data_KV3
# 
_chem_comp.id                                    KV3 
_chem_comp.name                                  "(1~{S},3~{R})-3-[(10~{S})-13-chloranyl-2-(2,2-dimethylpropyl)-10-(2-methoxyphenyl)-3,5-bis(oxidanylidene)-9-oxa-2,6-diazabicyclo[9.4.0]pentadeca-1(15),11,13-trien-6-yl]cyclohexane-1-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H39 Cl N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-17 
_chem_comp.pdbx_modified_date                    2024-05-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        571.104 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KV3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8H1V 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KV3 C2  C1  C  0 1 N N N N N N 19.998 -6.725 55.261 1.477  -3.234 1.939  C2  KV3 1  
KV3 C3  C2  C  0 1 N N N N N N 17.463 -6.966 55.441 3.598  -4.107 0.948  C3  KV3 2  
KV3 C6  C3  C  0 1 N N N N N N 15.408 -2.943 56.839 -0.856 -2.227 -1.265 C6  KV3 3  
KV3 C7  C4  C  0 1 N N N N N N 15.378 -2.442 58.291 -1.160 -2.296 0.211  C7  KV3 4  
KV3 C9  C5  C  0 1 Y N N N N N 15.788 -3.595 53.646 3.671  -0.882 -1.835 C9  KV3 5  
KV3 C10 C6  C  0 1 Y N N N N N 15.281 -2.763 52.623 4.691  0.047  -1.873 C10 KV3 6  
KV3 C20 C7  C  0 1 Y N N N N N 20.065 2.026  54.614 -0.279 3.151  -1.430 C20 KV3 7  
KV3 C21 C8  C  0 1 Y N N N N N 21.187 1.578  53.876 -1.010 3.894  -0.522 C21 KV3 8  
KV3 C25 C9  C  0 1 N N N N N N 16.221 -2.679 61.429 -3.834 -0.890 -0.344 C25 KV3 9  
KV3 C26 C10 C  0 1 N N S N N N 15.899 -2.125 62.852 -4.725 0.143  -1.037 C26 KV3 10 
KV3 C27 C11 C  0 1 N N N N N N 16.733 -0.917 63.298 -5.097 1.244  -0.042 C27 KV3 11 
KV3 C28 C12 C  0 1 N N N N N N 16.459 0.232  62.325 -3.825 1.926  0.464  C28 KV3 12 
KV3 C29 C13 C  0 1 N N N N N N 16.752 -0.227 60.866 -2.934 0.892  1.157  C29 KV3 13 
KV3 C30 C14 C  0 1 N N N N N N 16.033 -3.222 63.897 -5.979 -0.529 -1.535 C30 KV3 14 
KV3 O   O1  O  0 1 N N N N N N 16.766 -4.753 57.644 0.196  -0.236 -1.968 O   KV3 15 
KV3 C5  C15 C  0 1 N N N N N N 16.511 -4.015 56.700 0.342  -1.316 -1.424 C5  KV3 16 
KV3 N   N1  N  0 1 N N N N N N 17.241 -4.041 55.542 1.569  -1.705 -0.988 N   KV3 17 
KV3 C4  C16 C  0 1 N N N N N N 18.589 -4.709 55.526 1.864  -3.074 -0.525 C4  KV3 18 
KV3 C1  C17 C  0 1 N N N N N N 18.622 -6.129 54.894 2.531  -3.015 0.851  C1  KV3 19 
KV3 C   C18 C  0 1 N N N N N N 18.479 -6.090 53.360 3.184  -1.644 1.042  C   KV3 20 
KV3 C8  C19 C  0 1 Y N N N N N 16.778 -3.140 54.558 2.582  -0.717 -1.000 C8  KV3 21 
KV3 C11 C20 C  0 1 Y N N N N N 15.753 -1.458 52.561 4.630  1.159  -1.052 C11 KV3 22 
KV3 CL  CL1 CL 0 0 N N N N N N 15.140 -0.384 51.348 5.903  2.336  -1.090 CL  KV3 23 
KV3 C12 C21 C  0 1 Y N N N N N 16.763 -1.012 53.433 3.553  1.326  -0.204 C12 KV3 24 
KV3 C13 C22 C  0 1 Y N N N N N 17.289 -1.857 54.437 2.526  0.390  -0.163 C13 KV3 25 
KV3 C14 C23 C  0 1 N N S N N N 18.330 -1.330 55.419 1.417  0.639  0.825  C14 KV3 26 
KV3 C18 C24 C  0 1 Y N N N N N 19.299 -0.287 54.854 0.562  1.788  0.350  C18 KV3 27 
KV3 C23 C25 C  0 1 Y N N N N N 20.381 -0.753 54.098 -0.175 2.529  1.263  C23 KV3 28 
KV3 O2  O2  O  0 1 N N N N N N 20.401 -2.135 53.930 -0.119 2.226  2.587  O2  KV3 29 
KV3 C24 C26 C  0 1 N N N N N N 21.358 -2.719 53.055 -0.904 3.031  3.469  C24 KV3 30 
KV3 C22 C27 C  0 1 Y N N N N N 21.314 0.173  53.590 -0.960 3.585  0.824  C22 KV3 31 
KV3 C19 C28 C  0 1 Y N N N N N 19.138 1.087  55.122 0.505  2.098  -0.995 C19 KV3 32 
KV3 O1  O3  O  0 1 N N N N N N 17.544 -0.741 56.440 0.621  -0.522 1.029  O1  KV3 33 
KV3 C15 C29 C  0 1 N N N N N N 17.981 -0.598 57.780 0.103  -0.685 2.352  C15 KV3 34 
KV3 C16 C30 C  0 1 N N N N N N 17.790 -1.860 58.583 -1.365 -1.128 2.277  C16 KV3 35 
KV3 N17 N2  N  0 1 N N N N N N 16.411 -2.013 59.030 -1.707 -1.199 0.826  N17 KV3 36 
KV3 O5  O4  O  0 1 N N N N N N 14.281 -2.486 58.870 -0.939 -3.313 0.847  O5  KV3 37 
KV3 C17 C31 C  0 1 N N R N N N 16.065 -1.536 60.404 -2.561 -0.209 0.162  C17 KV3 38 
KV3 O4  O5  O  0 1 N N N N N N 16.941 -2.943 64.845 -6.913 0.188  -2.180 O4  KV3 39 
KV3 O3  O6  O  0 1 N N N N N N 15.376 -4.228 63.879 -6.143 -1.712 -1.355 O3  KV3 40 
KV3 H1  H1  H  0 1 N N N N N N 20.105 -6.755 56.355 1.889  -2.947 2.906  H1  KV3 41 
KV3 H2  H2  H  0 1 N N N N N N 20.075 -7.745 54.857 0.600  -2.624 1.722  H2  KV3 42 
KV3 H3  H3  H  0 1 N N N N N N 20.795 -6.100 54.832 1.192  -4.285 1.962  H3  KV3 43 
KV3 H4  H4  H  0 1 N N N N N N 17.532 -7.016 56.538 3.133  -5.083 0.811  H4  KV3 44 
KV3 H5  H5  H  0 1 N N N N N N 16.508 -6.501 55.155 4.349  -3.951 0.173  H5  KV3 45 
KV3 H6  H6  H  0 1 N N N N N N 17.516 -7.982 55.023 4.074  -4.064 1.928  H6  KV3 46 
KV3 H7  H7  H  0 1 N N N N N N 15.623 -2.102 56.163 -0.625 -3.221 -1.650 H7  KV3 47 
KV3 H8  H8  H  0 1 N N N N N N 14.433 -3.381 56.580 -1.704 -1.825 -1.819 H8  KV3 48 
KV3 H9  H9  H  0 1 N N N N N N 15.413 -4.604 53.737 3.727  -1.758 -2.468 H9  KV3 49 
KV3 H10 H10 H  0 1 N N N N N N 14.552 -3.128 51.914 5.531  -0.093 -2.534 H10 KV3 50 
KV3 H11 H11 H  0 1 N N N N N N 19.918 3.082  54.788 -0.323 3.390  -2.483 H11 KV3 51 
KV3 H12 H12 H  0 1 N N N N N N 21.935 2.278  53.534 -1.621 4.715  -0.864 H12 KV3 52 
KV3 H13 H13 H  0 1 N N N N N N 15.524 -3.494 61.183 -4.371 -1.327 0.498  H13 KV3 53 
KV3 H14 H14 H  0 1 N N N N N N 17.253 -3.059 61.405 -3.569 -1.675 -1.053 H14 KV3 54 
KV3 H15 H15 H  0 1 N N N N N N 14.846 -1.808 62.842 -4.188 0.580  -1.878 H15 KV3 55 
KV3 H16 H16 H  0 1 N N N N N N 17.802 -1.174 63.280 -5.732 1.980  -0.535 H16 KV3 56 
KV3 H17 H17 H  0 1 N N N N N N 16.445 -0.620 64.317 -5.635 0.807  0.800  H17 KV3 57 
KV3 H18 H18 H  0 1 N N N N N N 17.107 1.085  62.576 -3.287 2.363  -0.377 H18 KV3 58 
KV3 H19 H19 H  0 1 N N N N N N 15.405 0.536  62.407 -4.090 2.710  1.173  H19 KV3 59 
KV3 H20 H20 H  0 1 N N N N N N 17.839 -0.368 60.772 -2.027 1.378  1.518  H20 KV3 60 
KV3 H21 H21 H  0 1 N N N N N N 16.427 0.578  60.190 -3.471 0.455  1.999  H21 KV3 61 
KV3 H22 H22 H  0 1 N N N N N N 18.939 -4.792 56.566 0.936  -3.641 -0.454 H22 KV3 62 
KV3 H23 H23 H  0 1 N N N N N N 19.279 -4.068 54.957 2.534  -3.561 -1.233 H23 KV3 63 
KV3 H24 H24 H  0 1 N N N N N N 17.500 -5.666 53.093 3.802  -1.658 1.940  H24 KV3 64 
KV3 H25 H25 H  0 1 N N N N N N 19.278 -5.465 52.933 3.807  -1.415 0.177  H25 KV3 65 
KV3 H26 H26 H  0 1 N N N N N N 18.558 -7.111 52.958 2.410  -0.884 1.145  H26 KV3 66 
KV3 H27 H27 H  0 1 N N N N N N 17.143 -0.006 53.334 3.506  2.193  0.442  H27 KV3 67 
KV3 H28 H28 H  0 1 N N N N N N 18.909 -2.177 55.817 1.870  0.927  1.785  H28 KV3 68 
KV3 H29 H29 H  0 1 N N N N N N 21.228 -3.811 53.045 -0.586 4.071  3.393  H29 KV3 69 
KV3 H30 H30 H  0 1 N N N N N N 21.214 -2.324 52.038 -1.956 2.951  3.195  H30 KV3 70 
KV3 H31 H31 H  0 1 N N N N N N 22.372 -2.473 53.404 -0.769 2.684  4.494  H31 KV3 71 
KV3 H32 H32 H  0 1 N N N N N N 22.134 -0.175 52.979 -1.531 4.165  1.533  H32 KV3 72 
KV3 H33 H33 H  0 1 N N N N N N 18.303 1.424  55.718 1.071  1.516  -1.707 H33 KV3 73 
KV3 H34 H34 H  0 1 N N N N N N 19.050 -0.339 57.778 0.686  -1.440 2.879  H34 KV3 74 
KV3 H35 H35 H  0 1 N N N N N N 17.408 0.213  58.254 0.166  0.262  2.889  H35 KV3 75 
KV3 H36 H36 H  0 1 N N N N N N 18.060 -2.724 57.958 -1.484 -2.107 2.739  H36 KV3 76 
KV3 H37 H37 H  0 1 N N N N N N 18.448 -1.825 59.464 -1.999 -0.396 2.776  H37 KV3 77 
KV3 H38 H38 H  0 1 N N N N N N 14.989 -1.308 60.382 -2.024 0.228  -0.679 H38 KV3 78 
KV3 H39 H39 H  0 1 N N N N N N 16.971 -3.654 65.474 -7.700 -0.287 -2.481 H39 KV3 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KV3 CL  C11 SING N N 1  
KV3 C11 C10 DOUB Y N 2  
KV3 C11 C12 SING Y N 3  
KV3 C10 C9  SING Y N 4  
KV3 C24 O2  SING N N 5  
KV3 C   C1  SING N N 6  
KV3 C12 C13 DOUB Y N 7  
KV3 C22 C21 DOUB Y N 8  
KV3 C22 C23 SING Y N 9  
KV3 C9  C8  DOUB Y N 10 
KV3 C21 C20 SING Y N 11 
KV3 O2  C23 SING N N 12 
KV3 C23 C18 DOUB Y N 13 
KV3 C13 C8  SING Y N 14 
KV3 C13 C14 SING N N 15 
KV3 C8  N   SING N N 16 
KV3 C20 C19 DOUB Y N 17 
KV3 C18 C19 SING Y N 18 
KV3 C18 C14 SING N N 19 
KV3 C1  C2  SING N N 20 
KV3 C1  C3  SING N N 21 
KV3 C1  C4  SING N N 22 
KV3 C14 O1  SING N N 23 
KV3 C4  N   SING N N 24 
KV3 N   C5  SING N N 25 
KV3 O1  C15 SING N N 26 
KV3 C5  C6  SING N N 27 
KV3 C5  O   DOUB N N 28 
KV3 C6  C7  SING N N 29 
KV3 C15 C16 SING N N 30 
KV3 C7  O5  DOUB N N 31 
KV3 C7  N17 SING N N 32 
KV3 C16 N17 SING N N 33 
KV3 N17 C17 SING N N 34 
KV3 C17 C29 SING N N 35 
KV3 C17 C25 SING N N 36 
KV3 C29 C28 SING N N 37 
KV3 C25 C26 SING N N 38 
KV3 C28 C27 SING N N 39 
KV3 C26 C27 SING N N 40 
KV3 C26 C30 SING N N 41 
KV3 O3  C30 DOUB N N 42 
KV3 C30 O4  SING N N 43 
KV3 C2  H1  SING N N 44 
KV3 C2  H2  SING N N 45 
KV3 C2  H3  SING N N 46 
KV3 C3  H4  SING N N 47 
KV3 C3  H5  SING N N 48 
KV3 C3  H6  SING N N 49 
KV3 C6  H7  SING N N 50 
KV3 C6  H8  SING N N 51 
KV3 C9  H9  SING N N 52 
KV3 C10 H10 SING N N 53 
KV3 C20 H11 SING N N 54 
KV3 C21 H12 SING N N 55 
KV3 C25 H13 SING N N 56 
KV3 C25 H14 SING N N 57 
KV3 C26 H15 SING N N 58 
KV3 C27 H16 SING N N 59 
KV3 C27 H17 SING N N 60 
KV3 C28 H18 SING N N 61 
KV3 C28 H19 SING N N 62 
KV3 C29 H20 SING N N 63 
KV3 C29 H21 SING N N 64 
KV3 C4  H22 SING N N 65 
KV3 C4  H23 SING N N 66 
KV3 C   H24 SING N N 67 
KV3 C   H25 SING N N 68 
KV3 C   H26 SING N N 69 
KV3 C12 H27 SING N N 70 
KV3 C14 H28 SING N N 71 
KV3 C24 H29 SING N N 72 
KV3 C24 H30 SING N N 73 
KV3 C24 H31 SING N N 74 
KV3 C22 H32 SING N N 75 
KV3 C19 H33 SING N N 76 
KV3 C15 H34 SING N N 77 
KV3 C15 H35 SING N N 78 
KV3 C16 H36 SING N N 79 
KV3 C16 H37 SING N N 80 
KV3 C17 H38 SING N N 81 
KV3 O4  H39 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KV3 InChI            InChI                1.06  "InChI=1S/C31H39ClN2O6/c1-31(2,3)19-34-25-13-12-21(32)17-24(25)29(23-10-5-6-11-26(23)39-4)40-15-14-33(27(35)18-28(34)36)22-9-7-8-20(16-22)30(37)38/h5-6,10-13,17,20,22,29H,7-9,14-16,18-19H2,1-4H3,(H,37,38)/t20-,22+,29+/m0/s1" 
KV3 InChIKey         InChI                1.06  CJHFRTFWDPUFCC-APLXEUBXSA-N                                                                                                                                                                                                      
KV3 SMILES_CANONICAL CACTVS               3.385 "COc1ccccc1[C@H]2OCCN([C@@H]3CCC[C@@H](C3)C(O)=O)C(=O)CC(=O)N(CC(C)(C)C)c4ccc(Cl)cc24"                                                                                                                                           
KV3 SMILES           CACTVS               3.385 "COc1ccccc1[CH]2OCCN([CH]3CCC[CH](C3)C(O)=O)C(=O)CC(=O)N(CC(C)(C)C)c4ccc(Cl)cc24"                                                                                                                                                
KV3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)CN1c2ccc(cc2[C@H](OCCN(C(=O)CC1=O)[C@@H]3CCC[C@@H](C3)C(=O)O)c4ccccc4OC)Cl"                                                                                                                                             
KV3 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)CN1c2ccc(cc2C(OCCN(C(=O)CC1=O)C3CCCC(C3)C(=O)O)c4ccccc4OC)Cl"                                                                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           KV3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{S},3~{R})-3-[(10~{S})-13-chloranyl-2-(2,2-dimethylpropyl)-10-(2-methoxyphenyl)-3,5-bis(oxidanylidene)-9-oxa-2,6-diazabicyclo[9.4.0]pentadeca-1(15),11,13-trien-6-yl]cyclohexane-1-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KV3 "Create component" 2022-10-17 PDBJ 
KV3 "Initial release"  2024-05-22 RCSB 
# 
