data_I53
# 
_chem_comp.id                                    I53 
_chem_comp.name                                  "2-[2-[[3-(1~{H}-benzimidazol-2-ylamino)propylamino]methyl]-4,6-bis(chloranyl)indol-1-yl]ethanol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H23 Cl2 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-10-23 
_chem_comp.pdbx_modified_date                    2017-04-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        432.346 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I53 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EEJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I53 C1  C1  C  0 1 N N N -40.275 11.053 7.914  2.722   2.037  -1.174 C1  I53 1  
I53 C2  C2  C  0 1 Y N N -42.236 12.622 7.472  2.497   -0.465 -1.057 C2  I53 2  
I53 C3  C3  C  0 1 N N N -43.266 11.532 7.578  1.090   -0.537 -1.590 C3  I53 3  
I53 C4  C4  C  0 1 N N N -44.029 11.725 9.967  -1.247  -0.399 -0.973 C4  I53 4  
I53 C6  C5  C  0 1 N N N -44.923 12.106 12.312 -3.650  -0.251 -0.304 C6  I53 5  
I53 C7  C6  C  0 1 Y N N -43.906 14.032 13.455 -5.931  -0.064 0.607  C7  I53 6  
I53 C8  C7  C  0 1 Y N N -43.473 15.815 14.587 -8.078  0.023  0.982  C8  I53 7  
I53 C9  C8  C  0 1 Y N N -42.899 16.906 15.235 -9.371  0.127  1.502  C9  I53 8  
I53 C11 C9  C  0 1 Y N N -45.100 17.564 15.992 -10.278 -0.244 -0.688 C11 I53 9  
I53 C12 C10 C  0 1 Y N N -45.682 16.481 15.350 -9.008  -0.349 -1.217 C12 I53 10 
I53 C13 C11 C  0 1 Y N N -44.851 15.618 14.653 -7.903  -0.217 -0.391 C13 I53 11 
I53 C14 C12 C  0 1 Y N N -42.403 13.951 7.224  3.239   -1.523 -0.693 C14 I53 12 
I53 C15 C13 C  0 1 Y N N -41.109 14.572 7.223  4.531   -1.005 -0.239 C15 I53 13 
I53 C16 C14 C  0 1 Y N N -40.594 15.860 7.040  5.697   -1.599 0.252  C16 I53 14 
I53 C17 C15 C  0 1 Y N N -39.240 16.126 7.107  6.763   -0.817 0.600  C17 I53 15 
I53 C18 C16 C  0 1 Y N N -38.373 15.085 7.363  6.695   0.565  0.470  C18 I53 16 
I53 C20 C17 C  0 1 Y N N -40.185 13.551 7.481  4.458   0.393  -0.372 C20 I53 17 
I53 CL1 CL1 CL 0 0 N N N -36.664 15.410 7.450  8.061   1.538  0.919  CL1 I53 18 
I53 CL  CL2 CL 0 0 N N N -41.672 17.179 6.716  5.792   -3.324 0.419  CL  I53 19 
I53 C19 C18 C  0 1 Y N N -38.818 13.793 7.554  5.555   1.171  -0.012 C19 I53 20 
I53 N   N1  N  0 1 Y N N -40.877 12.361 7.633  3.212   0.689  -0.877 N   I53 21 
I53 C   C19 C  0 1 N N N -40.784 10.456 9.206  2.037   2.616  0.065  C   I53 22 
I53 O   O1  O  0 1 N N N -40.491 11.300 10.306 1.560   3.931  -0.225 O   I53 23 
I53 N1  N2  N  0 1 N N N -44.326 11.815 8.536  0.138   -0.335 -0.489 N1  I53 24 
I53 C5  C20 C  0 1 N N N -45.193 12.181 10.823 -2.207  -0.185 0.200  C5  I53 25 
I53 N2  N3  N  0 1 N N N -43.791 12.934 12.704 -4.569  -0.047 0.819  N2  I53 26 
I53 N4  N4  N  0 1 Y N N -45.098 14.471 13.920 -6.535  -0.268 -0.601 N4  I53 27 
I53 N3  N5  N  0 1 Y N N -42.894 14.801 13.825 -6.839  0.106  1.535  N3  I53 28 
I53 C10 C21 C  0 1 Y N N -43.725 17.774 15.935 -10.457 -0.007 0.667  C10 I53 29 
I53 H1  H1  H  0 1 N N N -40.516 10.368 7.088  3.561   2.674  -1.457 H1  I53 30 
I53 H2  H2  H  0 1 N N N -39.184 11.173 7.985  2.008   1.991  -1.996 H2  I53 31 
I53 H3  H3  H  0 1 N N N -43.723 11.389 6.588  0.946   0.240  -2.341 H3  I53 32 
I53 H4  H4  H  0 1 N N N -42.760 10.605 7.885  0.922   -1.515 -2.042 H4  I53 33 
I53 H5  H5  H  0 1 N N N -43.795 10.679 10.215 -1.408  0.379  -1.720 H5  I53 34 
I53 H6  H6  H  0 1 N N N -43.157 12.358 10.188 -1.432  -1.376 -1.420 H6  I53 35 
I53 H7  H7  H  0 1 N N N -45.818 12.449 12.853 -3.810  0.526  -1.051 H7  I53 36 
I53 H8  H8  H  0 1 N N N -44.709 11.061 12.582 -3.835  -1.228 -0.751 H8  I53 37 
I53 H9  H9  H  0 1 N N N -41.833 17.073 15.194 -9.517  0.311  2.556  H9  I53 38 
I53 H10 H10 H  0 1 N N N -45.722 18.254 16.543 -11.138 -0.347 -1.332 H10 I53 39 
I53 H11 H11 H  0 1 N N N -46.748 16.315 15.392 -8.876  -0.534 -2.273 H11 I53 40 
I53 H12 H12 H  0 1 N N N -43.346 14.451 7.057  2.939   -2.560 -0.729 H12 I53 41 
I53 H13 H13 H  0 1 N N N -38.868 17.129 6.962  7.664   -1.276 0.979  H13 I53 42 
I53 H14 H14 H  0 1 N N N -38.123 12.991 7.755  5.512   2.246  -0.109 H14 I53 43 
I53 H15 H15 H  0 1 N N N -41.874 10.322 9.136  1.199   1.979  0.348  H15 I53 44 
I53 H16 H16 H  0 1 N N N -40.304 9.479  9.364  2.752   2.662  0.887  H16 I53 45 
I53 H17 H17 H  0 1 N N N -40.820 10.905 11.105 1.113   4.360  0.518  H17 I53 46 
I53 H18 H18 H  0 1 N N N -44.640 12.748 8.359  0.294   -1.004 0.250  H18 I53 47 
I53 H20 H20 H  0 1 N N N -45.426 13.225 10.565 -2.047  -0.963 0.947  H20 I53 48 
I53 H21 H21 H  0 1 N N N -46.061 11.545 10.595 -2.022  0.792  0.647  H21 I53 49 
I53 H22 H22 H  0 1 N N N -43.168 12.328 13.199 -4.219  0.101  1.711  H22 I53 50 
I53 H23 H23 H  0 1 N N N -45.990 14.046 13.763 -6.088  -0.420 -1.449 H23 I53 51 
I53 H25 H25 H  0 1 N N N -43.295 18.625 16.443 -11.456 0.073  1.070  H25 I53 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I53 CL  C16 SING N N 1  
I53 C16 C17 DOUB Y N 2  
I53 C16 C15 SING Y N 3  
I53 C17 C18 SING Y N 4  
I53 C15 C14 SING Y N 5  
I53 C15 C20 DOUB Y N 6  
I53 C14 C2  DOUB Y N 7  
I53 C18 CL1 SING N N 8  
I53 C18 C19 DOUB Y N 9  
I53 C2  C3  SING N N 10 
I53 C2  N   SING Y N 11 
I53 C20 C19 SING Y N 12 
I53 C20 N   SING Y N 13 
I53 C3  N1  SING N N 14 
I53 N   C1  SING N N 15 
I53 C1  C   SING N N 16 
I53 N1  C4  SING N N 17 
I53 C   O   SING N N 18 
I53 C4  C5  SING N N 19 
I53 C5  C6  SING N N 20 
I53 C6  N2  SING N N 21 
I53 N2  C7  SING N N 22 
I53 C7  N3  DOUB Y N 23 
I53 C7  N4  SING Y N 24 
I53 N3  C8  SING Y N 25 
I53 N4  C13 SING Y N 26 
I53 C8  C13 DOUB Y N 27 
I53 C8  C9  SING Y N 28 
I53 C13 C12 SING Y N 29 
I53 C9  C10 DOUB Y N 30 
I53 C12 C11 DOUB Y N 31 
I53 C10 C11 SING Y N 32 
I53 C1  H1  SING N N 33 
I53 C1  H2  SING N N 34 
I53 C3  H3  SING N N 35 
I53 C3  H4  SING N N 36 
I53 C4  H5  SING N N 37 
I53 C4  H6  SING N N 38 
I53 C6  H7  SING N N 39 
I53 C6  H8  SING N N 40 
I53 C9  H9  SING N N 41 
I53 C11 H10 SING N N 42 
I53 C12 H11 SING N N 43 
I53 C14 H12 SING N N 44 
I53 C17 H13 SING N N 45 
I53 C19 H14 SING N N 46 
I53 C   H15 SING N N 47 
I53 C   H16 SING N N 48 
I53 O   H17 SING N N 49 
I53 N1  H18 SING N N 50 
I53 C5  H20 SING N N 51 
I53 C5  H21 SING N N 52 
I53 N2  H22 SING N N 53 
I53 N4  H23 SING N N 54 
I53 C10 H25 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I53 InChI            InChI                1.03  "InChI=1S/C21H23Cl2N5O/c22-14-10-17(23)16-12-15(28(8-9-29)20(16)11-14)13-24-6-3-7-25-21-26-18-4-1-2-5-19(18)27-21/h1-2,4-5,10-12,24,29H,3,6-9,13H2,(H2,25,26,27)" 
I53 InChIKey         InChI                1.03  JCEOIIIPEPYSSD-UHFFFAOYSA-N                                                                                                                                       
I53 SMILES_CANONICAL CACTVS               3.385 "OCCn1c(CNCCCNc2[nH]c3ccccc3n2)cc4c(Cl)cc(Cl)cc14"                                                                                                                
I53 SMILES           CACTVS               3.385 "OCCn1c(CNCCCNc2[nH]c3ccccc3n2)cc4c(Cl)cc(Cl)cc14"                                                                                                                
I53 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc2c(c1)[nH]c(n2)NCCCNCc3cc4c(n3CCO)cc(cc4Cl)Cl"                                                                                                              
I53 SMILES           "OpenEye OEToolkits" 2.0.4 "c1ccc2c(c1)[nH]c(n2)NCCCNCc3cc4c(n3CCO)cc(cc4Cl)Cl"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
I53 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "2-[2-[[3-(1~{H}-benzimidazol-2-ylamino)propylamino]methyl]-4,6-bis(chloranyl)indol-1-yl]ethanol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I53 "Create component" 2015-10-23 RCSB 
I53 "Initial release"  2017-04-12 RCSB 
# 
