data_8C0
#

_chem_comp.id                                   8C0
_chem_comp.name                                 "(1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},3~{S})-3-[(3~{S})-3-(4-hydroxyphenyl)-3-methoxy-propyl]heptan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C36 H54 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "22S-Butyl-25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-06-07
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       550.812
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8C0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5XPM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8C0  O38  O1   O  0  1  N  N  N   7.040  -1.099  32.331  -3.288  -6.783  -0.495  O38  8C0   1  
8C0  C32  C1   C  0  1  Y  N  N   7.648  -1.172  31.078  -3.695  -5.487  -0.449  C32  8C0   2  
8C0  C31  C2   C  0  1  Y  N  N   8.569  -2.198  30.719  -4.034  -4.907   0.765  C31  8C0   3  
8C0  C30  C3   C  0  1  Y  N  N   9.148  -2.213  29.441  -4.446  -3.590   0.809  C30  8C0   4  
8C0  C33  C4   C  0  1  Y  N  N   7.352  -0.181  30.149  -3.767  -4.739  -1.616  C33  8C0   5  
8C0  C34  C5   C  0  1  Y  N  N   7.967  -0.170  28.881  -4.181  -3.422  -1.567  C34  8C0   6  
8C0  C29  C6   C  0  1  Y  N  N   8.844  -1.192  28.496  -4.523  -2.849  -0.356  C29  8C0   7  
8C0  C21  C7   C  0  1  N  N  S   9.498  -1.201  27.131  -4.973  -1.411  -0.305  C21  8C0   8  
8C0  O39  O2   O  0  1  N  N  N   8.506  -1.367  26.123  -5.973  -1.261   0.705  O39  8C0   9  
8C0  C40  C8   C  0  1  N  N  N   7.735  -0.218  25.828  -7.308  -1.460   0.235  C40  8C0  10  
8C0  C20  C9   C  0  1  N  N  N  10.427  -0.011  26.891  -3.779  -0.514   0.022  C20  8C0  11  
8C0  C19  C10  C  0  1  N  N  N  11.568  -0.060  27.922  -4.208   0.953  -0.049  C19  8C0  12  
8C0  C18  C11  C  0  1  N  N  S  12.684   0.934  27.658  -3.051   1.846   0.404  C18  8C0  13  
8C0  C25  C12  C  0  1  N  N  N  13.678   1.035  28.855  -3.518   3.302   0.449  C25  8C0  14  
8C0  C26  C13  C  0  1  N  N  N  14.205  -0.359  29.216  -4.571   3.467   1.546  C26  8C0  15  
8C0  C27  C14  C  0  1  N  N  N  15.631  -0.282  29.754  -5.119   4.895   1.517  C27  8C0  16  
8C0  C28  C15  C  0  1  N  N  N  16.347  -1.598  29.581  -6.172   5.060   2.614  C28  8C0  17  
8C0  C17  C16  C  0  1  N  N  R  12.158   2.321  27.325  -1.889   1.713  -0.582  C17  8C0  18  
8C0  C41  C17  C  0  1  N  N  N  11.339   2.904  28.505  -2.333   2.200  -1.963  C41  8C0  19  
8C0  C16  C18  C  0  1  N  N  R  13.334   3.240  26.897  -0.710   2.559  -0.097  C16  8C0  20  
8C0  C15  C19  C  0  1  N  N  N  14.298   2.590  25.892  -0.283   2.122   1.329  C15  8C0  21  
8C0  C23  C20  C  0  1  N  N  R  13.002   4.628  26.347   0.511   2.312  -0.970  C23  8C0  22  
8C0  C24  C21  C  0  1  N  N  N  11.848   4.639  25.328   0.514   0.855  -1.435  C24  8C0  23  
8C0  C12  C22  C  0  1  N  N  N  12.764   5.746  27.356   0.737   3.217  -2.159  C12  8C0  24  
8C0  C11  C23  C  0  1  N  N  N  12.681   7.079  26.593   1.962   2.683  -2.921  C11  8C0  25  
8C0  C10  C24  C  0  1  N  N  N  13.978   7.372  25.794   3.210   2.654  -2.040  C10  8C0  26  
8C0  C22  C25  C  0  1  N  N  S  14.338   4.956  25.676   1.699   2.522   0.013  C22  8C0  27  
8C0  C14  C26  C  0  1  N  N  N  14.832   3.689  24.981   1.219   1.730   1.235  C14  8C0  28  
8C0  C9   C27  C  0  1  N  N  N  14.258   6.211  24.900   2.908   1.995  -0.701  C9   8C0  29  
8C0  C8   C28  C  0  1  N  N  N  14.394   6.241  23.567   3.662   1.022  -0.201  C8   8C0  30  
8C0  C7   C29  C  0  1  N  N  N  14.261   7.477  22.817   4.838   0.546  -0.946  C7   8C0  31  
8C0  C6   C30  C  0  1  N  N  N  14.070   7.488  21.482   5.530  -0.496  -0.499  C6   8C0  32  
8C0  C1   C31  C  0  1  N  N  N  13.873   8.844  20.874   6.818  -0.911  -1.174  C1   8C0  33  
8C0  C5   C32  C  0  1  N  N  N  14.018   6.253  20.638   5.049  -1.283   0.698  C5   8C0  34  
8C0  C4   C33  C  0  1  N  N  R  14.506   6.475  19.197   6.169  -1.315   1.746  C4   8C0  35  
8C0  O37  O3   O  0  1  N  N  N  14.067   5.317  18.458   5.838  -2.251   2.774  O37  8C0  36  
8C0  C3   C34  C  0  1  N  N  N  14.076   7.819  18.659   7.453  -1.734   1.067  C3   8C0  37  
8C0  C36  C35  C  0  1  N  N  N  13.421   8.050  17.523   8.136  -2.761   1.508  C36  8C0  38  
8C0  C2   C36  C  0  1  N  N  R  14.470   8.993  19.479   7.934  -0.944  -0.122  C2   8C0  39  
8C0  O35  O4   O  0  1  N  N  N  15.892   9.134  19.538   8.255   0.388   0.285  O35  8C0  40  
8C0  H1   H1   H  0  1  N  N  N   7.326  -1.831  32.865  -4.008  -7.417  -0.618  H1   8C0  41  
8C0  H2   H2   H  0  1  N  N  N   8.823  -2.967  31.433  -3.975  -5.486   1.675  H2   8C0  42  
8C0  H3   H3   H  0  1  N  N  N   9.830  -3.006  29.172  -4.710  -3.138   1.754  H3   8C0  43  
8C0  H4   H4   H  0  1  N  N  N   6.641   0.591  30.403  -3.500  -5.187  -2.562  H4   8C0  44  
8C0  H5   H5   H  0  1  N  N  N   7.759   0.639  28.196  -4.237  -2.840  -2.475  H5   8C0  45  
8C0  H6   H6   H  0  1  N  N  N  10.139  -2.095  27.106  -5.388  -1.126  -1.272  H6   8C0  46  
8C0  H7   H7   H  0  1  N  N  N   7.005  -0.458  25.041  -7.530  -0.734  -0.547  H7   8C0  47  
8C0  H8   H8   H  0  1  N  N  N   7.203   0.109  26.734  -7.406  -2.469  -0.166  H8   8C0  48  
8C0  H9   H9   H  0  1  N  N  N   8.397   0.588  25.480  -8.007  -1.329   1.061  H9   8C0  49  
8C0  H10  H10  H  0  1  N  N  N  10.844  -0.066  25.875  -3.419  -0.739   1.026  H10  8C0  50  
8C0  H11  H11  H  0  1  N  N  N   9.864   0.927  27.006  -2.981  -0.694  -0.698  H11  8C0  51  
8C0  H12  H12  H  0  1  N  N  N  11.145   0.151  28.915  -4.480   1.203  -1.074  H12  8C0  52  
8C0  H13  H13  H  0  1  N  N  N  11.998  -1.072  27.914  -5.067   1.112   0.604  H13  8C0  53  
8C0  H14  H14  H  0  1  N  N  N  13.255   0.575  26.789  -2.722   1.539   1.397  H14  8C0  54  
8C0  H15  H15  H  0  1  N  N  N  14.522   1.682  28.574  -2.667   3.950   0.661  H15  8C0  55  
8C0  H16  H16  H  0  1  N  N  N  13.159   1.465  29.724  -3.950   3.575  -0.514  H16  8C0  56  
8C0  H17  H17  H  0  1  N  N  N  13.554  -0.802  29.984  -5.386   2.762   1.376  H17  8C0  57  
8C0  H18  H18  H  0  1  N  N  N  14.194  -0.992  28.316  -4.118   3.271   2.517  H18  8C0  58  
8C0  H19  H19  H  0  1  N  N  N  16.179   0.500  29.208  -4.304   5.600   1.686  H19  8C0  59  
8C0  H20  H20  H  0  1  N  N  N  15.598  -0.028  30.824  -5.572   5.091   0.546  H20  8C0  60  
8C0  H21  H21  H  0  1  N  N  N  17.370  -1.514  29.976  -6.562   6.078   2.594  H21  8C0  61  
8C0  H22  H22  H  0  1  N  N  N  15.806  -2.384  30.128  -6.986   4.355   2.445  H22  8C0  62  
8C0  H23  H23  H  0  1  N  N  N  16.387  -1.856  28.512  -5.718   4.864   3.586  H23  8C0  63  
8C0  H24  H24  H  0  1  N  N  N  11.480   2.228  26.464  -1.584   0.668  -0.646  H24  8C0  64  
8C0  H25  H25  H  0  1  N  N  N  10.523   2.213  28.763  -2.637   3.245  -1.899  H25  8C0  65  
8C0  H26  H26  H  0  1  N  N  N  11.996   3.037  29.377  -1.504   2.105  -2.665  H26  8C0  66  
8C0  H27  H27  H  0  1  N  N  N  10.916   3.877  28.213  -3.173   1.597  -2.308  H27  8C0  67  
8C0  H28  H28  H  0  1  N  N  N  13.924   3.411  27.810  -0.974   3.616  -0.106  H28  8C0  68  
8C0  H29  H29  H  0  1  N  N  N  13.764   1.836  25.295  -0.412   2.949   2.027  H29  8C0  69  
8C0  H30  H30  H  0  1  N  N  N  15.131   2.111  26.428  -0.875   1.265   1.650  H30  8C0  70  
8C0  H31  H31  H  0  1  N  N  N  10.904   4.400  25.840  -0.314   0.693  -2.126  H31  8C0  71  
8C0  H32  H32  H  0  1  N  N  N  11.774   5.636  24.869   1.456   0.636  -1.939  H32  8C0  72  
8C0  H33  H33  H  0  1  N  N  N  12.041   3.889  24.547   0.401   0.198  -0.573  H33  8C0  73  
8C0  H34  H34  H  0  1  N  N  N  11.821   5.567  27.894  -0.138   3.200  -2.808  H34  8C0  74  
8C0  H35  H35  H  0  1  N  N  N  13.596   5.781  28.075   0.927   4.235  -1.819  H35  8C0  75  
8C0  H36  H36  H  0  1  N  N  N  12.517   7.892  27.315   1.751   1.673  -3.270  H36  8C0  76  
8C0  H37  H37  H  0  1  N  N  N  11.834   7.035  25.892   2.152   3.324  -3.782  H37  8C0  77  
8C0  H38  H38  H  0  1  N  N  N  14.818   7.515  26.490   3.995   2.094  -2.547  H38  8C0  78  
8C0  H39  H39  H  0  1  N  N  N  13.844   8.281  25.190   3.551   3.675  -1.867  H39  8C0  79  
8C0  H40  H40  H  0  1  N  N  N  15.047   5.144  26.496   1.817   3.577   0.260  H40  8C0  80  
8C0  H41  H41  H  0  1  N  N  N  14.416   3.603  23.967   1.757   2.040   2.131  H41  8C0  81  
8C0  H42  H42  H  0  1  N  N  N  15.931   3.665  24.930   1.328   0.659   1.068  H42  8C0  82  
8C0  H43  H43  H  0  1  N  N  N  14.608   5.324  23.038   3.412   0.581   0.753  H43  8C0  83  
8C0  H44  H44  H  0  1  N  N  N  14.317   8.418  23.345   5.137   1.043  -1.857  H44  8C0  84  
8C0  H45  H45  H  0  1  N  N  N  14.343   9.589  21.532   6.698  -1.902  -1.612  H45  8C0  85  
8C0  H46  H46  H  0  1  N  N  N  12.793   9.040  20.810   7.069  -0.194  -1.955  H46  8C0  86  
8C0  H47  H47  H  0  1  N  N  N  12.977   5.899  20.603   4.166  -0.803   1.121  H47  8C0  87  
8C0  H48  H48  H  0  1  N  N  N  14.651   5.485  21.106   4.801  -2.300   0.393  H48  8C0  88  
8C0  H49  H49  H  0  1  N  N  N  15.606   6.469  19.224   6.291  -0.323   2.181  H49  8C0  89  
8C0  H50  H50  H  0  1  N  N  N  14.391   4.530  18.880   6.504  -2.322   3.471  H50  8C0  90  
8C0  H51  H51  H  0  1  N  N  N  13.194   9.064  17.227   7.783  -3.317   2.365  H51  8C0  91  
8C0  H52  H52  H  0  1  N  N  N  13.116   7.224  16.898   9.052  -3.052   1.016  H52  8C0  92  
8C0  H53  H53  H  0  1  N  N  N  14.038   9.895  19.022   8.818  -1.421  -0.545  H53  8C0  93  
8C0  H54  H54  H  0  1  N  N  N  16.114   9.891  20.068   8.948   0.437   0.958  H54  8C0  94  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8C0  C36  C3   DOUB  N  N   1  
8C0  O37  C4   SING  N  N   2  
8C0  C3   C4   SING  N  N   3  
8C0  C3   C2   SING  N  N   4  
8C0  C4   C5   SING  N  N   5  
8C0  C2   O35  SING  N  N   6  
8C0  C2   C1   SING  N  N   7  
8C0  C5   C6   SING  N  N   8  
8C0  C1   C6   SING  N  N   9  
8C0  C6   C7   DOUB  N  N  10  
8C0  C7   C8   SING  N  N  11  
8C0  C8   C9   DOUB  N  E  12  
8C0  C9   C22  SING  N  N  13  
8C0  C9   C10  SING  N  N  14  
8C0  C14  C22  SING  N  N  15  
8C0  C14  C15  SING  N  N  16  
8C0  C24  C23  SING  N  N  17  
8C0  C22  C23  SING  N  N  18  
8C0  C10  C11  SING  N  N  19  
8C0  C40  O39  SING  N  N  20  
8C0  C15  C16  SING  N  N  21  
8C0  O39  C21  SING  N  N  22  
8C0  C23  C16  SING  N  N  23  
8C0  C23  C12  SING  N  N  24  
8C0  C11  C12  SING  N  N  25  
8C0  C20  C21  SING  N  N  26  
8C0  C20  C19  SING  N  N  27  
8C0  C16  C17  SING  N  N  28  
8C0  C21  C29  SING  N  N  29  
8C0  C17  C18  SING  N  N  30  
8C0  C17  C41  SING  N  N  31  
8C0  C18  C19  SING  N  N  32  
8C0  C18  C25  SING  N  N  33  
8C0  C29  C34  DOUB  Y  N  34  
8C0  C29  C30  SING  Y  N  35  
8C0  C25  C26  SING  N  N  36  
8C0  C34  C33  SING  Y  N  37  
8C0  C26  C27  SING  N  N  38  
8C0  C30  C31  DOUB  Y  N  39  
8C0  C28  C27  SING  N  N  40  
8C0  C33  C32  DOUB  Y  N  41  
8C0  C31  C32  SING  Y  N  42  
8C0  C32  O38  SING  N  N  43  
8C0  O38  H1   SING  N  N  44  
8C0  C31  H2   SING  N  N  45  
8C0  C30  H3   SING  N  N  46  
8C0  C33  H4   SING  N  N  47  
8C0  C34  H5   SING  N  N  48  
8C0  C21  H6   SING  N  N  49  
8C0  C40  H7   SING  N  N  50  
8C0  C40  H8   SING  N  N  51  
8C0  C40  H9   SING  N  N  52  
8C0  C20  H10  SING  N  N  53  
8C0  C20  H11  SING  N  N  54  
8C0  C19  H12  SING  N  N  55  
8C0  C19  H13  SING  N  N  56  
8C0  C18  H14  SING  N  N  57  
8C0  C25  H15  SING  N  N  58  
8C0  C25  H16  SING  N  N  59  
8C0  C26  H17  SING  N  N  60  
8C0  C26  H18  SING  N  N  61  
8C0  C27  H19  SING  N  N  62  
8C0  C27  H20  SING  N  N  63  
8C0  C28  H21  SING  N  N  64  
8C0  C28  H22  SING  N  N  65  
8C0  C28  H23  SING  N  N  66  
8C0  C17  H24  SING  N  N  67  
8C0  C41  H25  SING  N  N  68  
8C0  C41  H26  SING  N  N  69  
8C0  C41  H27  SING  N  N  70  
8C0  C16  H28  SING  N  N  71  
8C0  C15  H29  SING  N  N  72  
8C0  C15  H30  SING  N  N  73  
8C0  C24  H31  SING  N  N  74  
8C0  C24  H32  SING  N  N  75  
8C0  C24  H33  SING  N  N  76  
8C0  C12  H34  SING  N  N  77  
8C0  C12  H35  SING  N  N  78  
8C0  C11  H36  SING  N  N  79  
8C0  C11  H37  SING  N  N  80  
8C0  C10  H38  SING  N  N  81  
8C0  C10  H39  SING  N  N  82  
8C0  C22  H40  SING  N  N  83  
8C0  C14  H41  SING  N  N  84  
8C0  C14  H42  SING  N  N  85  
8C0  C8   H43  SING  N  N  86  
8C0  C7   H44  SING  N  N  87  
8C0  C1   H45  SING  N  N  88  
8C0  C1   H46  SING  N  N  89  
8C0  C5   H47  SING  N  N  90  
8C0  C5   H48  SING  N  N  91  
8C0  C4   H49  SING  N  N  92  
8C0  O37  H50  SING  N  N  93  
8C0  C36  H51  SING  N  N  94  
8C0  C36  H52  SING  N  N  95  
8C0  C2   H53  SING  N  N  96  
8C0  O35  H54  SING  N  N  97  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8C0  InChI             InChI                 1.03   "InChI=1S/C36H54O4/c1-6-7-9-27(15-20-35(40-5)29-13-16-30(37)17-14-29)24(2)31-18-19-32-28(10-8-21-36(31,32)4)12-11-26-22-33(38)25(3)34(39)23-26/h11-14,16-17,24,27,31-35,37-39H,3,6-10,15,18-23H2,1-2,4-5H3/b28-12+/t24-,27+,31-,32+,33-,34-,35+,36-/m1/s1"  
8C0  InChIKey          InChI                 1.03   AJZMBYIVQYCFHK-WPVJRCGCSA-N  
8C0  SMILES_CANONICAL  CACTVS                3.385  "CCCC[C@@H](CC[C@H](OC)c1ccc(O)cc1)[C@@H](C)[C@H]2CC[C@H]3C(/CCC[C@]23C)=C/C=C/4C[C@@H](O)C(=C)[C@H](O)C/4"  
8C0  SMILES            CACTVS                3.385  "CCCC[CH](CC[CH](OC)c1ccc(O)cc1)[CH](C)[CH]2CC[CH]3C(CCC[C]23C)=CC=C4C[CH](O)C(=C)[CH](O)C4"  
8C0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCCC[C@@H](CC[C@@H](c1ccc(cc1)O)OC)[C@@H](C)[C@H]2CC[C@@H]\3[C@@]2(CCC/C3=C\C=C4C[C@H](C(=C)[C@@H](C4)O)O)C"  
8C0  SMILES            "OpenEye OEToolkits"  2.0.6  "CCCCC(CCC(c1ccc(cc1)O)OC)C(C)C2CCC3C2(CCCC3=CC=C4CC(C(=C)C(C4)O)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          8C0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},3~{S})-3-[(3~{S})-3-(4-hydroxyphenyl)-3-methoxy-propyl]heptan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8C0  "Create component"  2017-06-07  PDBJ  
8C0  "Initial release"   2018-06-06  RCSB  
8C0  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8C0
_pdbx_chem_comp_synonyms.name        "22S-Butyl-25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
