data_8D0
#

_chem_comp.id                                   8D0
_chem_comp.name                                 "(6~{a}~{R},9~{R},10~{a}~{R})-9-(hydroxymethyl)-3-(8-isothiocyanato-2-methyl-octan-2-yl)-6,6-dimethyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H39 N O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-06-12
_chem_comp.pdbx_modified_date                   2020-01-16
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       445.658
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8D0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5XR8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8D0  C1   C1   C  0  1  Y  N  N  -42.678  -157.964  308.565  -1.435   1.989  -0.299  C1   8D0   1  
8D0  C2   C2   C  0  1  Y  N  N  -42.185  -157.808  307.250  -0.344   1.187  -0.029  C2   8D0   2  
8D0  C3   C3   C  0  1  Y  N  N  -41.225  -158.728  306.787  -0.528  -0.128   0.352  C3   8D0   3  
8D0  C4   C4   C  0  1  Y  N  N  -40.767  -159.781  307.599  -1.812  -0.640   0.467  C4   8D0   4  
8D0  C5   C5   C  0  1  Y  N  N  -41.266  -159.937  308.922  -2.911   0.164   0.201  C5   8D0   5  
8D0  N1   N1   N  0  1  N  N  N  -49.883  -159.610  305.995   9.325  -0.845   0.873  N1   8D0   6  
8D0  C10  C6   C  0  1  N  N  N  -40.860  -162.472  309.213  -4.374  -1.852  -0.108  C10  8D0   7  
8D0  C11  C7   C  0  1  N  N  R  -40.386  -163.598  310.154  -5.798  -2.366   0.135  C11  8D0   8  
8D0  C12  C8   C  0  1  N  N  N  -41.153  -163.564  311.492  -6.805  -1.512  -0.634  C12  8D0   9  
8D0  C13  C9   C  0  1  N  N  N  -41.128  -162.161  312.122  -6.693  -0.045  -0.204  C13  8D0  10  
8D0  C14  C10  C  0  1  N  N  N  -40.513  -164.953  309.434  -5.900  -3.818  -0.335  C14  8D0  11  
8D0  C15  C11  C  0  1  N  N  N  -40.887  -158.894  312.040  -5.257   2.070   1.413  C15  8D0  12  
8D0  C16  C12  C  0  1  N  N  N  -43.037  -159.836  312.927  -6.121   2.764  -0.831  C16  8D0  13  
8D0  C17  C13  C  0  1  N  N  N  -42.646  -156.676  306.315   1.049   1.747  -0.150  C17  8D0  14  
8D0  C18  C14  C  0  1  N  N  N  -43.870  -157.135  305.473   2.068   0.661   0.202  C18  8D0  15  
8D0  C19  C15  C  0  1  N  N  N  -41.528  -156.222  305.351   1.285   2.222  -1.586  C19  8D0  16  
8D0  C20  C16  C  0  1  N  N  N  -43.035  -155.439  307.155   1.210   2.928   0.810  C20  8D0  17  
8D0  C21  C17  C  0  1  N  N  N  -45.148  -157.478  306.270   3.483   1.230   0.078  C21  8D0  18  
8D0  C22  C18  C  0  1  N  N  N  -46.437  -157.247  305.470   4.502   0.144   0.430  C22  8D0  19  
8D0  C23  C19  C  0  1  N  N  N  -46.680  -158.341  304.420   5.917   0.712   0.307  C23  8D0  20  
8D0  C24  C20  C  0  1  N  N  N  -48.121  -158.874  304.455   6.935  -0.374   0.659  C24  8D0  21  
8D0  C25  C21  C  0  1  N  N  N  -48.463  -159.601  305.766   8.350   0.195   0.536  C25  8D0  22  
8D0  C6   C22  C  0  1  Y  N  N  -42.235  -159.011  309.392  -2.726   1.482  -0.190  C6   8D0  23  
8D0  C7   C23  C  0  1  N  N  R  -40.823  -161.065  309.859  -4.295  -0.399   0.349  C7   8D0  24  
8D0  C8   C24  C  0  1  N  N  R  -41.720  -161.149  311.119  -5.272   0.437  -0.482  C8   8D0  25  
8D0  C9   C25  C  0  1  N  N  N  -42.113  -159.763  311.692  -5.088   1.905  -0.099  C9   8D0  26  
8D0  O1   O1   O  0  1  N  N  N  -42.791  -159.059  310.652  -3.769   2.303  -0.479  O1   8D0  27  
8D0  O2   O2   O  0  1  N  N  N  -40.569  -164.744  308.038  -7.190  -4.336  -0.003  O2   8D0  28  
8D0  O3   O3   O  0  1  N  N  N  -39.835  -160.613  307.049  -1.995  -1.934   0.841  O3   8D0  29  
8D0  H1   H1   H  0  1  N  N  N  -43.410  -157.265  308.942  -1.285   3.017  -0.593  H1   8D0  30  
8D0  H2   H2   H  0  1  N  N  N  -40.832  -158.623  305.787   0.326  -0.756   0.560  H2   8D0  31  
8D0  H6   H6   H  0  1  N  N  N  -41.895  -162.687  308.908  -3.666  -2.454   0.461  H6   8D0  32  
8D0  H7   H7   H  0  1  N  N  N  -40.210  -162.464  308.326  -4.139  -1.914  -1.171  H7   8D0  33  
8D0  H8   H8   H  0  1  N  N  N  -39.321  -163.430  310.372  -6.022  -2.316   1.201  H8   8D0  34  
8D0  H9   H9   H  0  1  N  N  N  -42.198  -163.856  311.312  -6.605  -1.592  -1.703  H9   8D0  35  
8D0  H10  H10  H  0  1  N  N  N  -40.688  -164.277  312.189  -7.814  -1.872  -0.431  H10  8D0  36  
8D0  H11  H11  H  0  1  N  N  N  -40.091  -161.882  312.359  -7.402   0.558  -0.773  H11  8D0  37  
8D0  H12  H12  H  0  1  N  N  N  -41.728  -162.160  313.044  -6.911   0.042   0.860  H12  8D0  38  
8D0  H13  H13  H  0  1  N  N  N  -41.432  -165.459  309.766  -5.758  -3.861  -1.415  H13  8D0  39  
8D0  H14  H14  H  0  1  N  N  N  -39.642  -165.579  309.676  -5.132  -4.414   0.157  H14  8D0  40  
8D0  H15  H15  H  0  1  N  N  N  -40.310  -159.377  312.842  -4.511   1.466   1.930  H15  8D0  41  
8D0  H16  H16  H  0  1  N  N  N  -40.252  -158.782  311.149  -5.125   3.118   1.681  H16  8D0  42  
8D0  H17  H17  H  0  1  N  N  N  -41.224  -157.903  312.377  -6.255   1.743   1.705  H17  8D0  43  
8D0  H18  H18  H  0  1  N  N  N  -42.526  -160.377  313.737  -7.125   2.441  -0.553  H18  8D0  44  
8D0  H19  H19  H  0  1  N  N  N  -43.280  -158.817  313.263  -5.986   3.810  -0.554  H19  8D0  45  
8D0  H20  H20  H  0  1  N  N  N  -43.964  -160.366  312.661  -5.989   2.653  -1.907  H20  8D0  46  
8D0  H21  H21  H  0  1  N  N  N  -43.574  -158.032  304.909   1.900   0.323   1.224  H21  8D0  47  
8D0  H22  H22  H  0  1  N  N  N  -44.118  -156.326  304.771   1.954  -0.180  -0.482  H22  8D0  48  
8D0  H23  H23  H  0  1  N  N  N  -40.653  -155.894  305.932   2.293   2.627  -1.673  H23  8D0  49  
8D0  H24  H24  H  0  1  N  N  N  -41.242  -157.061  304.700   1.171   1.381  -2.270  H24  8D0  50  
8D0  H25  H25  H  0  1  N  N  N  -41.893  -155.388  304.734   0.560   2.996  -1.836  H25  8D0  51  
8D0  H26  H26  H  0  1  N  N  N  -43.833  -155.711  307.862   1.042   2.589   1.832  H26  8D0  52  
8D0  H27  H27  H  0  1  N  N  N  -42.156  -155.084  307.713   2.218   3.333   0.722  H27  8D0  53  
8D0  H28  H28  H  0  1  N  N  N  -43.393  -154.641  306.488   0.485   3.701   0.559  H28  8D0  54  
8D0  H29  H29  H  0  1  N  N  N  -45.178  -156.848  307.171   3.651   1.568  -0.944  H29  8D0  55  
8D0  H30  H30  H  0  1  N  N  N  -45.104  -158.537  306.564   3.598   2.070   0.762  H30  8D0  56  
8D0  H31  H31  H  0  1  N  N  N  -46.366  -156.276  304.958   4.334  -0.194   1.453  H31  8D0  57  
8D0  H32  H32  H  0  1  N  N  N  -47.287  -157.232  306.168   4.387  -0.697  -0.254  H32  8D0  58  
8D0  H33  H33  H  0  1  N  N  N  -45.990  -159.175  304.612   6.085   1.050  -0.715  H33  8D0  59  
8D0  H34  H34  H  0  1  N  N  N  -46.481  -157.924  303.422   6.031   1.553   0.991  H34  8D0  60  
8D0  H35  H35  H  0  1  N  N  N  -48.811  -158.026  304.335   6.767  -0.712   1.681  H35  8D0  61  
8D0  H36  H36  H  0  1  N  N  N  -48.255  -159.577  303.620   6.821  -1.215  -0.025  H36  8D0  62  
8D0  H37  H37  H  0  1  N  N  N  -48.102  -160.638  305.707   8.465   1.036   1.220  H37  8D0  63  
8D0  H38  H38  H  0  1  N  N  N  -47.967  -159.087  306.602   8.518   0.533  -0.487  H38  8D0  64  
8D0  H39  H39  H  0  1  N  N  N  -39.792  -160.863  310.184  -4.592  -0.339   1.396  H39  8D0  65  
8D0  H40  H40  H  0  1  N  N  N  -42.663  -161.598  310.774  -5.049   0.309  -1.541  H40  8D0  66  
8D0  H41  H41  H  0  1  N  N  N  -40.647  -165.581  307.595  -7.326  -5.255  -0.273  H41  8D0  67  
8D0  H42  H42  H  0  1  N  N  N  -39.597  -161.283  307.679  -2.071  -2.060   1.797  H42  8D0  68  
8D0  C26  C26  C  0  1  N  N  N        ?         ?        ?  10.173  -1.205   0.027  C26  8D0  69  
8D0  S1   S1   S  0  1  N  N  N        ?         ?        ?  11.227  -1.651  -1.023  S1   8D0  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8D0  C23  C24  SING  N  N   1  
8D0  C23  C22  SING  N  N   2  
8D0  C24  C25  SING  N  N   3  
8D0  C19  C17  SING  N  N   4  
8D0  C22  C21  SING  N  N   5  
8D0  C18  C21  SING  N  N   6  
8D0  C18  C17  SING  N  N   7  
8D0  C25  N1   SING  N  N   8  
8D0  C17  C20  SING  N  N   9  
8D0  C17  C2   SING  N  N  10  
8D0  C3   C2   DOUB  Y  N  11  
8D0  C3   C4   SING  Y  N  12  
8D0  O3   C4   SING  N  N  13  
8D0  C2   C1   SING  Y  N  14  
8D0  C4   C5   DOUB  Y  N  15  
8D0  O2   C14  SING  N  N  16  
8D0  C1   C6   DOUB  Y  N  17  
8D0  C5   C6   SING  Y  N  18  
8D0  C5   C7   SING  N  N  19  
8D0  C10  C7   SING  N  N  20  
8D0  C10  C11  SING  N  N  21  
8D0  C6   O1   SING  N  N  22  
8D0  C14  C11  SING  N  N  23  
8D0  C7   C8   SING  N  N  24  
8D0  C11  C12  SING  N  N  25  
8D0  O1   C9   SING  N  N  26  
8D0  C8   C9   SING  N  N  27  
8D0  C8   C13  SING  N  N  28  
8D0  C12  C13  SING  N  N  29  
8D0  C9   C15  SING  N  N  30  
8D0  C9   C16  SING  N  N  31  
8D0  C1   H1   SING  N  N  32  
8D0  C3   H2   SING  N  N  33  
8D0  C10  H6   SING  N  N  34  
8D0  C10  H7   SING  N  N  35  
8D0  C11  H8   SING  N  N  36  
8D0  C12  H9   SING  N  N  37  
8D0  C12  H10  SING  N  N  38  
8D0  C13  H11  SING  N  N  39  
8D0  C13  H12  SING  N  N  40  
8D0  C14  H13  SING  N  N  41  
8D0  C14  H14  SING  N  N  42  
8D0  C15  H15  SING  N  N  43  
8D0  C15  H16  SING  N  N  44  
8D0  C15  H17  SING  N  N  45  
8D0  C16  H18  SING  N  N  46  
8D0  C16  H19  SING  N  N  47  
8D0  C16  H20  SING  N  N  48  
8D0  C18  H21  SING  N  N  49  
8D0  C18  H22  SING  N  N  50  
8D0  C19  H23  SING  N  N  51  
8D0  C19  H24  SING  N  N  52  
8D0  C19  H25  SING  N  N  53  
8D0  C20  H26  SING  N  N  54  
8D0  C20  H27  SING  N  N  55  
8D0  C20  H28  SING  N  N  56  
8D0  C21  H29  SING  N  N  57  
8D0  C21  H30  SING  N  N  58  
8D0  C22  H31  SING  N  N  59  
8D0  C22  H32  SING  N  N  60  
8D0  C23  H33  SING  N  N  61  
8D0  C23  H34  SING  N  N  62  
8D0  C24  H35  SING  N  N  63  
8D0  C24  H36  SING  N  N  64  
8D0  C25  H37  SING  N  N  65  
8D0  C25  H38  SING  N  N  66  
8D0  C7   H39  SING  N  N  67  
8D0  C8   H40  SING  N  N  68  
8D0  O2   H41  SING  N  N  69  
8D0  O3   H42  SING  N  N  70  
8D0  N1   C26  DOUB  N  N  71  
8D0  C26  S1   DOUB  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8D0  InChI             InChI                 1.03   "InChI=1S/C26H39NO3S/c1-25(2,11-7-5-6-8-12-27-17-31)19-14-22(29)24-20-13-18(16-28)9-10-21(20)26(3,4)30-23(24)15-19/h14-15,18,20-21,28-29H,5-13,16H2,1-4H3/t18-,20-,21-/m1/s1"  
8D0  InChIKey          InChI                 1.03   JCIYJYHFBBXSBF-HMXCVIKNSA-N  
8D0  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(CCCCCCN=C=S)c1cc(O)c2[C@@H]3C[C@H](CO)CC[C@H]3C(C)(C)Oc2c1"  
8D0  SMILES            CACTVS                3.385  "CC(C)(CCCCCCN=C=S)c1cc(O)c2[CH]3C[CH](CO)CC[CH]3C(C)(C)Oc2c1"  
8D0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1([C@@H]2CC[C@H](C[C@H]2c3c(cc(cc3O1)C(C)(C)CCCCCCN=C=S)O)CO)C"  
8D0  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(C2CCC(CC2c3c(cc(cc3O1)C(C)(C)CCCCCCN=C=S)O)CO)C"  
#
_pdbx_chem_comp_identifier.comp_id          8D0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(6~{a}~{R},9~{R},10~{a}~{R})-9-(hydroxymethyl)-3-(8-isothiocyanato-2-methyl-octan-2-yl)-6,6-dimethyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8D0  "Create component"               2017-06-12  PDBJ  
8D0  "Initial release"                2017-07-12  RCSB  
8D0  "Modify model coordinates code"  2020-01-16  PDBJ  
##
