ? ? 
PRD_900077 O3    O3  O 0 1 N N N 25.511 -35.343 275.210 -4.235 1.800  1.359  GLC 2 O3  polymer 1 1 21 ? ? ? 
PRD_900077 O4    O4  O 0 1 N N N 28.026 -34.277 274.776 -4.445 -0.984 0.733  GLC 2 O4  polymer 1 1 22 ? ? ? 
PRD_900077 O5    O5  O 0 1 N N N 26.195 -31.272 275.998 -1.677 0.089  -1.415 GLC 2 O5  polymer 1 1 23 ? ? ? 
PRD_900077 O6    O6  O 0 1 N N N 27.872 -30.635 274.124 -1.908 -2.694 -2.099 GLC 2 O6  polymer 1 1 24 ? ? ? 
PRD_900077 H8    H8  H 0 1 N N N 25.038 -29.374 282.480 4.631  -1.057 0.134  TW7 1 H1  polymer 1 1 25 ? ? ? 
PRD_900077 H13   H13 H 0 1 N N N 23.883 -32.048 280.096 2.090  1.608  0.838  TW7 1 H3  polymer 1 1 26 ? ? ? 
PRD_900077 H14   H14 H 0 1 N N N 25.418 -30.069 278.403 0.780  -0.421 -1.032 TW7 1 H4  polymer 1 1 27 ? ? ? 
PRD_900077 H15   H15 H 0 1 N N N 26.536 -32.128 280.354 1.504  -0.612 1.928  TW7 1 H5  polymer 1 1 28 ? ? ? 
PRD_900077 H16   H16 H 0 1 N N N 27.795 -31.321 278.246 -0.603 -1.783 1.240  TW7 1 H61 polymer 1 1 29 ? ? ? 
PRD_900077 H17   H17 H 0 1 N N N 28.663 -31.216 279.815 0.326  -2.671 0.008  TW7 1 H62 polymer 1 1 30 ? ? ? 
PRD_900077 H18   H18 H 0 1 N N N 22.105 -30.786 279.161 2.210  2.826  -1.216 TW7 1 HO3 polymer 1 1 31 ? ? ? 
PRD_900077 H19   H19 H 0 1 N N N 28.773 -29.195 278.591 0.168  -3.892 2.055  TW7 1 HO6 polymer 1 1 32 ? ? ? 
PRD_900077 H1    H1  H 0 1 N N N 24.209 -31.299 276.737 -0.501 1.781  -1.259 GLC 2 H1  polymer 1 1 33 ? ? ? 
PRD_900077 H2    H2  H 0 1 N N N 24.209 -33.100 275.225 -2.835 2.430  -0.796 GLC 2 H2  polymer 1 1 34 ? ? ? 
PRD_900077 H3    H3  H 0 1 N N N 26.388 -34.382 276.847 -2.559 0.627  1.654  GLC 2 H3  polymer 1 1 35 ? ? ? 
PRD_900077 H4    H4  H 0 1 N N N 26.443 -33.087 274.106 -4.288 0.340  -0.848 GLC 2 H4  polymer 1 1 36 ? ? ? 
PRD_900077 H5    H5  H 0 1 N N N 27.698 -32.491 276.799 -1.888 -1.282 0.116  GLC 2 H5  polymer 1 1 37 ? ? ? 
PRD_900077 H6    H6  H 0 1 N N N 29.137 -32.159 274.675 -3.693 -2.568 -1.067 GLC 2 H61 polymer 1 1 38 ? ? ? 
PRD_900077 H7    H7  H 0 1 N N N 28.972 -30.812 275.852 -3.527 -1.461 -2.451 GLC 2 H62 polymer 1 1 39 ? ? ? 
PRD_900077 H9    H9  H 0 1 N N N 23.071 -33.482 277.255 -1.104 3.600  0.365  GLC 2 HO2 polymer 1 1 40 ? ? ? 
PRD_900077 H10   H10 H 0 1 N N N 24.872 -35.807 275.738 -3.971 2.537  1.927  GLC 2 HO3 polymer 1 1 41 ? ? ? 
PRD_900077 H11   H11 H 0 1 N N N 27.717 -35.035 274.294 -5.213 -0.576 1.156  GLC 2 HO4 polymer 1 1 42 ? ? ? 
PRD_900077 H12   H12 H 0 1 N N N 28.561 -30.159 273.675 -2.164 -3.406 -2.700 GLC 2 HO6 polymer 1 1 43 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900077 O6    C6    SING N N 1  
PRD_900077 O4    C4    SING N N 2  
PRD_900077 C4    C5    SING N N 3  
PRD_900077 C4    C3    SING N N 4  
PRD_900077 C6    C5    SING N N 5  
PRD_900077 O3    C3    SING N N 6  
PRD_900077 C5    O5    SING N N 7  
PRD_900077 C3    C2    SING N N 8  
PRD_900077 O5    C1    SING N N 9  
PRD_900077 C2    C1    SING N N 10 
PRD_900077 C2    O2    SING N N 11 
PRD_900077 C1    O1    SING N N 12 
PRD_900077 O1    "C4'" SING N N 13 
PRD_900077 "O3'" "C3'" SING N N 14 
PRD_900077 "C4'" "C3'" SING N N 15 
PRD_900077 "C4'" "C5'" SING N N 16 
PRD_900077 "O6'" "C6'" SING N N 17 
PRD_900077 "C6'" "C5'" SING N N 18 
PRD_900077 "C3'" "C2'" SING N N 19 
PRD_900077 "C5'" "O5'" SING N N 20 
PRD_900077 F2    "C2'" SING N N 21 
PRD_900077 "C2'" F3    SING N N 22 
PRD_900077 "C2'" "C1'" SING N N 23 
PRD_900077 "O5'" "C1'" SING N N 24 
PRD_900077 "C1'" F1    SING N N 25 
PRD_900077 C1    H1    SING N N 26 
PRD_900077 C2    H2    SING N N 27 
PRD_900077 C3    H3    SING N N 28 
PRD_900077 C4    H4    SING N N 29 
PRD_900077 C5    H5    SING N N 30 
PRD_900077 C6    H6    SING N N 31 
PRD_900077 C6    H7    SING N N 32 
PRD_900077 "C1'" H8    SING N N 33 
PRD_900077 O2    H9    SING N N 34 
PRD_900077 O3    H10   SING N N 35 
PRD_900077 O4    H11   SING N N 36 
PRD_900077 O6    H12   SING N N 37 
PRD_900077 "C3'" H13   SING N N 38 
PRD_900077 "C4'" H14   SING N N 39 
PRD_900077 "C5'" H15   SING N N 40 
PRD_900077 "C6'" H16   SING N N 41 
PRD_900077 "C6'" H17   SING N N 42 
PRD_900077 "O3'" H18   SING N N 43 
PRD_900077 "O6'" H19   SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900077 SMILES           ACDLabs              12.01 "C2(OC1C(C(C(F)OC1CO)(F)F)O)C(O)C(C(C(O2)CO)O)O"                                                                                                     
PRD_900077 InChI            InChI                1.03  
;InChI=1S/C12H19F3O9/c13-11-12(14,15)9(21)8(4(2-17)23-11)24-10-7(20)6(19)5(18)3(1-16)22-10/h3-11,16-21H,1-2H2/t3-,4-,5-,
 6+,7-,8-,9+,10-,11+/m1/s1
;
PRD_900077 InChIKey         InChI                1.03  XXSHXGUAEVMBMC-DEIBAFIGSA-N                                                                                                                          
PRD_900077 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H](O[C@H]2[C@H](O)C(F)(F)[C@@H](F)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O"                                                                 
PRD_900077 SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[CH]2[CH](O)C(F)(F)[CH](F)O[CH]2CO)[CH](O)[CH](O)[CH]1O"                                                                              
PRD_900077 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@H](O[C@@H](C([C@H]2O)(F)F)F)CO)O)O)O)O"                                                             
PRD_900077 SMILES           "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)(F)F)F)CO)O)O)O)O"                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PRD_900077 "SYSTEMATIC NAME" ACDLabs              12.01 "2-deoxy-2,2-difluoro-4-O-alpha-D-glucopyranosyl-alpha-D-arabino-hexopyranosyl fluoride"                                                                              
PRD_900077 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 
;(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[(2~{R},3~{S},4~{S},6~{R})-5,5,6-tris(fluoranyl)-2-(hydroxymethyl)-
 4-oxidanyl-oxan-3-yl]oxy-oxane-3,4,5-triol
;
# 
