data_5V3
# 
_chem_comp.id                                    5V3 
_chem_comp.name                                  "8-[[(phenylmethyl)amino]methyl]-1~{H}-pyrido[3,4-d]pyrimidin-4-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H14 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-04 
_chem_comp.pdbx_modified_date                    2015-12-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        266.298 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5V3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F5C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5V3 C10 C1  C 0 1 Y N N 8.843  -4.413 20.289 -1.136 -1.134 -0.615 C10 5V3 1  
5V3 C13 C2  C 0 1 Y N N 8.888  -1.974 18.844 -3.401 -1.492 0.901  C13 5V3 2  
5V3 C01 C3  C 0 1 N N N 6.582  -4.659 22.139 2.466  -0.407 -1.342 C01 5V3 3  
5V3 C02 C4  C 0 1 Y N N 6.529  -4.758 23.705 3.586  -0.009 -0.416 C02 5V3 4  
5V3 C03 C5  C 0 1 Y N N 5.418  -5.308 24.315 4.368  -0.980 0.181  C03 5V3 5  
5V3 C04 C6  C 0 1 Y N N 5.348  -5.426 25.717 5.395  -0.614 1.031  C04 5V3 6  
5V3 C05 C7  C 0 1 Y N N 6.389  -4.967 26.490 5.641  0.723  1.282  C05 5V3 7  
5V3 C06 C8  C 0 1 Y N N 7.503  -4.407 25.882 4.860  1.694  0.684  C06 5V3 8  
5V3 C07 C9  C 0 1 Y N N 7.569  -4.307 24.485 3.836  1.329  -0.169 C07 5V3 9  
5V3 N08 N1  N 0 1 N N N 7.243  -5.791 21.459 1.229  -0.578 -0.569 N08 5V3 10 
5V3 C09 C10 C 0 1 N N N 8.666  -5.700 21.107 0.113  -0.968 -1.441 C09 5V3 11 
5V3 C11 C11 C 0 1 Y N N 9.982  -3.556 20.434 -1.980 -0.050 -0.408 C11 5V3 12 
5V3 C12 C12 C 0 1 Y N N 10.026 -2.368 19.721 -3.140 -0.232 0.368  C12 5V3 13 
5V3 C14 C13 C 0 1 Y N N 7.823  -2.839 18.754 -2.512 -2.513 0.635  C14 5V3 14 
5V3 N15 N2  N 0 1 Y N N 7.787  -4.020 19.444 -1.429 -2.307 -0.093 N15 5V3 15 
5V3 C16 C14 C 0 1 N N N 11.208 -1.460 19.827 -4.024 0.928  0.577  C16 5V3 16 
5V3 N17 N3  N 0 1 N N N 12.279 -1.869 20.654 -3.670 2.099  0.013  N17 5V3 17 
5V3 C18 C15 C 0 1 N N N 12.247 -3.092 21.391 -2.582 2.217  -0.699 C18 5V3 18 
5V3 N19 N4  N 0 1 N N N 11.083 -3.962 21.293 -1.732 1.201  -0.930 N19 5V3 19 
5V3 O20 O1  O 0 1 N N N 11.218 -0.422 19.217 -5.042 0.832  1.239  O20 5V3 20 
5V3 H1  H1  H 0 1 N N N 8.899  -1.042 18.298 -4.282 -1.667 1.502  H1  5V3 21 
5V3 H2  H2  H 0 1 N N N 7.125  -3.739 21.874 2.321  0.370  -2.093 H2  5V3 22 
5V3 H3  H3  H 0 1 N N N 5.549  -4.595 21.767 2.719  -1.346 -1.836 H3  5V3 23 
5V3 H4  H4  H 0 1 N N N 4.593  -5.652 23.709 4.175  -2.024 -0.015 H4  5V3 24 
5V3 H5  H5  H 0 1 N N N 4.482  -5.874 26.182 6.005  -1.373 1.498  H5  5V3 25 
5V3 H6  H6  H 0 1 N N N 6.339  -5.042 27.566 6.444  1.009  1.946  H6  5V3 26 
5V3 H7  H7  H 0 1 N N N 8.322  -4.047 26.487 5.052  2.738  0.881  H7  5V3 27 
5V3 H8  H8  H 0 1 N N N 8.441  -3.873 24.018 3.228  2.087  -0.639 H8  5V3 28 
5V3 H9  H9  H 0 1 N N N 6.743  -5.949 20.607 1.008  0.259  -0.051 H9  5V3 29 
5V3 H11 H11 H 0 1 N N N 8.964  -6.573 20.508 0.350  -1.910 -1.935 H11 5V3 30 
5V3 H12 H12 H 0 1 N N N 9.279  -5.655 22.019 -0.048 -0.195 -2.192 H12 5V3 31 
5V3 H13 H13 H 0 1 N N N 6.989  -2.578 18.119 -2.698 -3.497 1.040  H13 5V3 32 
5V3 H14 H14 H 0 1 N N N 13.081 -3.370 22.018 -2.353 3.182  -1.126 H14 5V3 33 
5V3 H15 H15 H 0 1 N N N 11.042 -4.820 21.805 -0.938 1.350  -1.468 H15 5V3 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5V3 C14 C13 DOUB Y N 1  
5V3 C14 N15 SING Y N 2  
5V3 C13 C12 SING Y N 3  
5V3 O20 C16 DOUB N N 4  
5V3 N15 C10 DOUB Y N 5  
5V3 C12 C16 SING N N 6  
5V3 C12 C11 DOUB Y N 7  
5V3 C16 N17 SING N N 8  
5V3 C10 C11 SING Y N 9  
5V3 C10 C09 SING N N 10 
5V3 C11 N19 SING N N 11 
5V3 N17 C18 DOUB N N 12 
5V3 C09 N08 SING N N 13 
5V3 N19 C18 SING N N 14 
5V3 N08 C01 SING N N 15 
5V3 C01 C02 SING N N 16 
5V3 C02 C03 DOUB Y N 17 
5V3 C02 C07 SING Y N 18 
5V3 C03 C04 SING Y N 19 
5V3 C07 C06 DOUB Y N 20 
5V3 C04 C05 DOUB Y N 21 
5V3 C06 C05 SING Y N 22 
5V3 C13 H1  SING N N 23 
5V3 C01 H2  SING N N 24 
5V3 C01 H3  SING N N 25 
5V3 C03 H4  SING N N 26 
5V3 C04 H5  SING N N 27 
5V3 C05 H6  SING N N 28 
5V3 C06 H7  SING N N 29 
5V3 C07 H8  SING N N 30 
5V3 N08 H9  SING N N 31 
5V3 C09 H11 SING N N 32 
5V3 C09 H12 SING N N 33 
5V3 C14 H13 SING N N 34 
5V3 C18 H14 SING N N 35 
5V3 N19 H15 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5V3 InChI            InChI                1.03  "InChI=1S/C15H14N4O/c20-15-12-6-7-17-13(14(12)18-10-19-15)9-16-8-11-4-2-1-3-5-11/h1-7,10,16H,8-9H2,(H,18,19,20)" 
5V3 InChIKey         InChI                1.03  YIEUEKVBIVGYSC-UHFFFAOYSA-N                                                                                      
5V3 SMILES_CANONICAL CACTVS               3.385 "O=C1N=CNc2c(CNCc3ccccc3)nccc12"                                                                                 
5V3 SMILES           CACTVS               3.385 "O=C1N=CNc2c(CNCc3ccccc3)nccc12"                                                                                 
5V3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc(cc1)CNCc2c3c(ccn2)C(=O)N=CN3"                                                                             
5V3 SMILES           "OpenEye OEToolkits" 2.0.4 "c1ccc(cc1)CNCc2c3c(ccn2)C(=O)N=CN3"                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5V3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "8-[[(phenylmethyl)amino]methyl]-1~{H}-pyrido[3,4-d]pyrimidin-4-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5V3 "Create component" 2015-12-04 EBI  
5V3 "Initial release"  2015-12-29 RCSB 
# 
