data_3P1
# 
_chem_comp.id                                    3P1 
_chem_comp.name                                  "8-[(quinolin-2-ylmethyl)amino]adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H21 N7 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-01-25 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        423.425 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3P1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3LDP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3P1 N1   N1   N 0 1 Y N N -6.039 1.131  -35.958 -4.555 3.190  0.389  N1   3P1 1  
3P1 C2   C2   C 0 1 Y N N -6.598 0.067  -36.541 -4.922 1.921  0.377  C2   3P1 2  
3P1 N3   N3   N 0 1 Y N N -5.878 -0.769 -37.277 -4.056 0.937  0.244  N3   3P1 3  
3P1 C4   C4   C 0 1 Y N N -4.744 1.373  -36.101 -3.278 3.538  0.266  C4   3P1 4  
3P1 N5   N5   N 0 1 Y N N -3.619 -1.239 -38.117 -1.632 0.415  -0.036 N5   3P1 5  
3P1 C6   C6   C 0 1 Y N N -2.461 -0.597 -37.956 -0.561 1.262  -0.117 C6   3P1 6  
3P1 N7   N7   N 0 1 Y N N -2.678 0.481  -37.172 -0.969 2.503  -0.023 N7   3P1 7  
3P1 C8   C8   C 0 1 Y N N -3.971 0.507  -36.855 -2.318 2.523  0.122  C8   3P1 8  
3P1 C9   C9   C 0 1 Y N N -4.563 -0.565 -37.445 -2.759 1.189  0.116  C9   3P1 9  
3P1 C10  C10  C 0 1 N N R -3.828 -2.473 -38.908 -1.587 -1.048 -0.100 C10  3P1 10 
3P1 O11  O11  O 0 1 N N N -2.780 -3.419 -38.620 -2.646 -1.547 -0.946 O11  3P1 11 
3P1 C12  C12  C 0 1 N N R -2.784 -4.360 -39.788 -2.826 -2.926 -0.556 C12  3P1 12 
3P1 C13  C13  C 0 1 N N S -3.413 -3.568 -40.955 -2.707 -2.920 0.984  C13  3P1 13 
3P1 C14  C14  C 0 1 N N R -3.629 -2.186 -40.381 -1.873 -1.656 1.291  C14  3P1 14 
3P1 N15  N15  N 0 1 N N N -4.201 2.448  -35.529 -2.903 4.872  0.280  N15  3P1 15 
3P1 N16  N16  N 0 1 N N N -1.308 -0.943 -38.492 0.753  0.868  -0.273 N16  3P1 16 
3P1 C17  C17  C 0 1 N N N -0.130 -0.082 -38.310 1.816  1.874  -0.346 C17  3P1 17 
3P1 C18  C18  C 0 1 Y N N 0.075  0.787  -39.548 3.146  1.188  -0.517 C18  3P1 18 
3P1 N19  N19  N 0 1 Y N N 0.850  1.904  -39.467 3.786  0.762  0.546  N19  3P1 19 
3P1 C20  C20  C 0 1 Y N N -0.328 1.206  -41.897 4.866  0.398  -1.974 C20  3P1 20 
3P1 C21  C21  C 0 1 Y N N -0.521 0.421  -40.771 3.662  1.017  -1.800 C21  3P1 21 
3P1 C22  C22  C 0 1 Y N N 0.459  2.341  -41.803 5.553  -0.053 -0.830 C22  3P1 22 
3P1 C23  C23  C 0 1 Y N N 1.052  2.685  -40.565 4.968  0.148  0.445  C23  3P1 23 
3P1 C24  C24  C 0 1 Y N N 1.849  3.838  -40.469 5.653  -0.301 1.589  C24  3P1 24 
3P1 C25  C25  C 0 1 Y N N 2.061  4.638  -41.603 6.858  -0.918 1.455  C25  3P1 25 
3P1 C26  C26  C 0 1 Y N N 1.471  4.289  -42.830 7.430  -1.115 0.200  C26  3P1 26 
3P1 C27  C27  C 0 1 Y N N 0.667  3.143  -42.926 6.798  -0.693 -0.930 C27  3P1 27 
3P1 C28  C28  C 0 1 N N N -1.373 -4.758 -40.131 -4.208 -3.424 -0.984 C28  3P1 28 
3P1 O29  O29  O 0 1 N N N -0.528 -3.619 -40.040 -4.280 -3.462 -2.411 O29  3P1 29 
3P1 O30  O30  O 0 1 N N N -4.678 -4.151 -41.294 -2.026 -4.091 1.438  O30  3P1 30 
3P1 O31  O31  O 0 1 N N N -4.833 -1.581 -40.948 -0.651 -2.009 1.944  O31  3P1 31 
3P1 H2   H2   H 0 1 N N N -7.654 -0.116 -36.411 -5.970 1.682  0.479  H2   3P1 32 
3P1 H10  H10  H 0 1 N N N -4.836 -2.842 -38.667 -0.617 -1.381 -0.470 H10  3P1 33 
3P1 H12  H12  H 0 1 N N N -3.344 -5.282 -39.572 -2.047 -3.549 -0.995 H12  3P1 34 
3P1 H13  H13  H 0 1 N N N -2.790 -3.562 -41.861 -3.693 -2.848 1.443  H13  3P1 35 
3P1 H14  H14  H 0 1 N N N -2.806 -1.487 -40.589 -2.446 -0.959 1.902  H14  3P1 36 
3P1 HN15 HN15 H 0 0 N N N -4.907 2.956  -35.036 -3.575 5.563  0.380  HN15 3P1 37 
3P1 HN1A HN1A H 0 0 N N N -3.488 2.161  -34.889 -1.967 5.113  0.190  HN1A 3P1 38 
3P1 HN16 HN16 H 0 0 N N N -1.070 -1.828 -38.093 0.973  -0.075 -0.335 HN16 3P1 39 
3P1 H17  H17  H 0 1 N N N -0.283 0.564  -37.433 1.635  2.533  -1.196 H17  3P1 40 
3P1 H17A H17A H 0 0 N N N 0.760  -0.710 -38.155 1.824  2.461  0.572  H17A 3P1 41 
3P1 H20  H20  H 0 1 N N N -0.786 0.935  -42.837 5.283  0.260  -2.961 H20  3P1 42 
3P1 H21  H21  H 0 1 N N N -1.128 -0.470 -40.831 3.109  1.375  -2.656 H21  3P1 43 
3P1 H24  H24  H 0 1 N N N 2.298  4.108  -39.525 5.223  -0.156 2.569  H24  3P1 44 
3P1 H25  H25  H 0 1 N N N 2.678  5.522  -41.533 7.379  -1.261 2.337  H25  3P1 45 
3P1 H26  H26  H 0 1 N N N 1.637  4.905  -43.702 8.388  -1.607 0.123  H26  3P1 46 
3P1 H27  H27  H 0 1 N N N 0.209  2.882  -43.869 7.252  -0.851 -1.897 H27  3P1 47 
3P1 H28  H28  H 0 1 N N N -1.027 -5.529 -39.427 -4.374 -4.424 -0.585 H28  3P1 48 
3P1 H28A H28A H 0 0 N N N -1.342 -5.157 -41.155 -4.973 -2.748 -0.600 H28A 3P1 49 
3P1 HO29 HO29 H 0 0 N N N 0.363  -3.867 -40.256 -5.131 -3.770 -2.753 HO29 3P1 50 
3P1 HO30 HO30 H 0 0 N N N -5.068 -3.666 -42.012 -2.477 -4.918 1.217  HO30 3P1 51 
3P1 HO31 HO31 H 0 0 N N N -4.695 -1.406 -41.872 -0.774 -2.450 2.796  HO31 3P1 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3P1 C2  N1   DOUB Y N 1  
3P1 C4  N1   SING Y N 2  
3P1 N3  C2   SING Y N 3  
3P1 C2  H2   SING N N 4  
3P1 C9  N3   DOUB Y N 5  
3P1 C8  C4   DOUB Y N 6  
3P1 C4  N15  SING N N 7  
3P1 C10 N5   SING N N 8  
3P1 N5  C6   SING Y N 9  
3P1 N5  C9   SING Y N 10 
3P1 N16 C6   SING N N 11 
3P1 C6  N7   DOUB Y N 12 
3P1 N7  C8   SING Y N 13 
3P1 C9  C8   SING Y N 14 
3P1 C14 C10  SING N N 15 
3P1 C10 O11  SING N N 16 
3P1 C10 H10  SING N N 17 
3P1 C12 O11  SING N N 18 
3P1 C13 C12  SING N N 19 
3P1 C28 C12  SING N N 20 
3P1 C12 H12  SING N N 21 
3P1 O30 C13  SING N N 22 
3P1 C13 C14  SING N N 23 
3P1 C13 H13  SING N N 24 
3P1 O31 C14  SING N N 25 
3P1 C14 H14  SING N N 26 
3P1 N15 HN15 SING N N 27 
3P1 N15 HN1A SING N N 28 
3P1 N16 C17  SING N N 29 
3P1 N16 HN16 SING N N 30 
3P1 C18 C17  SING N N 31 
3P1 C17 H17  SING N N 32 
3P1 C17 H17A SING N N 33 
3P1 C21 C18  DOUB Y N 34 
3P1 C18 N19  SING Y N 35 
3P1 C23 N19  DOUB Y N 36 
3P1 C20 C22  DOUB Y N 37 
3P1 C20 C21  SING Y N 38 
3P1 C20 H20  SING N N 39 
3P1 C21 H21  SING N N 40 
3P1 C27 C22  SING Y N 41 
3P1 C22 C23  SING Y N 42 
3P1 C23 C24  SING Y N 43 
3P1 C25 C24  DOUB Y N 44 
3P1 C24 H24  SING N N 45 
3P1 C26 C25  SING Y N 46 
3P1 C25 H25  SING N N 47 
3P1 C27 C26  DOUB Y N 48 
3P1 C26 H26  SING N N 49 
3P1 C27 H27  SING N N 50 
3P1 C28 O29  SING N N 51 
3P1 C28 H28  SING N N 52 
3P1 C28 H28A SING N N 53 
3P1 O29 HO29 SING N N 54 
3P1 O30 HO30 SING N N 55 
3P1 O31 HO31 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3P1 SMILES_CANONICAL CACTVS               3.352 "Nc1ncnc2n([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c(NCc4ccc5ccccc5n4)nc12"                                                                                                                                   
3P1 SMILES           CACTVS               3.352 "Nc1ncnc2n([CH]3O[CH](CO)[CH](O)[CH]3O)c(NCc4ccc5ccccc5n4)nc12"                                                                                                                                         
3P1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)ccc(n2)CNc3nc4c(ncnc4n3[C@H]5[C@@H]([C@@H]([C@H](O5)CO)O)O)N"                                                                                                                               
3P1 SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)ccc(n2)CNc3nc4c(ncnc4n3C5C(C(C(O5)CO)O)O)N"                                                                                                                                                 
3P1 InChI            InChI                1.03  "InChI=1S/C20H21N7O4/c21-17-14-18(24-9-23-17)27(19-16(30)15(29)13(8-28)31-19)20(26-14)22-7-11-6-5-10-3-1-2-4-12(10)25-11/h1-6,9,13,15-16,19,28-30H,7-8H2,(H,22,26)(H2,21,23,24)/t13-,15-,16-,19-/m1/s1" 
3P1 InChIKey         InChI                1.03  NAHSCHKAPXMNFP-NVQRDWNXSA-N                                                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3P1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R,3R,4S,5R)-2-[6-azanyl-8-(quinolin-2-ylmethylamino)purin-9-yl]-5-(hydroxymethyl)oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3P1 "Create component"     2010-01-25 RCSB 
3P1 "Modify aromatic_flag" 2011-06-04 RCSB 
3P1 "Modify descriptor"    2011-06-04 RCSB 
# 
