data_IS1
#

_chem_comp.id                                   IS1
_chem_comp.name                                 "3-[(1E)-3-oxo-3-({4-[1-(phenylcarbonyl)piperidin-4-yl]butyl}amino)prop-1-en-1-yl]-1-beta-D-ribofuranosylpyridinium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H38 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "3-((E)-3-(4-(1-benzoylpiperidin-4-yl)butylamino)-3-oxoprop-1-enyl)-1-((2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyridinium"
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2009-02-22
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       524.629
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    IS1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3G8E
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IS1  CAM     CAM   C  0  1  Y  N  N  -10.221   3.739  -10.400  -11.421   0.582   0.522  CAM   IS1   1  
IS1  CAI     CAI   C  0  1  Y  N  N  -10.066   3.587   -9.027  -12.422   1.469   0.183  CAI   IS1   2  
IS1  CAH     CAH   C  0  1  Y  N  N  -10.724   2.558   -8.366  -12.917   1.496  -1.109  CAH   IS1   3  
IS1  CAJ     CAJ   C  0  1  Y  N  N  -11.537   1.682   -9.079  -12.414   0.635  -2.068  CAJ   IS1   4  
IS1  CAN     CAN   C  0  1  Y  N  N  -11.693   1.836  -10.452  -11.414  -0.257  -1.742  CAN   IS1   5  
IS1  CBE     CBE   C  0  1  Y  N  N  -11.035   2.865  -11.114  -10.909  -0.289  -0.441  CBE   IS1   6  
IS1  CBC     CBC   C  0  1  N  N  N  -11.196   3.031  -12.627   -9.836  -1.242  -0.084  CBC   IS1   7  
IS1  OAB     OAB   O  0  1  N  N  N  -12.208   3.544  -13.100   -9.954  -2.421  -0.358  OAB   IS1   8  
IS1  NBK     NBK   N  0  1  N  N  N  -10.230   2.612  -13.442   -8.727  -0.804   0.544  NBK   IS1   9  
IS1  CAY     CAY   C  0  1  N  N  N  -10.353   2.830  -14.902   -8.605   0.601   0.955  CAY   IS1  10  
IS1  CAW     CAW   C  0  1  N  N  N   -9.048   3.412  -15.452   -7.302   1.170   0.386  CAW   IS1  11  
IS1  CAX     CAX   C  0  1  N  N  N   -9.026   1.979  -12.859   -7.620  -1.724   0.836  CAX   IS1  12  
IS1  CAV     CAV   C  0  1  N  N  N   -7.766   2.586  -13.477   -6.325  -1.134   0.268  CAV   IS1  13  
IS1  CBF     CBF   C  0  1  N  N  N   -8.128   3.821  -14.299   -6.131   0.285   0.819  CBF   IS1  14  
IS1  CAU     CAU   C  0  1  N  N  N   -6.821   4.422  -14.814   -4.824   0.870   0.280  CAU   IS1  15  
IS1  CAS     CAS   C  0  1  N  N  N   -6.843   5.950  -14.799   -3.643   0.057   0.815  CAS   IS1  16  
IS1  CAR     CAR   C  0  1  N  N  N   -5.397   6.416  -14.960   -2.336   0.642   0.277  CAR   IS1  17  
IS1  CAT     CAT   C  0  1  N  N  N   -5.296   7.842  -15.500   -1.155  -0.171   0.812  CAT   IS1  18  
IS1  NAZ     NAZ   N  0  1  N  N  N   -3.881   8.059  -15.824    0.097   0.389   0.297  NAZ   IS1  19  
IS1  CBB     CBB   C  0  1  N  N  N   -3.029   8.506  -14.906    1.275  -0.169   0.638  CBB   IS1  20  
IS1  OAA     OAA   O  0  1  N  N  N   -3.380   8.792  -13.757    1.300  -1.137   1.374  OAA   IS1  21  
IS1  CAF     CAF   C  0  1  N  N  N   -1.705   8.673  -15.268    2.526   0.391   0.123  CAF   IS1  22  
IS1  CAG     CAG   C  0  1  N  N  N   -0.808   9.199  -14.341    3.705  -0.167   0.464  CAG   IS1  23  
IS1  CBD     CBD   C  0  1  Y  N  N    0.525   9.384  -14.675    4.963   0.396  -0.054  CBD   IS1  24  
IS1  CAP     CAP   C  0  1  Y  N  N    1.394   9.918  -13.727    6.192  -0.173   0.292  CAP   IS1  25  
IS1  CAL     CAL   C  0  1  Y  N  N    1.006   9.036  -15.931    4.949   1.509  -0.908  CAL   IS1  26  
IS1  CAK     CAK   C  0  1  Y  N  N    2.346   9.212  -16.254    6.159   1.998  -1.366  CAK   IS1  27  
IS1  CAO     CAO   C  0  1  Y  N  N    3.220   9.747  -15.312    7.333   1.381  -0.972  CAO   IS1  28  
IS1  NBL     NBL   N  1  1  Y  N  N    2.746  10.090  -14.042    7.317   0.332  -0.172  NBL   IS1  29  
IS1  "C1'"   C1*   C  0  1  N  N  R    3.682  10.612  -13.015    8.587  -0.289   0.212  C1*   IS1  30  
IS1  "O4'"   O4*   O  0  1  N  N  N    4.855   9.797  -12.816    9.594   0.721   0.433  O4*   IS1  31  
IS1  "C4'"   C4*   C  0  1  N  N  R    5.506  10.311  -11.630   10.858   0.033   0.309  C4*   IS1  32  
IS1  "C5'"   C5*   C  0  1  N  N  N    6.434   9.520  -10.818   11.980   1.030   0.012  C5*   IS1  33  
IS1  "O5'"   O5*   O  0  1  N  N  N    6.539  10.162   -9.447   12.170   1.884   1.142  O5*   IS1  34  
IS1  "C3'"   C3*   C  0  1  N  N  S    4.421  11.082  -10.881   10.666  -0.931  -0.882  C3*   IS1  35  
IS1  "O3'"   O3*   O  0  1  N  N  N    4.399  12.406  -10.296   11.337  -2.169  -0.638  O3*   IS1  36  
IS1  "C2'"   C2*   C  0  1  N  N  R    3.155  10.641  -11.561    9.137  -1.148  -0.948  C2*   IS1  37  
IS1  "O2'"   O2*   O  0  1  N  N  N    1.950  11.105  -10.921    8.818  -2.527  -0.745  O2*   IS1  38  
IS1  HAM     HAM   H  0  1  N  N  N   -9.708   4.538  -10.914  -11.032   0.565   1.529  HAM   IS1  39  
IS1  HAI     HAI   H  0  1  N  N  N   -9.435   4.268   -8.475  -12.819   2.143   0.927  HAI   IS1  40  
IS1  HAH     HAH   H  0  1  N  N  N  -10.605   2.438   -7.299  -13.701   2.192  -1.369  HAH   IS1  41  
IS1  HAJ     HAJ   H  0  1  N  N  N  -12.048   0.881   -8.565  -12.806   0.662  -3.074  HAJ   IS1  42  
IS1  HAN     HAN   H  0  1  N  N  N  -12.325   1.156  -11.004  -11.022  -0.929  -2.491  HAN   IS1  43  
IS1  HAY     HAY   H  0  1  N  N  N  -10.562   1.870  -15.398   -9.452   1.169   0.570  HAY   IS1  44  
IS1  HAYA    HAYA  H  0  0  N  N  N  -11.175   3.535  -15.096   -8.586   0.663   2.043  HAYA  IS1  45  
IS1  HAW     HAW   H  0  1  N  N  N   -8.543   2.653  -16.068   -7.359   1.191  -0.702  HAW   IS1  46  
IS1  HAWA    HAWA  H  0  0  N  N  N   -9.277   4.298  -16.062   -7.152   2.182   0.762  HAWA  IS1  47  
IS1  HAX     HAX   H  0  1  N  N  N   -9.016   2.149  -11.772   -7.522  -1.848   1.915  HAX   IS1  48  
IS1  HAXA    HAXA  H  0  0  N  N  N   -9.048   0.899  -13.068   -7.815  -2.691   0.372  HAXA  IS1  49  
IS1  HAV     HAV   H  0  1  N  N  N   -7.071   2.875  -12.675   -5.481  -1.759   0.560  HAV   IS1  50  
IS1  HAVA    HAVA  H  0  0  N  N  N   -7.292   1.842  -14.134   -6.390  -1.096  -0.820  HAVA  IS1  51  
IS1  HBF     HBF   H  0  1  N  N  N   -8.665   4.567  -13.695   -6.090   0.244   1.907  HBF   IS1  52  
IS1  HAU     HAU   H  0  1  N  N  N   -5.999   4.077  -14.170   -4.829   0.829  -0.809  HAU   IS1  53  
IS1  HAUA    HAUA  H  0  0  N  N  N   -6.684   4.095  -15.855   -4.729   1.906   0.605  HAUA  IS1  54  
IS1  HAS     HAS   H  0  1  N  N  N   -7.462   6.332  -15.624   -3.638   0.098   1.905  HAS   IS1  55  
IS1  HASA    HASA  H  0  0  N  N  N   -7.275   6.327  -13.860   -3.739  -0.979   0.491  HASA  IS1  56  
IS1  HAR     HAR   H  0  1  N  N  N   -4.909   6.382  -13.975   -2.341   0.601  -0.812  HAR   IS1  57  
IS1  HARA    HARA  H  0  0  N  N  N   -4.909   5.748  -15.685   -2.241   1.678   0.602  HARA  IS1  58  
IS1  HAT     HAT   H  0  1  N  N  N   -5.920   7.960  -16.398   -1.150  -0.130   1.901  HAT   IS1  59  
IS1  HATA    HATA  H  0  0  N  N  N   -5.653   8.575  -14.761   -1.250  -1.207   0.488  HATA  IS1  60  
IS1  HNAZ    HNAZ  H  0  0  N  N  N   -3.553   7.868  -16.749    0.077   1.161  -0.290  HNAZ  IS1  61  
IS1  HAF     HAF   H  0  1  N  N  N   -1.370   8.399  -16.258    2.505   1.251  -0.531  HAF   IS1  62  
IS1  HAG     HAG   H  0  1  N  N  N   -1.154   9.465  -13.353    3.727  -1.026   1.117  HAG   IS1  63  
IS1  HAP     HAP   H  0  1  N  N  N    1.025  10.199  -12.751    6.220  -1.033   0.944  HAP   IS1  64  
IS1  HAL     HAL   H  0  1  N  N  N    0.330   8.624  -16.665    4.018   1.971  -1.200  HAL   IS1  65  
IS1  HAK     HAK   H  0  1  N  N  N    2.708   8.935  -17.233    6.187   2.853  -2.025  HAK   IS1  66  
IS1  HAO     HAO   H  0  1  N  N  N    4.260   9.897  -15.561    8.278   1.761  -1.329  HAO   IS1  67  
IS1  "H1'"   H1*   H  0  1  N  N  N    3.857  11.610  -13.444    8.456  -0.897   1.108  H1*   IS1  68  
IS1  "H4'"   H4*   H  0  1  N  N  N    6.342  10.930  -11.987   11.077  -0.525   1.219  H4*   IS1  69  
IS1  "H5'"   H5*   H  0  1  N  N  N    6.059   8.490  -10.720   12.903   0.487  -0.192  H5*   IS1  70  
IS1  "H5'A"  H5*A  H  0  0  N  N  N    7.424   9.490  -11.297   11.712   1.630  -0.857  H5*A  IS1  71  
IS1  "HO5'"  HO5*  H  0  0  N  N  N    6.561   9.485   -8.781   12.868   2.543   1.024  HO5*  IS1  72  
IS1  "H3'"   H3*   H  0  1  N  N  N    4.704  10.858   -9.842   11.029  -0.477  -1.804  H3*   IS1  73  
IS1  "HO3'"  HO3*  H  0  0  N  N  N    4.394  12.334   -9.349   12.294  -2.082  -0.528  HO3*  IS1  74  
IS1  "H2'"   H2*   H  0  1  N  N  N    2.603   9.692  -11.492    8.743  -0.800  -1.902  H2*   IS1  75  
IS1  "HO2'"  HO2*  H  0  0  N  N  N    2.105  11.207   -9.989    9.141  -3.112  -1.444  HO2*  IS1  76  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IS1  CAM    CAI     DOUB  Y  N   1  
IS1  CAM    CBE     SING  Y  N   2  
IS1  CAI    CAH     SING  Y  N   3  
IS1  CAH    CAJ     DOUB  Y  N   4  
IS1  CAJ    CAN     SING  Y  N   5  
IS1  CAN    CBE     DOUB  Y  N   6  
IS1  CBE    CBC     SING  N  N   7  
IS1  CBC    OAB     DOUB  N  N   8  
IS1  CBC    NBK     SING  N  N   9  
IS1  NBK    CAY     SING  N  N  10  
IS1  NBK    CAX     SING  N  N  11  
IS1  CAY    CAW     SING  N  N  12  
IS1  CAW    CBF     SING  N  N  13  
IS1  CAX    CAV     SING  N  N  14  
IS1  CAV    CBF     SING  N  N  15  
IS1  CBF    CAU     SING  N  N  16  
IS1  CAU    CAS     SING  N  N  17  
IS1  CAS    CAR     SING  N  N  18  
IS1  CAR    CAT     SING  N  N  19  
IS1  CAT    NAZ     SING  N  N  20  
IS1  NAZ    CBB     SING  N  N  21  
IS1  CBB    OAA     DOUB  N  N  22  
IS1  CBB    CAF     SING  N  N  23  
IS1  CAF    CAG     DOUB  N  N  24  
IS1  CAG    CBD     SING  N  N  25  
IS1  CBD    CAP     DOUB  Y  N  26  
IS1  CBD    CAL     SING  Y  N  27  
IS1  CAP    NBL     SING  Y  N  28  
IS1  CAL    CAK     DOUB  Y  N  29  
IS1  CAK    CAO     SING  Y  N  30  
IS1  CAO    NBL     DOUB  Y  N  31  
IS1  NBL    "C1'"   SING  N  N  32  
IS1  "C1'"  "O4'"   SING  N  N  33  
IS1  "C1'"  "C2'"   SING  N  N  34  
IS1  "O4'"  "C4'"   SING  N  N  35  
IS1  "C4'"  "C5'"   SING  N  N  36  
IS1  "C4'"  "C3'"   SING  N  N  37  
IS1  "C5'"  "O5'"   SING  N  N  38  
IS1  "C3'"  "O3'"   SING  N  N  39  
IS1  "C3'"  "C2'"   SING  N  N  40  
IS1  "C2'"  "O2'"   SING  N  N  41  
IS1  CAM    HAM     SING  N  N  42  
IS1  CAI    HAI     SING  N  N  43  
IS1  CAH    HAH     SING  N  N  44  
IS1  CAJ    HAJ     SING  N  N  45  
IS1  CAN    HAN     SING  N  N  46  
IS1  CAY    HAY     SING  N  E  47  
IS1  CAY    HAYA    SING  N  N  48  
IS1  CAW    HAW     SING  N  N  49  
IS1  CAW    HAWA    SING  N  N  50  
IS1  CAX    HAX     SING  N  N  51  
IS1  CAX    HAXA    SING  N  N  52  
IS1  CAV    HAV     SING  N  N  53  
IS1  CAV    HAVA    SING  N  N  54  
IS1  CBF    HBF     SING  N  N  55  
IS1  CAU    HAU     SING  N  N  56  
IS1  CAU    HAUA    SING  N  N  57  
IS1  CAS    HAS     SING  N  N  58  
IS1  CAS    HASA    SING  N  N  59  
IS1  CAR    HAR     SING  N  N  60  
IS1  CAR    HARA    SING  N  N  61  
IS1  CAT    HAT     SING  N  N  62  
IS1  CAT    HATA    SING  N  N  63  
IS1  NAZ    HNAZ    SING  N  N  64  
IS1  CAF    HAF     SING  N  N  65  
IS1  CAG    HAG     SING  N  N  66  
IS1  CAP    HAP     SING  N  N  67  
IS1  CAL    HAL     SING  N  N  68  
IS1  CAK    HAK     SING  N  N  69  
IS1  CAO    HAO     SING  N  N  70  
IS1  "C1'"  "H1'"   SING  N  N  71  
IS1  "C4'"  "H4'"   SING  N  N  72  
IS1  "C5'"  "H5'"   SING  N  N  73  
IS1  "C5'"  "H5'A"  SING  N  N  74  
IS1  "O5'"  "HO5'"  SING  N  N  75  
IS1  "C3'"  "H3'"   SING  N  N  76  
IS1  "O3'"  "HO3'"  SING  N  N  77  
IS1  "C2'"  "H2'"   SING  N  N  78  
IS1  "O2'"  "HO2'"  SING  N  N  79  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IS1  SMILES            ACDLabs               10.04  "O=C(c1ccccc1)N2CCC(CC2)CCCCNC(=O)\C=C\c3ccc[n+](c3)C4OC(C(O)C4O)CO"  
IS1  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)[n+]2cccc(/C=C/C(=O)NCCCCC3CCN(CC3)C(=O)c4ccccc4)c2"  
IS1  SMILES            CACTVS                3.341  "OC[CH]1O[CH]([CH](O)[CH]1O)[n+]2cccc(C=CC(=O)NCCCCC3CCN(CC3)C(=O)c4ccccc4)c2"  
IS1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1ccc(cc1)C(=O)N2CCC(CC2)CCCCNC(=O)\C=C\c3ccc[n+](c3)[C@H]4[C@@H]([C@@H]([C@H](O4)CO)O)O"  
IS1  SMILES            "OpenEye OEToolkits"  1.5.0  "c1ccc(cc1)C(=O)N2CCC(CC2)CCCCNC(=O)C=Cc3ccc[n+](c3)C4C(C(C(O4)CO)O)O"  
IS1  InChI             InChI                 1.03   "InChI=1S/C29H37N3O6/c33-20-24-26(35)27(36)29(38-24)32-16-6-8-22(19-32)11-12-25(34)30-15-5-4-7-21-13-17-31(18-14-21)28(37)23-9-2-1-3-10-23/h1-3,6,8-12,16,19,21,24,26-27,29,33,35-36H,4-5,7,13-15,17-18,20H2/p+1/b12-11+/t24-,26-,27-,29-/m1/s1"  
IS1  InChIKey          InChI                 1.03   NQSRPUVKZPKDIV-NNOPKNNOSA-O  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
IS1  "SYSTEMATIC NAME"  ACDLabs               10.04  "3-[(1E)-3-oxo-3-({4-[1-(phenylcarbonyl)piperidin-4-yl]butyl}amino)prop-1-en-1-yl]-1-beta-D-ribofuranosylpyridinium"  
IS1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(E)-3-[1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridin-1-ium-3-yl]-N-[4-[1-(phenylcarbonyl)piperidin-4-yl]butyl]prop-2-enamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IS1  "Create component"      2009-02-22  PDBJ  
IS1  "Modify aromatic_flag"  2011-06-04  RCSB  
IS1  "Modify descriptor"     2011-06-04  RCSB  
IS1  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     IS1
_pdbx_chem_comp_synonyms.name        "3-((E)-3-(4-(1-benzoylpiperidin-4-yl)butylamino)-3-oxoprop-1-enyl)-1-((2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyridinium"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
