data_U52
# 
_chem_comp.id                                    U52 
_chem_comp.name                                  "2-[6-[[5-chloranyl-2-[(3~{S},5~{R})-3,5-dimethylpiperidin-1-yl]pyrimidin-4-yl]amino]-1-methyl-2-oxidanylidene-quinolin-3-yl]oxy-~{N}-methyl-ethanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H29 Cl N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-01-18 
_chem_comp.pdbx_modified_date                    2017-09-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        484.978 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     U52 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5MW2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
U52 C4  C1  C  0 1 N N N 7.607  13.418 13.702 -5.024 -1.924 -1.313 C4  U52 1  
U52 C5  C2  C  0 1 N N N 8.655  14.478 13.948 -3.851 -1.010 -1.068 C5  U52 2  
U52 C8  C3  C  0 1 N N N 12.169 17.195 9.715  -3.194 4.383  1.792  C8  U52 3  
U52 C10 C4  C  0 1 N N N 10.687 15.980 11.225 -3.711 2.266  0.724  C10 U52 4  
U52 C13 C5  C  0 1 Y N N 13.538 19.508 13.009 0.782  3.871  0.606  C13 U52 5  
U52 C15 C6  C  0 1 Y N N 12.126 17.760 12.142 -1.469 3.043  0.665  C15 U52 6  
U52 C17 C7  C  0 1 Y N N 12.076 18.306 14.500 0.274  1.765  -0.444 C17 U52 7  
U52 C22 C8  C  0 1 Y N N 14.776 20.010 15.941 3.113  1.345  -0.541 C22 U52 8  
U52 C24 C9  C  0 1 Y N N 17.000 19.422 15.868 2.996  -0.931 -0.194 C24 U52 9  
U52 C26 C10 C  0 1 Y N N 16.255 20.463 17.749 4.949  -0.084 -1.080 C26 U52 10 
U52 C28 C11 C  0 1 N N N 17.836 18.305 13.824 3.047  -3.266 0.081  C28 U52 11 
U52 C1  C12 C  0 1 N N N 6.405  11.496 14.610 -5.990 -3.963 -2.232 C1  U52 12 
U52 N2  N1  N  0 1 N N N 7.369  12.577 14.702 -4.850 -3.075 -1.993 N2  U52 13 
U52 O3  O1  O  0 1 N N N 7.015  13.366 12.626 -6.122 -1.626 -0.895 O3  U52 14 
U52 O6  O2  O  0 1 N N N 9.221  14.795 12.657 -4.286 0.136  -0.333 O6  U52 15 
U52 O7  O3  O  0 1 N N N 10.285 15.325 10.268 -4.868 2.425  1.073  O7  U52 16 
U52 N9  N2  N  0 1 N N N 11.641 16.975 11.063 -2.790 3.193  1.039  N9  U52 17 
U52 C11 C13 C  0 1 N N N 10.159 15.785 12.596 -3.344 1.067  -0.026 C11 U52 18 
U52 C12 C14 C  0 1 N N N 10.608 16.517 13.619 -2.054 0.889  -0.416 C12 U52 19 
U52 C14 C15 C  0 1 Y N N 13.108 18.731 11.946 -0.530 4.017  0.996  C14 U52 20 
U52 C16 C16 C  0 1 Y N N 11.606 17.535 13.431 -1.066 1.912  -0.068 C16 U52 21 
U52 C18 C17 C  0 1 Y N N 13.032 19.295 14.289 1.193  2.735  -0.091 C18 U52 22 
U52 N19 N3  N  0 1 N N N 13.529 20.028 15.385 2.531  2.602  -0.480 N19 U52 23 
U52 N20 N4  N  0 1 N N N 18.028 18.854 15.170 2.270  -2.030 0.235  N20 U52 24 
U52 CL1 CL1 CL 0 0 N N N 13.698 21.257 18.135 5.321  2.557  -1.591 CL1 U52 25 
U52 N23 N5  N  0 1 Y N N 15.786 19.427 15.272 2.444  0.271  -0.132 N23 U52 26 
U52 N25 N6  N  0 1 Y N N 17.286 19.913 17.092 4.223  -1.111 -0.661 N25 U52 27 
U52 C27 C18 C  0 1 Y N N 14.979 20.526 17.221 4.409  1.187  -1.038 C27 U52 28 
U52 C29 C19 C  0 1 N N S 18.546 16.976 13.547 2.166  -4.470 0.426  C29 U52 29 
U52 C30 C20 C  0 1 N N N 20.017 17.084 13.963 1.666  -4.334 1.867  C30 U52 30 
U52 C31 C21 C  0 1 N N R 20.138 17.450 15.445 0.902  -3.015 2.011  C31 U52 31 
U52 C32 C22 C  0 1 N N N 19.387 18.758 15.710 1.819  -1.854 1.621  C32 U52 32 
U52 C33 C23 C  0 1 N N N 18.414 16.587 12.078 2.983  -5.756 0.288  C33 U52 33 
U52 C34 C24 C  0 1 N N N 21.597 17.558 15.873 0.450  -2.843 3.463  C34 U52 34 
U52 H1  H1  H  0 1 N N N 9.435  14.094 14.622 -3.090 -1.541 -0.497 H1  U52 35 
U52 H2  H2  H  0 1 N N N 8.195  15.373 14.392 -3.433 -0.691 -2.023 H2  U52 36 
U52 H3  H3  H  0 1 N N N 12.910 18.007 9.739  -4.263 4.335  2.000  H3  U52 37 
U52 H4  H4  H  0 1 N N N 12.648 16.273 9.354  -2.642 4.424  2.731  H4  U52 38 
U52 H5  H5  H  0 1 N N N 11.346 17.470 9.039  -2.978 5.275  1.205  H5  U52 39 
U52 H6  H6  H  0 1 N N N 14.271 20.284 12.844 1.508  4.623  0.878  H6  U52 40 
U52 H7  H7  H  0 1 N N N 11.694 18.132 15.495 0.588  0.899  -1.007 H7  U52 41 
U52 H8  H8  H  0 1 N N N 16.429 20.874 18.732 5.948  -0.241 -1.459 H8  U52 42 
U52 H9  H9  H  0 1 N N N 18.207 19.045 13.100 3.393  -3.353 -0.949 H9  U52 43 
U52 H10 H10 H  0 1 N N N 16.758 18.152 13.671 3.906  -3.241 0.752  H10 U52 44 
U52 H11 H11 H  0 1 N N N 6.385  10.940 15.559 -6.752 -3.432 -2.803 H11 U52 45 
U52 H12 H12 H  0 1 N N N 5.407  11.911 14.408 -5.658 -4.837 -2.793 H12 U52 46 
U52 H13 H13 H  0 1 N N N 6.692  10.817 13.793 -6.409 -4.282 -1.277 H13 U52 47 
U52 H14 H14 H  0 1 N N N 7.876  12.694 15.556 -3.971 -3.314 -2.324 H14 U52 48 
U52 H15 H15 H  0 1 N N N 10.213 16.341 14.609 -1.763 0.009  -0.970 H15 U52 49 
U52 H16 H16 H  0 1 N N N 13.534 18.877 10.964 -0.832 4.887  1.559  H16 U52 50 
U52 H17 H17 H  0 1 N N N 12.876 20.650 15.817 3.050  3.388  -0.708 H17 U52 51 
U52 H18 H18 H  0 1 N N N 18.070 16.195 14.158 1.314  -4.503 -0.253 H18 U52 52 
U52 H19 H19 H  0 1 N N N 20.513 16.118 13.789 1.004  -5.167 2.102  H19 U52 53 
U52 H20 H20 H  0 1 N N N 20.506 17.862 13.358 2.516  -4.339 2.549  H20 U52 54 
U52 H21 H21 H  0 1 N N N 19.662 16.654 16.036 0.030  -3.026 1.357  H21 U52 55 
U52 H22 H22 H  0 1 N N N 19.978 19.577 15.274 2.684  -1.835 2.284  H22 U52 56 
U52 H23 H23 H  0 1 N N N 19.323 18.892 16.800 1.274  -0.915 1.709  H23 U52 57 
U52 H24 H24 H  0 1 N N N 18.930 15.632 11.903 3.833  -5.722 0.968  H24 U52 58 
U52 H25 H25 H  0 1 N N N 17.350 16.481 11.821 2.355  -6.613 0.533  H25 U52 59 
U52 H26 H26 H  0 1 N N N 18.866 17.368 11.450 3.341  -5.851 -0.737 H26 U52 60 
U52 H27 H27 H  0 1 N N N 21.648 17.821 16.940 1.323  -2.830 4.116  H27 U52 61 
U52 H28 H28 H  0 1 N N N 22.099 16.593 15.709 -0.094 -1.904 3.566  H28 U52 62 
U52 H29 H29 H  0 1 N N N 22.097 18.337 15.279 -0.200 -3.672 3.742  H29 U52 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
U52 C8  N9  SING N N 1  
U52 O7  C10 DOUB N N 2  
U52 N9  C10 SING N N 3  
U52 N9  C15 SING N N 4  
U52 C10 C11 SING N N 5  
U52 C14 C15 DOUB Y N 6  
U52 C14 C13 SING Y N 7  
U52 C33 C29 SING N N 8  
U52 C15 C16 SING Y N 9  
U52 C11 O6  SING N N 10 
U52 C11 C12 DOUB N N 11 
U52 O3  C4  DOUB N N 12 
U52 O6  C5  SING N N 13 
U52 C13 C18 DOUB Y N 14 
U52 C16 C12 SING N N 15 
U52 C16 C17 DOUB Y N 16 
U52 C29 C28 SING N N 17 
U52 C29 C30 SING N N 18 
U52 C4  C5  SING N N 19 
U52 C4  N2  SING N N 20 
U52 C28 N20 SING N N 21 
U52 C30 C31 SING N N 22 
U52 C18 C17 SING Y N 23 
U52 C18 N19 SING N N 24 
U52 C1  N2  SING N N 25 
U52 N20 C32 SING N N 26 
U52 N20 C24 SING N N 27 
U52 N23 C24 DOUB Y N 28 
U52 N23 C22 SING Y N 29 
U52 N19 C22 SING N N 30 
U52 C31 C32 SING N N 31 
U52 C31 C34 SING N N 32 
U52 C24 N25 SING Y N 33 
U52 C22 C27 DOUB Y N 34 
U52 N25 C26 DOUB Y N 35 
U52 C27 C26 SING Y N 36 
U52 C27 CL1 SING N N 37 
U52 C5  H1  SING N N 38 
U52 C5  H2  SING N N 39 
U52 C8  H3  SING N N 40 
U52 C8  H4  SING N N 41 
U52 C8  H5  SING N N 42 
U52 C13 H6  SING N N 43 
U52 C17 H7  SING N N 44 
U52 C26 H8  SING N N 45 
U52 C28 H9  SING N N 46 
U52 C28 H10 SING N N 47 
U52 C1  H11 SING N N 48 
U52 C1  H12 SING N N 49 
U52 C1  H13 SING N N 50 
U52 N2  H14 SING N N 51 
U52 C12 H15 SING N N 52 
U52 C14 H16 SING N N 53 
U52 N19 H17 SING N N 54 
U52 C29 H18 SING N N 55 
U52 C30 H19 SING N N 56 
U52 C30 H20 SING N N 57 
U52 C31 H21 SING N N 58 
U52 C32 H22 SING N N 59 
U52 C32 H23 SING N N 60 
U52 C33 H24 SING N N 61 
U52 C33 H25 SING N N 62 
U52 C33 H26 SING N N 63 
U52 C34 H27 SING N N 64 
U52 C34 H28 SING N N 65 
U52 C34 H29 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
U52 InChI            InChI                1.03  "InChI=1S/C24H29ClN6O3/c1-14-7-15(2)12-31(11-14)24-27-10-18(25)22(29-24)28-17-5-6-19-16(8-17)9-20(23(33)30(19)4)34-13-21(32)26-3/h5-6,8-10,14-15H,7,11-13H2,1-4H3,(H,26,32)(H,27,28,29)/t14-,15+" 
U52 InChIKey         InChI                1.03  GXTJETQFYHZHNB-GASCZTMLSA-N                                                                                                                                                                       
U52 SMILES_CANONICAL CACTVS               3.385 "CNC(=O)COC1=Cc2cc(Nc3nc(ncc3Cl)N4C[C@@H](C)C[C@@H](C)C4)ccc2N(C)C1=O"                                                                                                                            
U52 SMILES           CACTVS               3.385 "CNC(=O)COC1=Cc2cc(Nc3nc(ncc3Cl)N4C[CH](C)C[CH](C)C4)ccc2N(C)C1=O"                                                                                                                                
U52 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@H]1C[C@@H](CN(C1)c2ncc(c(n2)Nc3ccc4c(c3)C=C(C(=O)N4C)OCC(=O)NC)Cl)C"                                                                                                                        
U52 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1CC(CN(C1)c2ncc(c(n2)Nc3ccc4c(c3)C=C(C(=O)N4C)OCC(=O)NC)Cl)C"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
U52 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[6-[[5-chloranyl-2-[(3~{S},5~{R})-3,5-dimethylpiperidin-1-yl]pyrimidin-4-yl]amino]-1-methyl-2-oxidanylidene-quinolin-3-yl]oxy-~{N}-methyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
U52 "Create component" 2017-01-18 EBI  
U52 "Initial release"  2017-10-04 RCSB 
# 
