data_9F2
# 
_chem_comp.id                                    9F2 
_chem_comp.name                                  Ceftriaxone 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H18 N8 O7 S3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-15 
_chem_comp.pdbx_modified_date                    2017-06-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        554.580 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9F2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5NZW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9F2 C1  C1  C 0 1 N N R 7.470  19.962 20.729 -0.593  -1.517 -1.355 C1  9F2 1  
9F2 S1  S1  S 0 1 N N N 8.603  19.951 22.022 -0.308  0.147  -2.046 S1  9F2 2  
9F2 C2  C2  C 0 1 N N N 7.459  19.663 23.383 1.500   0.274  -1.886 C2  9F2 3  
9F2 C3  C3  C 0 1 N N N 6.205  18.883 23.039 1.987   -0.233 -0.568 C3  9F2 4  
9F2 C4  C4  C 0 1 N N N 5.879  17.931 24.167 3.341   0.262  -0.131 C4  9F2 5  
9F2 S2  S2  S 0 1 N N N 5.304  18.817 25.666 4.630   -0.620 -1.045 S2  9F2 6  
9F2 C5  C5  C 0 1 N N N 6.332  18.230 26.958 6.025   0.114  -0.375 C5  9F2 7  
9F2 N1  N1  N 0 1 N N N 6.621  16.964 27.056 5.875   1.050  0.550  N1  9F2 8  
9F2 C6  C6  C 0 1 N N N 7.413  16.504 28.087 6.932   1.649  1.100  C6  9F2 9  
9F2 O1  O1  O 0 1 N N N 7.635  15.280 28.107 6.781   2.507  1.949  O1  9F2 10 
9F2 C7  C7  C 0 1 N N N 7.916  17.354 29.051 8.306   1.250  0.659  C7  9F2 11 
9F2 O2  O2  O 0 1 N N N 8.619  16.958 29.967 9.292   1.773  1.137  O2  9F2 12 
9F2 N2  N2  N 0 1 N N N 7.605  18.693 28.955 8.418   0.290  -0.288 N2  9F2 13 
9F2 N3  N3  N 0 1 N N N 6.788  19.143 27.879 7.250   -0.287 -0.806 N3  9F2 14 
9F2 C8  C8  C 0 1 N N N 6.488  20.580 27.821 7.351   -1.331 -1.828 C8  9F2 15 
9F2 C9  C9  C 0 1 N N N 5.484  19.076 21.914 1.376   -1.064 0.266  C9  9F2 16 
9F2 N4  N4  N 0 1 N N N 6.123  19.689 20.817 0.091   -1.536 -0.034 N4  9F2 17 
9F2 C10 C10 C 0 1 N N N 5.870  20.233 19.542 -1.027  -1.961 0.543  C10 9F2 18 
9F2 O3  O3  O 0 1 N N N 4.849  20.548 18.968 -1.253  -2.399 1.651  O3  9F2 19 
9F2 C11 C11 C 0 1 N N R 7.387  20.285 19.234 -1.922  -1.713 -0.648 C11 9F2 20 
9F2 N5  N5  N 0 1 N N N 8.095  21.489 18.843 -2.738  -0.501 -0.549 N5  9F2 21 
9F2 C12 C12 C 0 1 N N N 7.822  22.726 19.301 -4.054  -0.595 -0.271 C12 9F2 22 
9F2 O4  O4  O 0 1 N N N 6.799  23.005 19.925 -4.562  -1.685 -0.102 O4  9F2 23 
9F2 C13 C13 C 0 1 N N N 8.805  23.836 19.038 -4.879  0.632  -0.171 C13 9F2 24 
9F2 N6  N6  N 0 1 N N N 10.068 23.724 19.254 -4.333  1.801  -0.352 N6  9F2 25 
9F2 O5  O5  O 0 1 N N N 10.605 24.873 19.869 -5.144  2.962  -0.395 O5  9F2 26 
9F2 C14 C14 C 0 1 N N N 11.569 25.493 19.007 -4.414  4.173  -0.599 C14 9F2 27 
9F2 C15 C15 C 0 1 Y N N 8.269  25.001 18.310 -6.322  0.529  0.135  C15 9F2 28 
9F2 C16 C16 C 0 1 Y N N 8.417  26.290 18.682 -7.070  1.601  0.462  C16 9F2 29 
9F2 S3  S3  S 0 1 Y N N 7.847  27.335 17.435 -8.721  1.058  0.747  S3  9F2 30 
9F2 C17 C17 C 0 1 Y N N 7.434  25.925 16.495 -8.242  -0.599 0.390  C17 9F2 31 
9F2 N7  N7  N 0 1 N N N 7.052  26.033 15.205 -9.086  -1.696 0.408  N7  9F2 32 
9F2 N8  N8  N 0 1 Y N N 7.539  24.798 17.151 -6.979  -0.631 0.100  N8  9F2 33 
9F2 C18 C18 C 0 1 N N N 4.023  18.703 21.684 2.049   -1.491 1.506  C18 9F2 34 
9F2 O6  O6  O 0 1 N N N 3.669  18.413 20.522 2.464   -2.628 1.611  O6  9F2 35 
9F2 O7  O7  O 0 1 N N N 3.256  18.722 22.669 2.203   -0.621 2.523  O7  9F2 36 
9F2 H1  H1  H 0 1 N N N 7.689  18.907 20.507 -0.306  -2.325 -2.028 H1  9F2 37 
9F2 H2  H2  H 0 1 N N N 7.998  19.107 24.165 1.967   -0.306 -2.682 H2  9F2 38 
9F2 H3  H3  H 0 1 N N N 7.150  20.643 23.776 1.792   1.318  -1.991 H3  9F2 39 
9F2 H5  H5  H 0 1 N N N 5.087  17.244 23.835 3.420   1.331  -0.332 H5  9F2 40 
9F2 H6  H6  H 0 1 N N N 6.782  17.355 24.419 3.466   0.084  0.937  H6  9F2 41 
9F2 H7  H7  H 0 1 N N N 7.949  19.342 29.634 9.290   0.005  -0.601 H7  9F2 42 
9F2 H8  H8  H 0 1 N N N 6.968  21.090 28.669 7.353   -0.873 -2.817 H8  9F2 43 
9F2 H9  H9  H 0 1 N N N 6.872  20.997 26.878 8.276   -1.890 -1.686 H9  9F2 44 
9F2 H10 H10 H 0 1 N N N 5.399  20.730 27.872 6.501   -2.007 -1.742 H10 9F2 45 
9F2 H12 H12 H 0 1 N N N 7.688  19.416 18.630 -2.483  -2.587 -0.979 H12 9F2 46 
9F2 H13 H13 H 0 1 N N N 8.841  21.394 18.184 -2.332  0.370  -0.684 H13 9F2 47 
9F2 H14 H14 H 0 1 N N N 11.980 26.387 19.499 -5.106  5.015  -0.621 H14 9F2 48 
9F2 H15 H15 H 0 1 N N N 12.383 24.784 18.797 -3.701  4.309  0.214  H15 9F2 49 
9F2 H16 H16 H 0 1 N N N 11.084 25.784 18.064 -3.878  4.119  -1.547 H16 9F2 50 
9F2 H18 H18 H 0 1 N N N 8.832  26.619 19.623 -6.716  2.619  0.538  H18 9F2 51 
9F2 H21 H21 H 0 1 N N N 6.864  25.123 14.835 -8.742  -2.576 0.191  H21 9F2 52 
9F2 H22 H22 H 0 1 N N N 6.225  26.593 15.148 -10.022 -1.584 0.637  H22 9F2 53 
9F2 H26 H26 H 0 1 N N N 2.379  18.484 22.392 2.650   -0.947 3.316  H26 9F2 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9F2 N7  C17 SING N N 1  
9F2 C17 N8  DOUB Y N 2  
9F2 C17 S3  SING Y N 3  
9F2 N8  C15 SING Y N 4  
9F2 S3  C16 SING Y N 5  
9F2 C15 C16 DOUB Y N 6  
9F2 C15 C13 SING N N 7  
9F2 N5  C11 SING N N 8  
9F2 N5  C12 SING N N 9  
9F2 O3  C10 DOUB N N 10 
9F2 C14 O5  SING N N 11 
9F2 C13 N6  DOUB N E 12 
9F2 C13 C12 SING N N 13 
9F2 C11 C10 SING N N 14 
9F2 C11 C1  SING N N 15 
9F2 N6  O5  SING N N 16 
9F2 C12 O4  DOUB N N 17 
9F2 C10 N4  SING N N 18 
9F2 O6  C18 DOUB N N 19 
9F2 C1  N4  SING N N 20 
9F2 C1  S1  SING N N 21 
9F2 N4  C9  SING N N 22 
9F2 C18 C9  SING N N 23 
9F2 C18 O7  SING N N 24 
9F2 C9  C3  DOUB N N 25 
9F2 S1  C2  SING N N 26 
9F2 C3  C2  SING N N 27 
9F2 C3  C4  SING N N 28 
9F2 C4  S2  SING N N 29 
9F2 S2  C5  SING N N 30 
9F2 C5  N1  DOUB N N 31 
9F2 C5  N3  SING N N 32 
9F2 N1  C6  SING N N 33 
9F2 C8  N3  SING N N 34 
9F2 N3  N2  SING N N 35 
9F2 C6  O1  DOUB N N 36 
9F2 C6  C7  SING N N 37 
9F2 N2  C7  SING N N 38 
9F2 C7  O2  DOUB N N 39 
9F2 C1  H1  SING N N 40 
9F2 C2  H2  SING N N 41 
9F2 C2  H3  SING N N 42 
9F2 C4  H5  SING N N 43 
9F2 C4  H6  SING N N 44 
9F2 N2  H7  SING N N 45 
9F2 C8  H8  SING N N 46 
9F2 C8  H9  SING N N 47 
9F2 C8  H10 SING N N 48 
9F2 C11 H12 SING N N 49 
9F2 N5  H13 SING N N 50 
9F2 C14 H14 SING N N 51 
9F2 C14 H15 SING N N 52 
9F2 C14 H16 SING N N 53 
9F2 C16 H18 SING N N 54 
9F2 N7  H21 SING N N 55 
9F2 N7  H22 SING N N 56 
9F2 O7  H26 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9F2 InChI            InChI                1.03  
"InChI=1S/C18H18N8O7S3/c1-25-18(22-12(28)13(29)23-25)36-4-6-3-34-15-9(14(30)26(15)10(6)16(31)32)21-11(27)8(24-33-2)7-5-35-17(19)20-7/h5,9,15H,3-4H2,1-2H3,(H2,19,20)(H,21,27)(H,23,29)(H,31,32)/b24-8+/t9-,15-/m1/s1" 
9F2 InChIKey         InChI                1.03  VAAUVRVFOQPIGI-TYHRLYECSA-N 
9F2 SMILES_CANONICAL CACTVS               3.385 "CO/N=C(/C(=O)N[C@H]1[C@H]2SCC(=C(N2C1=O)C(O)=O)CSC3=NC(=O)C(=O)NN3C)c4csc(N)n4" 
9F2 SMILES           CACTVS               3.385 "CON=C(C(=O)N[CH]1[CH]2SCC(=C(N2C1=O)C(O)=O)CSC3=NC(=O)C(=O)NN3C)c4csc(N)n4" 
9F2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN1C(=NC(=O)C(=O)N1)SCC2=C(N3C([C@@H](C3=O)NC(=O)C(=NOC)c4csc(n4)N)SC2)C(=O)O" 
9F2 SMILES           "OpenEye OEToolkits" 2.0.6 "CN1C(=NC(=O)C(=O)N1)SCC2=C(N3C(C(C3=O)NC(=O)C(=NOC)c4csc(n4)N)SC2)C(=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9F2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(7~{R})-7-[[2-(2-azanyl-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-3-[[2-methyl-5,6-bis(oxidanylidene)-1~{H}-1,2,4-triazin-3-yl]sulfanylmethyl]-8-oxidanylidene-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9F2 "Create component"   2017-05-15 RCSB 
9F2 "Modify formula"     2017-05-16 EBI  
9F2 "Other modification" 2017-06-03 EBI  
9F2 "Initial release"    2017-06-14 RCSB 
# 
