data_IT3
# 
_chem_comp.id                                    IT3 
_chem_comp.name                                  "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2R)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H37 N3 O8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-01-27 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        491.599 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IT3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7TQ6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IT3 C15 C1  C 0 1 N N N N N N 14.408 22.305 27.777 -0.817 1.343  2.071  C15 IT3 1  
IT3 C19 C2  C 0 1 N N N N N N 10.791 24.169 26.047 2.928  -0.287 0.182  C19 IT3 2  
IT3 C22 C3  C 0 1 N N R N N N 9.550  27.560 24.726 6.514  -0.472 -0.661 C22 IT3 3  
IT3 C16 C4  C 0 1 N N N N N N 14.806 21.505 26.534 -0.573 0.245  3.108  C16 IT3 4  
IT3 C17 C5  C 0 1 N N N N N N 15.525 22.208 28.871 -1.024 2.681  2.784  C17 IT3 5  
IT3 C24 C6  C 0 1 N N N N N N 9.832  28.087 23.323 7.253  -1.719 -1.148 C24 IT3 6  
IT3 C25 C7  C 0 1 N N N N N N 11.560 29.370 24.878 9.073  0.034  -0.468 C25 IT3 7  
IT3 C26 C8  C 0 1 N N N N N N 12.690 29.271 25.948 10.308 -0.407 0.320  C26 IT3 8  
IT3 C27 C9  C 0 1 N N N N N N 13.187 30.582 26.591 11.505 0.459  -0.080 C27 IT3 9  
IT3 O28 O1  O 0 1 N N N N N N 10.212 23.383 25.303 2.886  -0.788 1.289  O28 IT3 10 
IT3 N11 N1  N 0 1 N N N N N N 10.021 20.460 27.411 -1.867 -0.175 -0.153 N11 IT3 11 
IT3 C01 C10 C 0 1 N N S N N N 9.036  18.476 28.454 -3.217 1.115  -1.732 C01 IT3 12 
IT3 C03 C11 C 0 1 N N S N N N 8.761  19.882 27.843 -2.991 -0.254 -1.089 C03 IT3 13 
IT3 C04 C12 C 0 1 N N N N N N 7.750  19.758 26.677 -4.253 -0.677 -0.334 C04 IT3 14 
IT3 C05 C13 C 0 1 N N S N N N 7.360  21.101 26.057 -4.088 -2.111 0.174  C05 IT3 15 
IT3 C06 C14 C 0 1 N N N N N N 6.391  21.050 24.882 -5.327 -2.555 0.919  C06 IT3 16 
IT3 C08 C15 C 0 1 N N N N N N 5.478  22.671 26.285 -4.748 -4.325 -0.468 C08 IT3 17 
IT3 C09 C16 C 0 1 N N N N N N 6.528  21.878 27.081 -3.985 -3.097 -1.012 C09 IT3 18 
IT3 C12 C17 C 0 1 N N N N N N 10.479 21.703 27.752 -0.616 0.015  -0.618 C12 IT3 19 
IT3 C13 C18 C 0 1 N N S N N N 11.863 22.256 27.227 0.535  0.143  0.347  C13 IT3 20 
IT3 C14 C19 C 0 1 N N N N N N 12.979 21.938 28.268 0.393  1.443  1.140  C14 IT3 21 
IT3 C21 C20 C 0 1 N N N N N N 9.424  26.018 25.062 5.282  -0.680 0.222  C21 IT3 22 
IT3 C23 C21 C 0 1 N N S N N N 10.981 28.060 24.318 7.877  -0.832 -0.067 C23 IT3 23 
IT3 N07 N2  N 0 1 N N N N N N 5.330  21.939 25.034 -5.677 -3.795 0.537  N07 IT3 24 
IT3 N18 N3  N 0 1 N N N N N N 11.755 23.694 26.926 1.797  0.160  -0.398 N18 IT3 25 
IT3 O02 O2  O 0 1 N N N N N N 7.826  17.939 28.946 -4.384 1.068  -2.555 O02 IT3 26 
IT3 O10 O3  O 0 1 N N N N N N 6.549  20.299 23.937 -5.918 -1.889 1.743  O10 IT3 27 
IT3 O20 O4  O 0 1 N N N N N N 10.441 25.506 25.983 4.104  -0.178 -0.463 O20 IT3 28 
IT3 O29 O5  O 0 1 N N N N N N 9.807  22.445 28.463 -0.416 0.083  -1.812 O29 IT3 29 
IT3 SG  S1  S 0 1 N Y N N N N 9.820  17.414 27.207 -3.441 2.363  -0.436 SG  IT3 30 
IT3 H1  H1  H 0 1 N N N N N N 14.368 23.361 27.472 -1.705 1.101  1.487  H1  IT3 31 
IT3 H2  H2  H 0 1 N N N N N N 8.988  28.231 25.393 6.469  0.383  -1.336 H2  IT3 32 
IT3 H3  H3  H 0 1 N N N N N N 15.820 21.794 26.221 -1.453 0.144  3.743  H3  IT3 33 
IT3 H4  H4  H 0 1 N N N N N N 14.787 20.430 26.768 -0.382 -0.699 2.599  H4  IT3 34 
IT3 H5  H5  H 0 1 N N N N N N 14.097 21.716 25.720 0.289  0.509  3.721  H5  IT3 35 
IT3 H6  H6  H 0 1 N N N N N N 15.223 22.788 29.756 -1.197 3.464  2.045  H6  IT3 36 
IT3 H7  H7  H 0 1 N N N N N N 15.670 21.155 29.154 -1.886 2.610  3.447  H7  IT3 37 
IT3 H8  H8  H 0 1 N N N N N N 16.466 22.613 28.471 -0.136 2.923  3.367  H8  IT3 38 
IT3 H9  H9  H 0 1 N N N N N N 9.407  29.052 23.008 6.863  -2.689 -0.839 H9  IT3 39 
IT3 H10 H10 H 0 1 N N N N N N 9.834  27.392 22.471 7.695  -1.686 -2.144 H10 IT3 40 
IT3 H11 H11 H 0 1 N N N N N N 11.963 29.940 24.028 8.855  1.079  -0.248 H11 IT3 41 
IT3 H12 H12 H 0 1 N N N N N N 12.318 28.628 26.759 10.118 -0.293 1.387  H12 IT3 42 
IT3 H13 H13 H 0 1 N N N N N N 13.979 30.356 27.321 11.287 1.504  0.140  H13 IT3 43 
IT3 H14 H14 H 0 1 N N N N N N 13.587 31.245 25.810 12.384 0.145  0.481  H14 IT3 44 
IT3 H15 H15 H 0 1 N N N N N N 12.350 31.080 27.101 11.695 0.345  -1.148 H15 IT3 45 
IT3 H16 H16 H 0 1 N N N N N N 10.601 19.904 26.816 -2.022 -0.259 0.801  H16 IT3 46 
IT3 H17 H17 H 0 1 N N N N N N 9.771  18.583 29.265 -2.352 1.376  -2.343 H17 IT3 47 
IT3 H18 H18 H 0 1 N N N N N N 8.313  20.515 28.624 -2.768 -0.988 -1.863 H18 IT3 48 
IT3 H19 H19 H 0 1 N N N N N N 6.839  19.273 27.057 -4.412 -0.008 0.512  H19 IT3 49 
IT3 H20 H20 H 0 1 N N N N N N 8.199  19.131 25.893 -5.112 -0.626 -1.004 H20 IT3 50 
IT3 H21 H21 H 0 1 N N N N N N 8.260  21.672 25.786 -3.207 -2.189 0.813  H21 IT3 51 
IT3 H22 H22 H 0 1 N N N N N N 5.828  23.696 26.095 -5.299 -4.813 -1.272 H22 IT3 52 
IT3 H23 H23 H 0 1 N N N N N N 4.523  22.705 26.830 -4.053 -5.027 -0.008 H23 IT3 53 
IT3 H24 H24 H 0 1 N N N N N N 6.033  21.182 27.774 -4.475 -2.694 -1.898 H24 IT3 54 
IT3 H25 H25 H 0 1 N N N N N N 7.172  22.565 27.650 -2.945 -3.346 -1.224 H25 IT3 55 
IT3 H26 H26 H 0 1 N N N N N N 12.105 21.716 26.300 0.530  -0.704 1.033  H26 IT3 56 
IT3 H27 H27 H 0 1 N N N N N N 12.770 22.506 29.187 0.254  2.276  0.451  H27 IT3 57 
IT3 H28 H28 H 0 1 N N N N N N 12.953 20.861 28.489 1.294  1.608  1.732  H28 IT3 58 
IT3 H29 H29 H 0 1 N N N N N N 8.436  25.846 25.513 5.157  -1.744 0.426  H29 IT3 59 
IT3 H30 H30 H 0 1 N N N N N N 9.501  25.455 24.120 5.412  -0.143 1.161  H30 IT3 60 
IT3 H31 H31 H 0 1 N N N N N N 11.716 27.256 24.164 7.896  -1.218 0.952  H31 IT3 61 
IT3 H32 H32 H 0 1 N N N N N N 4.580  22.057 24.383 -6.445 -4.278 0.880  H32 IT3 62 
IT3 H33 H33 H 0 1 N N N N N N 12.385 24.337 27.361 1.818  0.493  -1.309 H33 IT3 63 
IT3 H34 H34 H 0 1 N N N N N N 7.457  18.529 29.592 -5.193 0.841  -2.078 H34 IT3 64 
IT3 O2  O6  O 0 1 N Y N N N N ?      ?      ?      -3.780 3.640  -1.192 O2  IT3 65 
IT3 O1  O7  O 0 1 N Y N N N N 9.747  15.781 27.975 -4.609 2.087  0.326  O1  IT3 66 
IT3 O3  O8  O 0 1 N Y N N N N ?      ?      ?      -2.203 2.651  0.200  O3  IT3 67 
IT3 H36 H36 H 0 1 N N N N N N 10.728 29.928 25.332 9.263  -0.080 -1.535 H36 IT3 68 
IT3 H37 H37 H 0 1 N N N N N N 13.556 28.792 25.468 10.526 -1.452 0.100  H37 IT3 69 
IT3 H35 H35 H 0 1 N Y N N N N ?      ?      ?      -3.930 4.407  -0.622 H35 IT3 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IT3 C24 C23 SING N N 1  
IT3 C24 C22 SING N N 2  
IT3 O10 C06 DOUB N N 3  
IT3 C23 C22 SING N N 4  
IT3 C23 C25 SING N N 5  
IT3 C22 C21 SING N N 6  
IT3 C25 C26 SING N N 7  
IT3 C06 N07 SING N N 8  
IT3 C06 C05 SING N N 9  
IT3 N07 C08 SING N N 10 
IT3 C21 O20 SING N N 11 
IT3 O28 C19 DOUB N N 12 
IT3 C26 C27 SING N N 13 
IT3 O20 C19 SING N N 14 
IT3 C19 N18 SING N N 15 
IT3 C05 C04 SING N N 16 
IT3 C05 C09 SING N N 17 
IT3 C08 C09 SING N N 18 
IT3 C16 C15 SING N N 19 
IT3 C04 C03 SING N N 20 
IT3 N18 C13 SING N N 21 
IT3 SG  C01 SING N N 22 
IT3 C13 C12 SING N N 23 
IT3 C13 C14 SING N N 24 
IT3 N11 C12 SING N N 25 
IT3 N11 C03 SING N N 26 
IT3 C12 O29 DOUB N N 27 
IT3 C15 C14 SING N N 28 
IT3 C15 C17 SING N N 29 
IT3 C03 C01 SING N N 30 
IT3 C01 O02 SING N N 31 
IT3 C15 H1  SING N N 32 
IT3 C22 H2  SING N N 33 
IT3 C16 H3  SING N N 34 
IT3 C16 H4  SING N N 35 
IT3 C16 H5  SING N N 36 
IT3 C17 H6  SING N N 37 
IT3 C17 H7  SING N N 38 
IT3 C17 H8  SING N N 39 
IT3 C24 H9  SING N N 40 
IT3 C24 H10 SING N N 41 
IT3 C25 H11 SING N N 42 
IT3 C26 H12 SING N N 43 
IT3 C27 H13 SING N N 44 
IT3 C27 H14 SING N N 45 
IT3 C27 H15 SING N N 46 
IT3 N11 H16 SING N N 47 
IT3 C01 H17 SING N N 48 
IT3 C03 H18 SING N N 49 
IT3 C04 H19 SING N N 50 
IT3 C04 H20 SING N N 51 
IT3 C05 H21 SING N N 52 
IT3 C08 H22 SING N N 53 
IT3 C08 H23 SING N N 54 
IT3 C09 H24 SING N N 55 
IT3 C09 H25 SING N N 56 
IT3 C13 H26 SING N N 57 
IT3 C14 H27 SING N N 58 
IT3 C14 H28 SING N N 59 
IT3 C21 H29 SING N N 60 
IT3 C21 H30 SING N N 61 
IT3 C23 H31 SING N N 62 
IT3 N07 H32 SING N N 63 
IT3 N18 H33 SING N N 64 
IT3 O02 H34 SING N N 65 
IT3 SG  O2  SING N N 66 
IT3 SG  O1  DOUB N N 67 
IT3 SG  O3  DOUB N N 68 
IT3 C25 H36 SING N N 69 
IT3 C26 H37 SING N N 70 
IT3 O2  H35 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IT3 SMILES           ACDLabs              12.01 "CC(C)CC(NC(=O)OCC1CC1CCC)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O"                                                                                                                                                              
IT3 InChI            InChI                1.03  "InChI=1S/C21H37N3O8S/c1-4-5-13-9-15(13)11-32-21(28)24-16(8-12(2)3)19(26)23-17(20(27)33(29,30)31)10-14-6-7-22-18(14)25/h12-17,20,27H,4-11H2,1-3H3,(H,22,25)(H,23,26)(H,24,28)(H,29,30,31)/t13-,14+,15+,16+,17+,20+/m1/s1" 
IT3 InChIKey         InChI                1.03  ZYXQADHLOGEXOL-VRCAPQLRSA-N                                                                                                                                                                                               
IT3 SMILES_CANONICAL CACTVS               3.385 "CCC[C@@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)[S](O)(=O)=O"                                                                                                                               
IT3 SMILES           CACTVS               3.385 "CCC[CH]1C[CH]1COC(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O"                                                                                                                                          
IT3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC[C@@H]1C[C@H]1COC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@@H](O)S(=O)(=O)O"                                                                                                                                 
IT3 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCC1CC1COC(=O)NC(CC(C)C)C(=O)NC(CC2CCNC2=O)C(O)S(=O)(=O)O"                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
IT3 "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-2-{[N-({[(1R,2R)-2-propylcyclopropyl]methoxy}carbonyl)-L-leucyl]amino}propane-1-sulfonic acid"                                               
IT3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-4-methyl-2-[[(1~{R},2~{R})-2-propylcyclopropyl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IT3 "Create component"   2022-01-27 RCSB 
IT3 "Modify coordinates" 2022-01-27 RCSB 
IT3 "Initial release"    2022-02-09 RCSB 
IT3 "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            IT3 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C01 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
