data_GN2
# 
_chem_comp.id                                    GN2 
_chem_comp.name                                  "(2~{S})-5-(2-chlorophenyl)sulfanyl-2-(4-morpholin-4-ylphenyl)-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H23 Cl N2 O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-07-28 
_chem_comp.pdbx_modified_date                    2016-09-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        499.045 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GN2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5IXY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GN2 C4  C1  C  0 1 Y N N 43.368 14.062 24.029 -1.058 -0.962 1.034  C4  GN2 1  
GN2 C5  C2  C  0 1 Y N N 42.048 13.710 24.258 -1.591 -0.397 -0.110 C5  GN2 2  
GN2 C6  C3  C  0 1 Y N N 41.425 12.906 23.317 -1.475 -1.047 -1.325 C6  GN2 3  
GN2 C8  C4  C  0 1 N N S 41.274 14.181 25.469 -2.300 0.931  -0.032 C8  GN2 4  
GN2 C9  C5  C  0 1 Y N N 42.216 14.778 26.460 -3.766 0.699  0.228  C9  GN2 5  
GN2 C10 C6  C  0 1 Y N N 42.563 16.115 26.503 -4.654 0.551  -0.757 C10 GN2 6  
GN2 C12 C7  C  0 1 Y N N 43.670 14.880 28.307 -5.609 0.408  1.558  C12 GN2 7  
GN2 C13 C8  C  0 1 Y N N 42.869 14.088 27.519 -4.293 0.617  1.505  C13 GN2 8  
GN2 C3  C9  C  0 1 Y N N 44.041 13.621 22.908 -0.402 -2.176 0.965  C3  GN2 9  
GN2 C1  C10 C  0 1 Y N N 42.100 12.456 22.202 -0.826 -2.264 -1.400 C1  GN2 10 
GN2 C2  C11 C  0 1 Y N N 43.421 12.806 21.978 -0.279 -2.829 -0.255 C2  GN2 11 
GN2 N7  N1  N  0 1 N N N 44.113 12.348 20.832 0.379  -4.059 -0.327 N7  GN2 12 
GN2 S11 S1  S  0 1 Y N N 43.650 16.508 27.770 -6.255 0.299  -0.074 S11 GN2 13 
GN2 N14 N2  N  0 1 N N N 40.357 15.228 25.099 -1.736 1.717  1.066  N14 GN2 14 
GN2 C15 C12 C  0 1 N N N 39.241 15.553 25.841 -0.596 2.412  0.893  C15 GN2 15 
GN2 C16 C13 C  0 1 N N N 38.981 14.703 27.029 0.011  2.496  -0.439 C16 GN2 16 
GN2 C17 C14 C  0 1 N N N 39.538 13.493 27.110 -0.705 2.126  -1.518 C17 GN2 17 
GN2 C18 C15 C  0 1 N N N 40.468 13.029 26.048 -2.132 1.672  -1.356 C18 GN2 18 
GN2 O19 O1  O  0 1 N N N 39.449 12.618 27.997 -0.142 2.162  -2.747 O19 GN2 19 
GN2 O20 O2  O  0 1 N N N 38.472 16.452 25.545 -0.072 2.970  1.839  O20 GN2 20 
GN2 S21 S2  S  0 1 N N N 37.879 15.273 28.217 1.664  3.077  -0.626 S21 GN2 21 
GN2 C22 C16 C  0 1 Y N N 38.885 16.153 29.379 2.616  1.827  0.172  C22 GN2 22 
GN2 C23 C17 C  0 1 Y N N 40.168 16.555 29.062 1.999  0.671  0.635  C23 GN2 23 
GN2 C24 C18 C  0 1 Y N N 40.933 17.240 29.984 2.749  -0.306 1.260  C24 GN2 24 
GN2 C25 C19 C  0 1 Y N N 40.421 17.532 31.230 4.111  -0.137 1.424  C25 GN2 25 
GN2 C26 C20 C  0 1 Y N N 39.139 17.139 31.555 4.729  1.013  0.965  C26 GN2 26 
GN2 C27 C21 C  0 1 Y N N 38.373 16.453 30.632 3.987  1.993  0.335  C27 GN2 27 
GN2 CL  CL1 CL 0 0 N N N 36.775 15.966 31.090 4.765  3.431  -0.248 CL  GN2 28 
GN2 C29 C22 C  0 1 N N N 43.440 12.334 19.536 1.474  -4.014 -1.306 C29 GN2 29 
GN2 C30 C23 C  0 1 N N N 43.781 11.044 18.816 2.128  -5.396 -1.396 C30 GN2 30 
GN2 O31 O3  O  0 1 N N N 45.205 10.934 18.750 2.578  -5.790 -0.098 O31 GN2 31 
GN2 C32 C24 C  0 1 N N N 45.743 10.694 20.051 1.537  -5.845 0.881  C32 GN2 32 
GN2 C33 C25 C  0 1 N N N 45.504 11.902 20.936 0.877  -4.468 0.994  C33 GN2 33 
GN2 H1  H1  H  0 1 N N N 43.880 14.693 24.741 -1.150 -0.452 1.982  H1  GN2 34 
GN2 H2  H2  H  0 1 N N N 40.392 12.627 23.460 -1.894 -0.603 -2.216 H2  GN2 35 
GN2 H3  H3  H  0 1 N N N 42.184 16.845 25.803 -4.425 0.582  -1.812 H3  GN2 36 
GN2 H4  H4  H  0 1 N N N 44.238 14.523 29.154 -6.188 0.316  2.465  H4  GN2 37 
GN2 H5  H5  H  0 1 N N N 42.746 13.029 27.690 -3.683 0.714  2.392  H5  GN2 38 
GN2 H6  H6  H  0 1 N N N 45.068 13.917 22.754 0.014  -2.617 1.859  H6  GN2 39 
GN2 H7  H7  H  0 1 N N N 41.591 11.821 21.492 -0.737 -2.771 -2.349 H7  GN2 40 
GN2 H8  H8  H  0 1 N N N 40.539 15.745 24.262 -2.187 1.738  1.924  H8  GN2 41 
GN2 H10 H10 H  0 1 N N N 39.884 12.561 25.242 -2.395 1.007  -2.179 H10 GN2 42 
GN2 H11 H11 H  0 1 N N N 41.160 12.289 26.477 -2.791 2.540  -1.371 H11 GN2 43 
GN2 H12 H12 H  0 1 N N N 40.575 16.332 28.087 0.935  0.538  0.507  H12 GN2 44 
GN2 H13 H13 H  0 1 N N N 41.936 17.548 29.728 2.270  -1.205 1.620  H13 GN2 45 
GN2 H14 H14 H  0 1 N N N 41.022 18.067 31.950 4.694  -0.903 1.914  H14 GN2 46 
GN2 H15 H15 H  0 1 N N N 38.735 17.367 32.530 5.793  1.142  1.096  H15 GN2 47 
GN2 H16 H16 H  0 1 N N N 43.778 13.192 18.936 1.078  -3.734 -2.282 H16 GN2 48 
GN2 H17 H17 H  0 1 N N N 42.352 12.397 19.685 2.215  -3.280 -0.990 H17 GN2 49 
GN2 H18 H18 H  0 1 N N N 43.361 11.062 17.799 1.400  -6.119 -1.765 H18 GN2 50 
GN2 H19 H19 H  0 1 N N N 43.366 10.188 19.369 2.976  -5.353 -2.079 H19 GN2 51 
GN2 H20 H20 H  0 1 N N N 45.252 9.815  20.493 0.792  -6.582 0.579  H20 GN2 52 
GN2 H21 H21 H  0 1 N N N 46.824 10.508 19.971 1.958  -6.127 1.846  H21 GN2 53 
GN2 H22 H22 H  0 1 N N N 45.721 11.634 21.981 1.609  -3.742 1.348  H22 GN2 54 
GN2 H23 H23 H  0 1 N N N 46.170 12.719 20.621 0.046  -4.519 1.697  H23 GN2 55 
GN2 H9  H9  H  0 1 N N N 38.854 12.914 28.676 0.798  2.391  -2.743 H9  GN2 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GN2 O31 C30 SING N N 1  
GN2 O31 C32 SING N N 2  
GN2 C30 C29 SING N N 3  
GN2 C29 N7  SING N N 4  
GN2 C32 C33 SING N N 5  
GN2 N7  C33 SING N N 6  
GN2 N7  C2  SING N N 7  
GN2 C2  C1  DOUB Y N 8  
GN2 C2  C3  SING Y N 9  
GN2 C1  C6  SING Y N 10 
GN2 C3  C4  DOUB Y N 11 
GN2 C6  C5  DOUB Y N 12 
GN2 C4  C5  SING Y N 13 
GN2 C5  C8  SING N N 14 
GN2 N14 C8  SING N N 15 
GN2 N14 C15 SING N N 16 
GN2 C8  C18 SING N N 17 
GN2 C8  C9  SING N N 18 
GN2 O20 C15 DOUB N N 19 
GN2 C15 C16 SING N N 20 
GN2 C18 C17 SING N N 21 
GN2 C9  C10 DOUB Y N 22 
GN2 C9  C13 SING Y N 23 
GN2 C10 S11 SING Y N 24 
GN2 C16 C17 DOUB N N 25 
GN2 C16 S21 SING N N 26 
GN2 C17 O19 SING N N 27 
GN2 C13 C12 DOUB Y N 28 
GN2 S11 C12 SING Y N 29 
GN2 S21 C22 SING N N 30 
GN2 C23 C22 DOUB Y N 31 
GN2 C23 C24 SING Y N 32 
GN2 C22 C27 SING Y N 33 
GN2 C24 C25 DOUB Y N 34 
GN2 C27 CL  SING N N 35 
GN2 C27 C26 DOUB Y N 36 
GN2 C25 C26 SING Y N 37 
GN2 C4  H1  SING N N 38 
GN2 C6  H2  SING N N 39 
GN2 C10 H3  SING N N 40 
GN2 C12 H4  SING N N 41 
GN2 C13 H5  SING N N 42 
GN2 C3  H6  SING N N 43 
GN2 C1  H7  SING N N 44 
GN2 N14 H8  SING N N 45 
GN2 C18 H10 SING N N 46 
GN2 C18 H11 SING N N 47 
GN2 C23 H12 SING N N 48 
GN2 C24 H13 SING N N 49 
GN2 C25 H14 SING N N 50 
GN2 C26 H15 SING N N 51 
GN2 C29 H16 SING N N 52 
GN2 C29 H17 SING N N 53 
GN2 C30 H18 SING N N 54 
GN2 C30 H19 SING N N 55 
GN2 C32 H20 SING N N 56 
GN2 C32 H21 SING N N 57 
GN2 C33 H22 SING N N 58 
GN2 C33 H23 SING N N 59 
GN2 O19 H9  SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GN2 InChI            InChI                1.03  "InChI=1S/C25H23ClN2O3S2/c26-20-3-1-2-4-22(20)33-23-21(29)15-25(27-24(23)30,18-9-14-32-16-18)17-5-7-19(8-6-17)28-10-12-31-13-11-28/h1-9,14,16,29H,10-13,15H2,(H,27,30)/t25-/m0/s1" 
GN2 InChIKey         InChI                1.03  SUFXXEIVBZJOAP-VWLOTQADSA-N                                                                                                                                                        
GN2 SMILES_CANONICAL CACTVS               3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C@](C1)(c3cscc3)c4ccc(cc4)N5CCOCC5"                                                                                                                      
GN2 SMILES           CACTVS               3.385 "OC1=C(Sc2ccccc2Cl)C(=O)N[C](C1)(c3cscc3)c4ccc(cc4)N5CCOCC5"                                                                                                                       
GN2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "c1ccc(c(c1)SC2=C(C[C@](NC2=O)(c3ccc(cc3)N4CCOCC4)c5ccsc5)O)Cl"                                                                                                                    
GN2 SMILES           "OpenEye OEToolkits" 2.0.5 "c1ccc(c(c1)SC2=C(CC(NC2=O)(c3ccc(cc3)N4CCOCC4)c5ccsc5)O)Cl"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GN2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "(2~{S})-5-(2-chlorophenyl)sulfanyl-2-(4-morpholin-4-ylphenyl)-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GN2 "Create component" 2016-07-28 RCSB 
GN2 "Initial release"  2016-09-14 RCSB 
# 
