data_S31
#

_chem_comp.id                                   S31
_chem_comp.name                                 "[N-(3-{bis[2-(pyridin-2-yl-kappaN)ethyl]amino-kappaN}propyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamide](azido)(hydroxy)copper"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H39 Cu N9 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-05-02
_chem_comp.pdbx_modified_date                   2018-04-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       633.268
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S31
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       5VL5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S31  O2   O1   O    0  1  N  N  N  19.910  25.712  -15.046  ?  ?  ?  O2   S31   1  
S31  C10  C1   C    0  1  N  N  N  19.848  24.551  -14.405  ?  ?  ?  C10  S31   2  
S31  C9   C2   C    0  1  N  N  N  18.468  24.224  -13.742  ?  ?  ?  C9   S31   3  
S31  C8   C3   C    0  1  N  N  N  17.744  25.537  -13.325  ?  ?  ?  C8   S31   4  
S31  C7   C4   C    0  1  N  N  N  18.279  25.984  -11.963  ?  ?  ?  C7   S31   5  
S31  C6   C5   C    0  1  N  N  N  17.664  27.242  -11.452  ?  ?  ?  C6   S31   6  
S31  C5   C6   C    0  1  N  N  S  18.115  27.772  -10.095  ?  ?  ?  C5   S31   7  
S31  C4   C7   C    0  1  N  N  S  17.584  29.237   -9.697  ?  ?  ?  C4   S31   8  
S31  N2   N1   N    0  1  N  N  N  16.123  29.236   -9.776  ?  ?  ?  N2   S31   9  
S31  S1   S1   S    0  1  N  N  N  17.995  26.788   -8.648  ?  ?  ?  S1   S31  10  
S31  C3   C8   C    0  1  N  N  N  18.517  28.175   -7.726  ?  ?  ?  C3   S31  11  
S31  C2   C9   C    0  1  N  N  R  17.782  29.461   -8.135  ?  ?  ?  C2   S31  12  
S31  N1   N2   N    0  1  N  N  N  16.420  29.488   -7.569  ?  ?  ?  N1   S31  13  
S31  C1   C10  C    0  1  N  N  N  15.704  29.414   -8.594  ?  ?  ?  C1   S31  14  
S31  O1   O2   O    0  1  N  N  N  14.383  29.404   -8.302  ?  ?  ?  O1   S31  15  
S31  N3   N3   N    0  1  N  N  N  20.895  23.798  -14.207  ?  ?  ?  N3   S31  16  
S31  C11  C11  C    0  1  N  N  N  22.153  24.063  -15.053  ?  ?  ?  C11  S31  17  
S31  C12  C12  C    0  1  N  N  N  23.753  25.371  -15.578  ?  ?  ?  C12  S31  18  
S31  N4   N4   N    0  1  N  N  N  24.817  26.423  -15.448  ?  ?  ?  N4   S31  19  
S31  C27  C13  C    0  1  N  N  N  22.897  25.080  -14.204  ?  ?  ?  C27  S31  20  
S31  C13  C14  C    0  1  N  N  N  23.773  27.589  -15.495  ?  ?  ?  C13  S31  21  
S31  C20  C15  C    0  1  N  N  N  25.508  26.335  -14.288  ?  ?  ?  C20  S31  22  
S31  C21  C16  C    0  1  N  N  N  26.523  27.187  -14.154  ?  ?  ?  C21  S31  23  
S31  C22  C17  C    0  1  Y  N  N  27.631  26.964  -14.884  ?  ?  ?  C22  S31  24  
S31  C26  C18  C    0  1  Y  N  N  28.852  26.957  -14.290  ?  ?  ?  C26  S31  25  
S31  C25  C19  C    0  1  Y  N  N  29.962  26.806  -15.061  ?  ?  ?  C25  S31  26  
S31  C24  C20  C    0  1  Y  N  N  29.900  26.639  -16.409  ?  ?  ?  C24  S31  27  
S31  C23  C21  C    0  1  Y  N  N  28.688  26.651  -17.010  ?  ?  ?  C23  S31  28  
S31  N6   N5   N    0  1  Y  N  N  27.578  26.777  -16.238  ?  ?  ?  N6   S31  29  
S31  CU1  CU1  CU   0  0  N  N  N  25.830  26.854  -17.280  ?  ?  ?  CU1  S31  30  
S31  N8   N6   N    1  1  N  N  N  25.457  29.682  -18.229  ?  ?  ?  N8   S31  31  
S31  N9   N7   N    0  1  N  N  N  25.519  28.596  -17.889  ?  ?  ?  N9   S31  32  
S31  N7   N8   N   -1  1  N  N  N  25.389  30.782  -18.580  ?  ?  ?  N7   S31  33  
S31  N5   N9   N    0  1  Y  N  N  24.047  26.982  -18.392  ?  ?  ?  N5   S31  34  
S31  C15  C22  C    0  1  Y  N  N  22.829  27.378  -17.952  ?  ?  ?  C15  S31  35  
S31  C14  C23  C    0  1  N  N  N  22.548  27.725  -16.494  ?  ?  ?  C14  S31  36  
S31  C16  C24  C    0  1  Y  N  N  24.270  26.684  -19.705  ?  ?  ?  C16  S31  37  
S31  C17  C25  C    0  1  Y  N  N  23.257  26.736  -20.600  ?  ?  ?  C17  S31  38  
S31  C18  C26  C    0  1  Y  N  N  22.028  27.108  -20.161  ?  ?  ?  C18  S31  39  
S31  C19  C27  C    0  1  Y  N  N  21.816  27.438  -18.852  ?  ?  ?  C19  S31  40  
S31  O3   O3   O    0  1  N  N  N  26.219  24.666  -17.841  ?  ?  ?  O3   S31  41  
S31  H1   H1   H    0  1  N  N  N  17.841  23.676  -14.461  ?  ?  ?  H1   S31  42  
S31  H2   H2   H    0  1  N  N  N  18.632  23.601  -12.850  ?  ?  ?  H2   S31  43  
S31  H3   H3   H    0  1  N  N  N  17.938  26.320  -14.073  ?  ?  ?  H3   S31  44  
S31  H4   H4   H    0  1  N  N  N  16.661  25.356  -13.256  ?  ?  ?  H4   S31  45  
S31  H5   H5   H    0  1  N  N  N  18.083  25.183  -11.235  ?  ?  ?  H5   S31  46  
S31  H6   H6   H    0  1  N  N  N  19.364  26.141  -12.052  ?  ?  ?  H6   S31  47  
S31  H7   H7   H    0  1  N  N  N  17.870  28.029  -12.193  ?  ?  ?  H7   S31  48  
S31  H8   H8   H    0  1  N  N  N  16.579  27.072  -11.390  ?  ?  ?  H8   S31  49  
S31  H9   H9   H    0  1  N  N  N  19.201  27.909  -10.201  ?  ?  ?  H9   S31  50  
S31  H10  H10  H    0  1  N  N  N  18.067  30.025  -10.294  ?  ?  ?  H10  S31  51  
S31  H11  H11  H    0  1  N  N  N  15.567  29.118  -10.599  ?  ?  ?  H11  S31  52  
S31  H12  H12  H    0  1  N  N  N  18.326  27.983   -6.660  ?  ?  ?  H12  S31  53  
S31  H13  H13  H    0  1  N  N  N  19.596  28.319   -7.885  ?  ?  ?  H13  S31  54  
S31  H14  H14  H    0  1  N  N  N  18.366  30.369   -7.923  ?  ?  ?  H14  S31  55  
S31  H15  H15  H    0  1  N  N  N  16.140  29.550   -6.611  ?  ?  ?  H15  S31  56  
S31  H16  H16  H    0  1  N  N  N  20.880  23.068  -13.524  ?  ?  ?  H16  S31  57  
S31  H17  H17  H    0  1  N  N  N  22.745  23.145  -15.187  ?  ?  ?  H17  S31  58  
S31  H18  H18  H    0  1  N  N  N  21.892  24.479  -16.037  ?  ?  ?  H18  S31  59  
S31  H19  H19  H    0  1  N  N  N  23.048  25.693  -16.359  ?  ?  ?  H19  S31  60  
S31  H20  H20  H    0  1  N  N  N  24.236  24.432  -15.885  ?  ?  ?  H20  S31  61  
S31  H21  H21  H    0  1  N  N  N  23.477  24.660  -13.369  ?  ?  ?  H21  S31  62  
S31  H22  H22  H    0  1  N  N  N  22.290  25.923  -13.841  ?  ?  ?  H22  S31  63  
S31  H23  H23  H    0  1  N  N  N  24.370  28.500  -15.651  ?  ?  ?  H23  S31  64  
S31  H24  H24  H    0  1  N  N  N  23.325  27.611  -14.490  ?  ?  ?  H24  S31  65  
S31  H25  H25  H    0  1  N  N  N  24.805  26.514  -13.461  ?  ?  ?  H25  S31  66  
S31  H26  H26  H    0  1  N  N  N  25.911  25.314  -14.211  ?  ?  ?  H26  S31  67  
S31  H27  H27  H    0  1  N  N  N  26.821  27.178  -13.095  ?  ?  ?  H27  S31  68  
S31  H28  H28  H    0  1  N  N  N  26.150  28.186  -14.422  ?  ?  ?  H28  S31  69  
S31  H29  H29  H    0  1  N  N  N  28.940  27.070  -13.220  ?  ?  ?  H29  S31  70  
S31  H30  H30  H    0  1  N  N  N  30.931  26.819  -14.584  ?  ?  ?  H30  S31  71  
S31  H31  H31  H    0  1  N  N  N  30.801  26.500  -16.989  ?  ?  ?  H31  S31  72  
S31  H32  H32  H    0  1  N  N  N  28.605  26.562  -18.083  ?  ?  ?  H32  S31  73  
S31  H33  H33  H    0  1  N  N  N  25.422  31.751  -18.410  ?  ?  ?  H33  S31  74  
S31  H34  H34  H    0  1  N  N  N  22.199  28.768  -16.458  ?  ?  ?  H34  S31  75  
S31  H35  H35  H    0  1  N  N  N  21.749  27.058  -16.138  ?  ?  ?  H35  S31  76  
S31  H36  H36  H    0  1  N  N  N  25.261  26.405  -20.031  ?  ?  ?  H36  S31  77  
S31  H37  H37  H    0  1  N  N  N  23.422  26.488  -21.638  ?  ?  ?  H37  S31  78  
S31  H38  H38  H    0  1  N  N  N  21.204  27.144  -20.858  ?  ?  ?  H38  S31  79  
S31  H39  H39  H    0  1  N  N  N  20.833  27.749  -18.531  ?  ?  ?  H39  S31  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S31  C17  C18  DOUB  Y  N   1  
S31  C17  C16  SING  Y  N   2  
S31  C18  C19  SING  Y  N   3  
S31  C16  N5   DOUB  Y  N   4  
S31  C19  C15  DOUB  Y  N   5  
S31  N7   N8   DOUB  N  N   6  
S31  N5   C15  SING  Y  N   7  
S31  N5   CU1  SING  N  N   8  
S31  N8   N9   DOUB  N  N   9  
S31  C15  C14  SING  N  N  10  
S31  N9   CU1  SING  N  N  11  
S31  O3   CU1  SING  N  N  12  
S31  CU1  N6   SING  N  N  13  
S31  CU1  N4   SING  N  N  14  
S31  C23  C24  DOUB  Y  N  15  
S31  C23  N6   SING  Y  N  16  
S31  C14  C13  SING  N  N  17  
S31  C24  C25  SING  Y  N  18  
S31  N6   C22  DOUB  Y  N  19  
S31  C12  N4   SING  N  N  20  
S31  C12  C27  SING  N  N  21  
S31  C13  N4   SING  N  N  22  
S31  N4   C20  SING  N  N  23  
S31  C25  C26  DOUB  Y  N  24  
S31  C11  N3   SING  N  N  25  
S31  C11  C27  SING  N  N  26  
S31  O2   C10  DOUB  N  N  27  
S31  C22  C26  SING  Y  N  28  
S31  C22  C21  SING  N  N  29  
S31  C10  N3   SING  N  N  30  
S31  C10  C9   SING  N  N  31  
S31  C20  C21  SING  N  N  32  
S31  C9   C8   SING  N  N  33  
S31  C8   C7   SING  N  N  34  
S31  C7   C6   SING  N  N  35  
S31  C6   C5   SING  N  N  36  
S31  C5   C4   SING  N  N  37  
S31  C5   S1   SING  N  N  38  
S31  N2   C4   SING  N  N  39  
S31  N2   C1   SING  N  N  40  
S31  C4   C2   SING  N  N  41  
S31  S1   C3   SING  N  N  42  
S31  C1   O1   DOUB  N  N  43  
S31  C1   N1   SING  N  N  44  
S31  C2   C3   SING  N  N  45  
S31  C2   N1   SING  N  N  46  
S31  C9   H1   SING  N  N  47  
S31  C9   H2   SING  N  N  48  
S31  C8   H3   SING  N  N  49  
S31  C8   H4   SING  N  N  50  
S31  C7   H5   SING  N  N  51  
S31  C7   H6   SING  N  N  52  
S31  C6   H7   SING  N  N  53  
S31  C6   H8   SING  N  N  54  
S31  C5   H9   SING  N  N  55  
S31  C4   H10  SING  N  N  56  
S31  N2   H11  SING  N  N  57  
S31  C3   H12  SING  N  N  58  
S31  C3   H13  SING  N  N  59  
S31  C2   H14  SING  N  N  60  
S31  N1   H15  SING  N  N  61  
S31  N3   H16  SING  N  N  62  
S31  C11  H17  SING  N  N  63  
S31  C11  H18  SING  N  N  64  
S31  C12  H19  SING  N  N  65  
S31  C12  H20  SING  N  N  66  
S31  C27  H21  SING  N  N  67  
S31  C27  H22  SING  N  N  68  
S31  C13  H23  SING  N  N  69  
S31  C13  H24  SING  N  N  70  
S31  C20  H25  SING  N  N  71  
S31  C20  H26  SING  N  N  72  
S31  C21  H27  SING  N  N  73  
S31  C21  H28  SING  N  N  74  
S31  C26  H29  SING  N  N  75  
S31  C25  H30  SING  N  N  76  
S31  C24  H31  SING  N  N  77  
S31  C23  H32  SING  N  N  78  
S31  N7   H33  SING  N  N  79  
S31  C14  H34  SING  N  N  80  
S31  C14  H35  SING  N  N  81  
S31  C16  H36  SING  N  N  82  
S31  C17  H37  SING  N  N  83  
S31  C18  H38  SING  N  N  84  
S31  C19  H39  SING  N  N  85  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S31  InChI             InChI                 1.03   "InChI=1S/C27H38N6O2S.Cu.HN3.H2O/c34-25(11-2-1-10-24-26-23(20-36-24)31-27(35)32-26)30-16-7-17-33(18-12-21-8-3-5-14-28-21)19-13-22-9-4-6-15-29-22;;1-3-2;/h3-6,8-9,14-15,23-24,26H,1-2,7,10-13,16-20H2,(H,30,34)(H2,31,32,35);;1H;1H2/q;+2;-1;/p-1/t23-,24-,26-;;;/m0.../s1"  
S31  InChIKey          InChI                 1.03   PEDLMSAQKQLGPS-RGZPRUOZSA-M  
S31  SMILES_CANONICAL  CACTVS                3.385  "O.[Cu]N=[N+]=[NH-].O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)NCCCN(CCc3ccccn3)CCc4ccccn4"  
S31  SMILES            CACTVS                3.385  "O.[Cu]N=[N+]=[NH-].O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)NCCCN(CCc3ccccn3)CCc4ccccn4"  
S31  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2([N]4=C1C=CC=C4)(N=[N+]=[NH-])[O])CCCNC(=O)CCCC[C@H]5[C@@H]6[C@H](CS5)NC(=O)N6"  
S31  SMILES            "OpenEye OEToolkits"  2.0.6  "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2([N]4=C1C=CC=C4)(N=[N+]=[NH-])[O])CCCNC(=O)CCCCC5C6C(CS5)NC(=O)N6"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S31  "Create component"  2017-05-02  RCSB  
S31  "Modify name"       2017-05-03  RCSB  
S31  "Initial release"   2018-04-18  RCSB  
##
