data_J63
# 
_chem_comp.id                                    J63 
_chem_comp.name                                  "1-[(benzyloxy)methyl]-6-(cyclohexylmethyl)-3-hydroxy-5-(propan-2-yl)pyrimidine-2,4(1H,3H)-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H30 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-11-07 
_chem_comp.pdbx_modified_date                    2017-06-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        386.485 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     J63 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5TUQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
J63 O01  O1  O 0 1 N N N 53.887 -27.094 33.361 1.913  -3.503 -0.687 O01  J63 1  
J63 C02  C1  C 0 1 N N N 52.900 -27.628 33.736 1.337  -2.567 -0.162 C02  J63 2  
J63 C03  C2  C 0 1 N N N 52.464 -27.496 35.164 1.469  -1.260 -0.691 C03  J63 3  
J63 C04  C3  C 0 1 N N N 53.427 -26.624 36.026 2.322  -1.011 -1.909 C04  J63 4  
J63 C05  C4  C 0 1 N N N 53.660 -25.250 35.407 3.722  -1.583 -1.676 C05  J63 5  
J63 C06  C5  C 0 1 N N N 53.121 -26.470 37.520 1.688  -1.692 -3.123 C06  J63 6  
J63 C07  C6  C 0 1 N N N 51.170 -28.200 35.609 0.820  -0.240 -0.090 C07  J63 7  
J63 C08  C7  C 0 1 N N N 50.550 -28.188 37.048 0.943  1.160  -0.633 C08  J63 8  
J63 C09  C8  C 0 1 N N N 49.312 -27.228 37.160 1.991  1.930  0.173  C09  J63 9  
J63 C10  C9  C 0 1 N N N 48.525 -27.705 38.388 3.369  1.304  -0.051 C10  J63 10 
J63 C11  C10 C 0 1 N N N 47.268 -26.874 38.651 4.416  2.074  0.756  C11  J63 11 
J63 C12  C11 C 0 1 N N N 47.584 -25.378 38.693 4.439  3.534  0.300  C12  J63 12 
J63 C13  C12 C 0 1 N N N 48.403 -24.904 37.484 3.061  4.160  0.524  C13  J63 13 
J63 C14  C13 C 0 1 N N N 49.675 -25.742 37.308 2.013  3.391  -0.282 C14  J63 14 
J63 N15  N1  N 0 1 N N N 50.422 -28.978 34.615 0.050  -0.484 1.014  N15  J63 15 
J63 C16  C14 C 0 1 N N N 49.172 -29.707 34.975 -0.655 0.623  1.666  C16  J63 16 
J63 O17  O2  O 0 1 N N N 49.614 -31.021 35.317 -1.813 0.966  0.903  O17  J63 17 
J63 C18  C15 C 0 1 N N N 49.448 -31.972 34.276 -2.913 0.072  1.083  C18  J63 18 
J63 C19  C16 C 0 1 Y N N 50.526 -33.084 34.402 -4.032 0.458  0.151  C19  J63 19 
J63 C20  C17 C 0 1 Y N N 51.584 -33.134 33.521 -4.993 1.363  0.562  C20  J63 20 
J63 C21  C18 C 0 1 Y N N 52.538 -34.146 33.640 -6.020 1.718  -0.293 C21  J63 21 
J63 C22  C19 C 0 1 Y N N 52.429 -35.088 34.643 -6.086 1.168  -1.559 C22  J63 22 
J63 C23  C20 C 0 1 Y N N 51.371 -35.033 35.526 -5.124 0.263  -1.971 C23  J63 23 
J63 C24  C21 C 0 1 Y N N 50.420 -34.029 35.400 -4.095 -0.088 -1.117 C24  J63 24 
J63 C25  C22 C 0 1 N N N 50.890 -29.091 33.212 -0.067 -1.730 1.507  C25  J63 25 
J63 N26  N2  N 0 1 N N N 52.129 -28.414 32.767 0.564  -2.766 0.924  N26  J63 26 
J63 O27  O3  O 0 1 N N N 52.542 -28.536 31.420 0.426  -4.069 1.462  O27  J63 27 
J63 O28  O4  O 0 1 N N N 50.276 -29.714 32.438 -0.756 -1.924 2.490  O28  J63 28 
J63 H041 H1  H 0 0 N N N 54.399 -27.136 35.978 2.392  0.061  -2.090 H041 J63 29 
J63 H051 H2  H 0 0 N N N 54.343 -24.671 36.046 3.663  -2.669 -1.603 H051 J63 30 
J63 H052 H3  H 0 0 N N N 54.105 -25.369 34.408 4.368  -1.310 -2.510 H052 J63 31 
J63 H053 H4  H 0 0 N N N 52.700 -24.719 35.320 4.131  -1.177 -0.751 H053 J63 32 
J63 H061 H5  H 0 0 N N N 53.885 -25.831 37.987 0.690  -1.285 -3.289 H061 J63 33 
J63 H063 H6  H 0 0 N N N 52.130 -26.009 37.646 2.304  -1.512 -4.004 H063 J63 34 
J63 H062 H7  H 0 0 N N N 53.128 -27.460 37.999 1.617  -2.765 -2.942 H062 J63 35 
J63 H082 H8  H 0 0 N N N 50.229 -29.209 37.303 1.248  1.119  -1.679 H082 J63 36 
J63 H081 H9  H 0 0 N N N 51.319 -27.857 37.761 -0.019 1.666  -0.555 H081 J63 37 
J63 H091 H10 H 0 0 N N N 48.688 -27.356 36.263 1.739  1.884  1.233  H091 J63 38 
J63 H101 H11 H 0 0 N N N 48.226 -28.752 38.228 3.352  0.264  0.273  H101 J63 39 
J63 H102 H12 H 0 0 N N N 49.179 -27.641 39.270 3.620  1.350  -1.111 H102 J63 40 
J63 H112 H13 H 0 0 N N N 46.540 -27.063 37.848 4.165  2.028  1.815  H112 J63 41 
J63 H111 H14 H 0 0 N N N 46.836 -27.175 39.617 5.398  1.628  0.595  H111 J63 42 
J63 H122 H15 H 0 0 N N N 48.156 -25.166 39.609 5.185  4.083  0.874  H122 J63 43 
J63 H121 H16 H 0 0 N N N 46.636 -24.820 38.715 4.690  3.580  -0.760 H121 J63 44 
J63 H131 H17 H 0 0 N N N 48.685 -23.851 37.633 2.809  4.114  1.584  H131 J63 45 
J63 H132 H18 H 0 0 N N N 47.787 -24.993 36.577 3.077  5.201  0.200  H132 J63 46 
J63 H142 H19 H 0 0 N N N 50.322 -25.611 38.188 2.265  3.437  -1.342 H142 J63 47 
J63 H141 H20 H 0 0 N N N 50.210 -25.407 36.407 1.032  3.836  -0.122 H141 J63 48 
J63 H162 H21 H 0 0 N N N 48.675 -29.228 35.832 -0.956 0.321  2.669  H162 J63 49 
J63 H161 H22 H 0 0 N N N 48.480 -29.739 34.120 0.007  1.487  1.730  H161 J63 50 
J63 H181 H23 H 0 0 N N N 49.553 -31.470 33.303 -2.593 -0.947 0.864  H181 J63 51 
J63 H182 H24 H 0 0 N N N 48.448 -32.423 34.350 -3.263 0.129  2.114  H182 J63 52 
J63 H201 H25 H 0 0 N N N 51.675 -32.393 32.741 -4.942 1.793  1.551  H201 J63 53 
J63 H211 H26 H 0 0 N N N 53.364 -34.192 32.945 -6.771 2.424  0.029  H211 J63 54 
J63 H221 H27 H 0 0 N N N 53.171 -35.867 34.736 -6.888 1.444  -2.227 H221 J63 55 
J63 H231 H28 H 0 0 N N N 51.282 -35.768 36.312 -5.176 -0.167 -2.960 H231 J63 56 
J63 H241 H29 H 0 0 N N N 49.590 -33.988 36.090 -3.342 -0.792 -1.440 H241 J63 57 
J63 H271 H30 H 0 0 N N N 51.921 -29.077 30.946 -0.140 -4.113 2.244  H271 J63 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
J63 O27 N26  SING N N 1  
J63 O28 C25  DOUB N N 2  
J63 N26 C25  SING N N 3  
J63 N26 C02  SING N N 4  
J63 C25 N15  SING N N 5  
J63 O01 C02  DOUB N N 6  
J63 C20 C21  DOUB Y N 7  
J63 C20 C19  SING Y N 8  
J63 C21 C22  SING Y N 9  
J63 C02 C03  SING N N 10 
J63 C18 C19  SING N N 11 
J63 C18 O17  SING N N 12 
J63 C19 C24  DOUB Y N 13 
J63 N15 C16  SING N N 14 
J63 N15 C07  SING N N 15 
J63 C22 C23  DOUB Y N 16 
J63 C16 O17  SING N N 17 
J63 C03 C07  DOUB N N 18 
J63 C03 C04  SING N N 19 
J63 C24 C23  SING Y N 20 
J63 C05 C04  SING N N 21 
J63 C07 C08  SING N N 22 
J63 C04 C06  SING N N 23 
J63 C08 C09  SING N N 24 
J63 C09 C14  SING N N 25 
J63 C09 C10  SING N N 26 
J63 C14 C13  SING N N 27 
J63 C13 C12  SING N N 28 
J63 C10 C11  SING N N 29 
J63 C11 C12  SING N N 30 
J63 C04 H041 SING N N 31 
J63 C05 H051 SING N N 32 
J63 C05 H052 SING N N 33 
J63 C05 H053 SING N N 34 
J63 C06 H061 SING N N 35 
J63 C06 H063 SING N N 36 
J63 C06 H062 SING N N 37 
J63 C08 H082 SING N N 38 
J63 C08 H081 SING N N 39 
J63 C09 H091 SING N N 40 
J63 C10 H101 SING N N 41 
J63 C10 H102 SING N N 42 
J63 C11 H112 SING N N 43 
J63 C11 H111 SING N N 44 
J63 C12 H122 SING N N 45 
J63 C12 H121 SING N N 46 
J63 C13 H131 SING N N 47 
J63 C13 H132 SING N N 48 
J63 C14 H142 SING N N 49 
J63 C14 H141 SING N N 50 
J63 C16 H162 SING N N 51 
J63 C16 H161 SING N N 52 
J63 C18 H181 SING N N 53 
J63 C18 H182 SING N N 54 
J63 C20 H201 SING N N 55 
J63 C21 H211 SING N N 56 
J63 C22 H221 SING N N 57 
J63 C23 H231 SING N N 58 
J63 C24 H241 SING N N 59 
J63 O27 H271 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
J63 SMILES           ACDLabs              12.01 "O=C3C(=C(CC1CCCCC1)N(COCc2ccccc2)C(N3O)=O)C(C)C"                                                                                                          
J63 InChI            InChI                1.03  "InChI=1S/C22H30N2O4/c1-16(2)20-19(13-17-9-5-3-6-10-17)23(22(26)24(27)21(20)25)15-28-14-18-11-7-4-8-12-18/h4,7-8,11-12,16-17,27H,3,5-6,9-10,13-15H2,1-2H3" 
J63 InChIKey         InChI                1.03  ROZLWEMOPMWULZ-UHFFFAOYSA-N                                                                                                                                
J63 SMILES_CANONICAL CACTVS               3.385 "CC(C)C1=C(CC2CCCCC2)N(COCc3ccccc3)C(=O)N(O)C1=O"                                                                                                          
J63 SMILES           CACTVS               3.385 "CC(C)C1=C(CC2CCCCC2)N(COCc3ccccc3)C(=O)N(O)C1=O"                                                                                                          
J63 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)C1=C(N(C(=O)N(C1=O)O)COCc2ccccc2)CC3CCCCC3"                                                                                                          
J63 SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)C1=C(N(C(=O)N(C1=O)O)COCc2ccccc2)CC3CCCCC3"                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
J63 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(benzyloxy)methyl]-6-(cyclohexylmethyl)-3-hydroxy-5-(propan-2-yl)pyrimidine-2,4(1H,3H)-dione" 
J63 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-(cyclohexylmethyl)-3-oxidanyl-1-(phenylmethoxymethyl)-5-propan-2-yl-pyrimidine-2,4-dione"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
J63 "Create component" 2016-11-07 RCSB 
J63 "Initial release"  2017-06-28 RCSB 
# 
