data_823
# 
_chem_comp.id                                    823 
_chem_comp.name                                  "N,N-bis(3-sulfanylpropyl)-L-asparagine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H20 N2 O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ASN 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-02-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        280.407 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     823 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4OS7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
823 C   C   C 0 1 N N N Y N Y -0.209 -16.449 -14.848 3.521  -2.286 0.165  C   823 1  
823 N   N   N 0 1 N N N Y Y N 1.545  -17.859 -13.843 1.343  -3.364 0.161  N   823 2  
823 CA  CA  C 0 1 N N S Y N N 0.189  -17.850 -14.353 2.106  -2.218 -0.351 CA  823 3  
823 CB  CB  C 0 1 N N N N N N -0.803 -18.520 -13.399 1.453  -0.918 0.123  CB  823 4  
823 CG  CG  C 0 1 N N N N N N -1.028 -17.762 -12.102 0.083  -0.791 -0.492 CG  823 5  
823 OD2 OD2 O 0 1 N N N N N N -1.362 -16.625 -12.288 -0.330 -1.656 -1.236 OD2 823 6  
823 ND  ND  N 0 1 N N N N N N -0.899 -18.275 -10.813 -0.683 0.282  -0.216 ND  823 7  
823 O   O   O 0 1 N N N Y N Y 0.249  -15.416 -14.338 3.777  -2.951 1.140  O   823 8  
823 CE  CE  C 0 1 N N N N N N -0.530 -19.676 -10.544 -2.015 0.405  -0.814 CE  823 9  
823 CE2 CE2 C 0 1 N N N N N N -1.163 -17.493 -9.599  -0.184 1.326  0.683  CE2 823 10 
823 CZ2 CZ2 C 0 1 N N N N N N -2.634 -17.073 -9.506  0.560  2.387  -0.131 CZ2 823 11 
823 CH2 CH2 C 0 1 N N N N N N -2.879 -16.200 -8.284  1.081  3.477  0.808  CH2 823 12 
823 ST2 ST2 S 0 1 N N N N N N -2.138 -14.532 -8.325  1.963  4.735  -0.157 ST2 823 13 
823 CZ  CZ  C 0 1 N N N N N N 0.797  -19.934 -9.816  -3.049 -0.249 0.105  CZ  823 14 
823 CH  CH  C 0 1 N N N N N N 0.785  -21.343 -9.242  -4.440 -0.120 -0.520 CH  823 15 
823 ST  ST  S 0 1 N N N N N N 0.669  -22.704 -10.464 -5.666 -0.896 0.569  ST  823 16 
823 H2  H2  H 0 1 N Y N Y Y N 1.777  -18.779 -13.529 1.717  -4.233 -0.191 H2  823 17 
823 H   H3  H 0 1 N N N Y Y N 2.176  -17.586 -14.569 1.321  -3.362 1.170  H3  823 18 
823 HA  H5  H 0 1 N N N Y N N 0.197  -18.482 -15.253 2.115  -2.244 -1.440 H5  823 19 
823 H6  H6  H 0 1 N N N N N N -1.769 -18.614 -13.916 1.364  -0.931 1.209  H6  823 20 
823 H7  H7  H 0 1 N N N N N N -0.421 -19.521 -13.152 2.068  -0.071 -0.181 H7  823 21 
823 H8  H8  H 0 1 N N N N N N -1.332 -20.116 -9.933  -2.259 1.460  -0.943 H8  823 22 
823 H9  H9  H 0 1 N N N N N N -0.480 -20.195 -11.513 -2.025 -0.091 -1.784 H9  823 23 
823 H10 H10 H 0 1 N N N N N N -0.910 -18.103 -8.719  -1.023 1.789  1.203  H10 823 24 
823 H11 H11 H 0 1 N N N N N N -0.534 -16.590 -9.612  0.495  0.884  1.411  H11 823 25 
823 H12 H12 H 0 1 N N N N N N -2.904 -16.509 -10.411 1.398  1.924  -0.651 H12 823 26 
823 H13 H13 H 0 1 N N N N N N -3.261 -17.974 -9.435  -0.120 2.829  -0.859 H13 823 27 
823 H14 H14 H 0 1 N N N N N N -3.966 -16.082 -8.168  0.242  3.940  1.327  H14 823 28 
823 H15 H15 H 0 1 N N N N N N -2.472 -16.727 -7.408  1.761  3.035  1.536  H15 823 29 
823 H16 H16 H 0 1 N Y N N N N -2.510 -14.043 -7.179  2.358  5.614  0.781  H16 823 30 
823 H17 H17 H 0 1 N N N N N N 1.632  -19.832 -10.525 -2.805 -1.303 0.234  H17 823 31 
823 H18 H18 H 0 1 N N N N N N 0.918  -19.205 -9.001  -3.039 0.248  1.075  H18 823 32 
823 H19 H19 H 0 1 N N N N N N -0.078 -21.424 -8.565  -4.684 0.934  -0.649 H19 823 33 
823 H20 H20 H 0 1 N N N N N N 1.714  -21.482 -8.670  -4.450 -0.617 -1.490 H20 823 34 
823 H21 H21 H 0 1 N Y N N N N 0.680  -23.755 -9.699  -6.820 -0.711 -0.094 H21 823 35 
823 OXT OXT O 0 1 N Y N Y N Y ?      ?       ?       4.497  -1.612 -0.463 OXT 823 36 
823 HXT H1  H 0 1 N Y N Y N Y ?      ?       ?       5.389  -1.686 -0.095 H1  823 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
823 C   CA  SING N N 1  
823 C   O   DOUB N N 2  
823 CA  N   SING N N 3  
823 CA  CB  SING N N 4  
823 CB  CG  SING N N 5  
823 OD2 CG  DOUB N N 6  
823 CG  ND  SING N N 7  
823 ND  CE  SING N N 8  
823 ND  CE2 SING N N 9  
823 CE  CZ  SING N N 10 
823 ST  CH  SING N N 11 
823 CZ  CH  SING N N 12 
823 CE2 CZ2 SING N N 13 
823 CZ2 CH2 SING N N 14 
823 ST2 CH2 SING N N 15 
823 N   H2  SING N N 16 
823 N   H   SING N N 17 
823 CA  HA  SING N N 18 
823 CB  H6  SING N N 19 
823 CB  H7  SING N N 20 
823 CE  H8  SING N N 21 
823 CE  H9  SING N N 22 
823 CE2 H10 SING N N 23 
823 CE2 H11 SING N N 24 
823 CZ2 H12 SING N N 25 
823 CZ2 H13 SING N N 26 
823 CH2 H14 SING N N 27 
823 CH2 H15 SING N N 28 
823 ST2 H16 SING N N 29 
823 CZ  H17 SING N N 30 
823 CZ  H18 SING N N 31 
823 CH  H19 SING N N 32 
823 CH  H20 SING N N 33 
823 ST  H21 SING N N 34 
823 C   OXT SING N N 35 
823 OXT HXT SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
823 SMILES           ACDLabs              12.01 "O=C(O)C(N)CC(=O)N(CCCS)CCCS"                                                                             
823 InChI            InChI                1.03  "InChI=1S/C10H20N2O3S2/c11-8(10(14)15)7-9(13)12(3-1-5-16)4-2-6-17/h8,16-17H,1-7,11H2,(H,14,15)/t8-/m0/s1" 
823 InChIKey         InChI                1.03  OOYMTWWRMCVFLL-QMMMGPOBSA-N                                                                               
823 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CC(=O)N(CCCS)CCCS)C(O)=O"                                                                        
823 SMILES           CACTVS               3.385 "N[CH](CC(=O)N(CCCS)CCCS)C(O)=O"                                                                          
823 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(CN(CCCS)C(=O)C[C@@H](C(=O)O)N)CS"                                                                      
823 SMILES           "OpenEye OEToolkits" 1.7.6 "C(CN(CCCS)C(=O)CC(C(=O)O)N)CS"                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
823 "SYSTEMATIC NAME" ACDLabs              12.01 "N,N-bis(3-sulfanylpropyl)-L-asparagine"                                     
823 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-4-[bis(3-sulfanylpropyl)amino]-4-oxidanylidene-butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
823 "Create component" 2014-02-19 RCSB 
823 "Initial release"  2014-09-24 RCSB 
823 "Modify backbone"  2023-11-03 PDBE 
823 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            823 
_pdbx_chem_comp_pcm.modified_residue_id                ASN 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
