data_EL0
# 
_chem_comp.id                                    EL0 
_chem_comp.name                                  "(6S)-1-(3-chloranyl-4-methoxy-phenyl)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]piperidin-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H32 Cl N5 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-21 
_chem_comp.pdbx_modified_date                    2022-07-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        598.113 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     EL0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7XI0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
EL0 CBO C1  C  0 1 N N N 8.324  -8.468 -8.509  5.346  -0.135 3.487  CBO EL0 1  
EL0 OBN O1  O  0 1 N N N 7.226  -7.531 -8.484  5.191  -0.463 2.104  OBN EL0 2  
EL0 CBJ C2  C  0 1 Y N N 6.917  -6.878 -9.611  4.372  0.336  1.369  CBJ EL0 3  
EL0 CBK C3  C  0 1 Y N N 5.921  -5.920 -9.459  4.176  0.074  0.019  CBK EL0 4  
EL0 CL  CL1 CL 0 0 N N N 5.272  -5.590 -7.879  4.977  -1.273 -0.729 CL  EL0 5  
EL0 CBL C4  C  0 1 Y N N 5.588  -5.153 -10.574 3.344  0.885  -0.728 CBL EL0 6  
EL0 CBI C5  C  0 1 Y N N 7.423  -7.173 -10.889 3.728  1.408  1.968  CBI EL0 7  
EL0 CBH C6  C  0 1 Y N N 7.078  -6.402 -12.006 2.891  2.216  1.223  CBH EL0 8  
EL0 CBG C7  C  0 1 Y N N 6.094  -5.437 -11.864 2.704  1.962  -0.129 CBG EL0 9  
EL0 NBA N1  N  0 1 N N N 5.752  -4.664 -12.962 1.855  2.781  -0.885 NBA EL0 10 
EL0 CAZ C8  C  0 1 N N N 4.580  -4.900 -13.590 2.404  3.544  -1.832 CAZ EL0 11 
EL0 OBF O2  O  0 1 N N N 3.830  -5.730 -13.094 3.609  3.520  -1.962 OBF EL0 12 
EL0 CAY C9  C  0 1 N N N 4.180  -4.105 -14.736 1.608  4.431  -2.745 CAY EL0 13 
EL0 CAX C10 C  0 1 N N N 5.378  -3.816 -15.521 0.212  4.661  -2.162 CAX EL0 14 
EL0 CAW C11 C  0 1 N N N 6.336  -2.830 -14.770 -0.377 3.302  -1.763 CAW EL0 15 
EL0 CAR C12 C  0 1 N N S 6.797  -3.678 -13.511 0.428  2.742  -0.592 CAR EL0 16 
EL0 CAO C13 C  0 1 Y N N 7.380  -2.783 -12.516 0.005  1.319  -0.332 CAO EL0 17 
EL0 NAP N2  N  0 1 Y N N 6.700  -1.871 -11.852 0.341  0.297  -1.063 NAP EL0 18 
EL0 CAL C14 C  0 1 Y N N 7.544  -1.202 -11.010 -0.209 -0.833 -0.548 CAL EL0 19 
EL0 CAM C15 C  0 1 Y N N 7.325  -0.175 -10.108 -0.175 -2.177 -0.925 CAM EL0 20 
EL0 CAH C16 C  0 1 Y N N 8.337  0.363  -9.315  -0.861 -3.116 -0.169 CAH EL0 21 
EL0 CAA C17 C  0 1 Y N N 8.140  1.405  -8.399  -0.829 -4.548 -0.562 CAA EL0 22 
EL0 CAE C18 C  0 1 Y N N 7.472  2.564  -8.672  -1.333 -5.123 -1.693 CAE EL0 23 
EL0 CAF C19 C  0 1 N N N 6.878  3.015  -9.972  -2.048 -4.426 -2.821 CAF EL0 24 
EL0 OAD O3  O  0 1 Y N N 7.389  3.333  -7.630  -1.063 -6.433 -1.600 OAD EL0 25 
EL0 NAC N3  N  0 1 Y N N 8.061  2.611  -6.552  -0.476 -6.699 -0.578 NAC EL0 26 
EL0 CAB C20 C  0 1 Y N N 8.487  1.467  -7.098  -0.262 -5.642 0.149  CAB EL0 27 
EL0 CAG C21 C  0 1 N N N 9.224  0.496  -6.255  0.443  -5.588 1.480  CAG EL0 28 
EL0 CAI C22 C  0 1 Y N N 9.599  -0.245 -9.447  -1.581 -2.720 0.962  CAI EL0 29 
EL0 CAJ C23 C  0 1 Y N N 9.784  -1.277 -10.374 -1.619 -1.407 1.335  CAJ EL0 30 
EL0 CAK C24 C  0 1 Y N N 8.773  -1.754 -11.143 -0.938 -0.451 0.591  CAK EL0 31 
EL0 NAN N4  N  0 1 Y N N 8.667  -2.734 -12.113 -0.778 0.916  0.704  NAN EL0 32 
EL0 CAQ C25 C  0 1 N N R 9.791  -3.625 -12.549 -1.349 1.774  1.745  CAQ EL0 33 
EL0 CAV C26 C  0 1 N N N 10.884 -2.734 -13.022 -2.516 2.625  1.185  CAV EL0 34 
EL0 CAS C27 C  0 1 N N N 10.282 -4.519 -11.411 -2.072 0.929  2.827  CAS EL0 35 
EL0 CAT C28 C  0 1 N N N 11.759 -4.562 -11.631 -3.458 0.673  2.197  CAT EL0 36 
EL0 NAU N5  N  0 1 N N N 12.045 -3.563 -12.679 -3.680 1.721  1.191  NAU EL0 37 
EL0 SBB S1  S  0 1 N N N 13.620 -2.883 -12.987 -5.017 1.863  0.225  SBB EL0 38 
EL0 OBC O4  O  0 1 N N N 14.659 -3.352 -11.968 -6.076 1.335  1.011  OBC EL0 39 
EL0 OBD O5  O  0 1 N N N 13.676 -1.379 -13.294 -5.014 3.226  -0.180 OBD EL0 40 
EL0 CBE C29 C  0 1 N N N 13.930 -3.758 -14.521 -4.672 0.779  -1.188 CBE EL0 41 
EL0 H1  H1  H  0 1 N N N 8.447  -8.916 -7.512  4.376  -0.176 3.981  H1  EL0 42 
EL0 H2  H2  H  0 1 N N N 8.114  -9.260 -9.243  6.023  -0.849 3.955  H2  EL0 43 
EL0 H3  H3  H  0 1 N N N 9.248  -7.942 -8.791  5.758  0.870  3.577  H3  EL0 44 
EL0 H4  H4  H  0 1 N N N 4.921  -4.313 -10.449 3.192  0.681  -1.778 H4  EL0 45 
EL0 H5  H5  H  0 1 N N N 8.092  -8.012 -11.012 3.881  1.611  3.017  H5  EL0 46 
EL0 H6  H6  H  0 1 N N N 7.568  -6.556 -12.956 2.393  3.053  1.689  H6  EL0 47 
EL0 H7  H7  H  0 1 N N N 3.719  -3.165 -14.397 2.117  5.389  -2.854 H7  EL0 48 
EL0 H8  H8  H  0 1 N N N 3.459  -4.667 -15.348 1.518  3.957  -3.722 H8  EL0 49 
EL0 H9  H9  H  0 1 N N N 5.077  -3.363 -16.477 0.284  5.302  -1.284 H9  EL0 50 
EL0 H10 H10 H  0 1 N N N 5.914  -4.757 -15.714 -0.428 5.132  -2.909 H10 EL0 51 
EL0 H11 H11 H  0 1 N N N 7.196  -2.556 -15.400 -1.418 3.428  -1.466 H11 EL0 52 
EL0 H12 H12 H  0 1 N N N 5.803  -1.919 -14.460 -0.314 2.615  -2.606 H12 EL0 53 
EL0 H13 H13 H  0 1 N N N 7.622  -4.305 -13.880 0.233  3.341  0.298  H13 EL0 54 
EL0 H14 H14 H  0 1 N N N 6.327  0.227  -10.015 0.381  -2.483 -1.798 H14 EL0 55 
EL0 H15 H15 H  0 1 N N N 6.424  4.008  -9.843  -1.322 -4.107 -3.569 H15 EL0 56 
EL0 H16 H16 H  0 1 N N N 7.667  3.069  -10.736 -2.763 -5.111 -3.277 H16 EL0 57 
EL0 H17 H17 H  0 1 N N N 6.107  2.298  -10.291 -2.576 -3.555 -2.433 H17 EL0 58 
EL0 H18 H18 H  0 1 N N N 9.316  0.892  -5.233  -0.282 -5.727 2.281  H18 EL0 59 
EL0 H19 H19 H  0 1 N N N 8.676  -0.458 -6.230  1.192  -6.378 1.527  H19 EL0 60 
EL0 H20 H20 H  0 1 N N N 10.227 0.332  -6.676  0.929  -4.619 1.594  H20 EL0 61 
EL0 H21 H21 H  0 1 N N N 10.424 0.085  -8.833  -2.112 -3.458 1.545  H21 EL0 62 
EL0 H22 H22 H  0 1 N N N 10.768 -1.710 -10.481 -2.178 -1.110 2.210  H22 EL0 63 
EL0 H23 H23 H  0 1 N N N 9.450  -4.260 -13.380 -0.582 2.407  2.192  H23 EL0 64 
EL0 H24 H24 H  0 1 N N N 10.892 -1.775 -12.484 -2.701 3.486  1.829  H24 EL0 65 
EL0 H25 H25 H  0 1 N N N 10.820 -2.546 -14.104 -2.293 2.951  0.169  H25 EL0 66 
EL0 H26 H26 H  0 1 N N N 10.041 -4.080 -10.431 -1.547 -0.011 2.998  H26 EL0 67 
EL0 H27 H27 H  0 1 N N N 9.842  -5.525 -11.481 -2.166 1.491  3.757  H27 EL0 68 
EL0 H28 H28 H  0 1 N N N 12.066 -5.564 -11.965 -3.473 -0.308 1.721  H28 EL0 69 
EL0 H29 H29 H  0 1 N N N 12.291 -4.305 -10.703 -4.229 0.723  2.965  H29 EL0 70 
EL0 H30 H30 H  0 1 N N N 13.897 -4.842 -14.338 -4.444 -0.224 -0.829 H30 EL0 71 
EL0 H31 H31 H  0 1 N N N 13.161 -3.487 -15.259 -5.545 0.743  -1.840 H31 EL0 72 
EL0 H32 H32 H  0 1 N N N 14.922 -3.481 -14.907 -3.819 1.168  -1.745 H32 EL0 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
EL0 CAX CAW SING N N 1  
EL0 CAX CAY SING N N 2  
EL0 CAW CAR SING N N 3  
EL0 CAY CAZ SING N N 4  
EL0 CBE SBB SING N N 5  
EL0 CAZ OBF DOUB N N 6  
EL0 CAZ NBA SING N N 7  
EL0 CAR NBA SING N N 8  
EL0 CAR CAO SING N N 9  
EL0 OBD SBB DOUB N N 10 
EL0 CAV NAU SING N N 11 
EL0 CAV CAQ SING N N 12 
EL0 SBB NAU SING N N 13 
EL0 SBB OBC DOUB N N 14 
EL0 NBA CBG SING N N 15 
EL0 NAU CAT SING N N 16 
EL0 CAQ NAN SING N N 17 
EL0 CAQ CAS SING N N 18 
EL0 CAO NAN SING Y N 19 
EL0 CAO NAP DOUB Y N 20 
EL0 NAN CAK SING Y N 21 
EL0 CBH CBG DOUB Y N 22 
EL0 CBH CBI SING Y N 23 
EL0 CBG CBL SING Y N 24 
EL0 NAP CAL SING Y N 25 
EL0 CAT CAS SING N N 26 
EL0 CAK CAL DOUB Y N 27 
EL0 CAK CAJ SING Y N 28 
EL0 CAL CAM SING Y N 29 
EL0 CBI CBJ DOUB Y N 30 
EL0 CBL CBK DOUB Y N 31 
EL0 CAJ CAI DOUB Y N 32 
EL0 CAM CAH DOUB Y N 33 
EL0 CAF CAE SING N N 34 
EL0 CBJ CBK SING Y N 35 
EL0 CBJ OBN SING N N 36 
EL0 CBK CL  SING N N 37 
EL0 CAI CAH SING Y N 38 
EL0 CAH CAA SING N N 39 
EL0 CAE CAA DOUB Y N 40 
EL0 CAE OAD SING Y N 41 
EL0 CBO OBN SING N N 42 
EL0 CAA CAB SING Y N 43 
EL0 OAD NAC SING Y N 44 
EL0 CAB NAC DOUB Y N 45 
EL0 CAB CAG SING N N 46 
EL0 CBO H1  SING N N 47 
EL0 CBO H2  SING N N 48 
EL0 CBO H3  SING N N 49 
EL0 CBL H4  SING N N 50 
EL0 CBI H5  SING N N 51 
EL0 CBH H6  SING N N 52 
EL0 CAY H7  SING N N 53 
EL0 CAY H8  SING N N 54 
EL0 CAX H9  SING N N 55 
EL0 CAX H10 SING N N 56 
EL0 CAW H11 SING N N 57 
EL0 CAW H12 SING N N 58 
EL0 CAR H13 SING N N 59 
EL0 CAM H14 SING N N 60 
EL0 CAF H15 SING N N 61 
EL0 CAF H16 SING N N 62 
EL0 CAF H17 SING N N 63 
EL0 CAG H18 SING N N 64 
EL0 CAG H19 SING N N 65 
EL0 CAG H20 SING N N 66 
EL0 CAI H21 SING N N 67 
EL0 CAJ H22 SING N N 68 
EL0 CAQ H23 SING N N 69 
EL0 CAV H24 SING N N 70 
EL0 CAV H25 SING N N 71 
EL0 CAS H26 SING N N 72 
EL0 CAS H27 SING N N 73 
EL0 CAT H28 SING N N 74 
EL0 CAT H29 SING N N 75 
EL0 CBE H30 SING N N 76 
EL0 CBE H31 SING N N 77 
EL0 CBE H32 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
EL0 InChI            InChI                1.03  "InChI=1S/C29H32ClN5O5S/c1-17-28(18(2)40-32-17)19-8-10-24-23(14-19)31-29(35(24)21-12-13-33(16-21)41(4,37)38)25-6-5-7-27(36)34(25)20-9-11-26(39-3)22(30)15-20/h8-11,14-15,21,25H,5-7,12-13,16H2,1-4H3/t21-,25+/m1/s1" 
EL0 InChIKey         InChI                1.03  WMRFYICILGNXCX-BWKNWUBXSA-N                                                                                                                                                                                          
EL0 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1Cl)N2[C@@H](CCCC2=O)c3nc4cc(ccc4n3[C@@H]5CCN(C5)[S](C)(=O)=O)c6c(C)onc6C"                                                                                                                                
EL0 SMILES           CACTVS               3.385 "COc1ccc(cc1Cl)N2[CH](CCCC2=O)c3nc4cc(ccc4n3[CH]5CCN(C5)[S](C)(=O)=O)c6c(C)onc6C"                                                                                                                                    
EL0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3[C@@H]4CCN(C4)S(=O)(=O)C)[C@@H]5CCCC(=O)N5c6ccc(c(c6)Cl)OC"                                                                                                                            
EL0 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3C4CCN(C4)S(=O)(=O)C)C5CCCC(=O)N5c6ccc(c(c6)Cl)OC"                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           EL0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(6~{S})-1-(3-chloranyl-4-methoxy-phenyl)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3~{R})-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]piperidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
EL0 "Create component" 2022-04-21 PDBJ 
EL0 "Initial release"  2022-07-27 RCSB 
# 
