data_MK3
#

_chem_comp.id                                   MK3
_chem_comp.name                                 "6-{5-[(2-aminopyrimidin-4-yl)amino]-2-hydroxyphenyl}-N-methylidene-1-benzothiophene-2-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H15 N5 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "6-(5-(2-aminopyrimidin-4-ylamino)-2-hydroxyphenyl)-N-methylbenzo[b]thiophene-2-carboxamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-10-21
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       389.430
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MK3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3KA0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MK3  C1    C1    C  0  1  Y  N  N  229.818  81.396  183.615   3.805  -2.553   0.639  C1    MK3   1  
MK3  N1    N1    N  0  1  Y  N  N  231.088  81.812  183.645   3.806  -1.246   0.425  N1    MK3   2  
MK3  O1    O1    O  0  1  N  N  N  235.810  85.539  181.348   0.234   3.657   0.389  O1    MK3   3  
MK3  S1    S1    S  0  1  Y  N  N  241.142  84.138  181.512  -3.748   0.415   1.061  S1    MK3   4  
MK3  C2    C2    C  0  1  Y  N  N  230.388  79.286  184.164   5.980  -2.762  -0.098  C2    MK3   5  
MK3  N2    N2    N  0  1  Y  N  N  229.418  80.150  183.863   4.869  -3.300   0.384  N2    MK3   6  
MK3  O2    O2    O  0  1  N  N  N  243.924  83.518  179.633  -6.464  -1.561  -1.040  O2    MK3   7  
MK3  C3    C3    C  0  1  Y  N  N  231.720  79.619  184.219   6.024  -1.402  -0.336  C3    MK3   8  
MK3  N3    N3    N  0  1  N  N  N  228.848  82.339  183.297   2.666  -3.152   1.148  N3    MK3   9  
MK3  C4    C4    C  0  1  Y  N  N  232.044  80.926  183.944   4.887  -0.640  -0.057  C4    MK3  10  
MK3  N4    N4    N  0  1  N  N  N  233.406  81.285  183.992   4.885   0.728  -0.281  N4    MK3  11  
MK3  C5    C5    C  0  1  Y  N  N  233.965  82.399  183.319   3.705   1.464  -0.113  C5    MK3  12  
MK3  N5    N5    N  0  1  N  N  N  244.159  82.111  181.429  -6.703  -0.680   0.987  N5    MK3  13  
MK3  C6    C6    C  0  1  Y  N  N  235.274  82.307  182.895   2.481   0.881  -0.399  C6    MK3  14  
MK3  C7    C7    C  0  1  Y  N  N  235.958  83.304  182.229   1.308   1.615  -0.232  C7    MK3  15  
MK3  C8    C8    C  0  1  Y  N  N  235.248  84.470  182.000   1.375   2.935   0.224  C8    MK3  16  
MK3  C9    C9    C  0  1  Y  N  N  233.942  84.609  182.419   2.604   3.507   0.507  C9    MK3  17  
MK3  C10   C10   C  0  1  Y  N  N  233.297  83.579  183.070   3.764   2.775   0.345  C10   MK3  18  
MK3  C11   C11   C  0  1  Y  N  N  237.315  82.994  181.814  -0.005   0.998  -0.536  C11   MK3  19  
MK3  C12   C12   C  0  1  Y  N  N  237.499  81.742  181.268  -0.206   0.343  -1.758  C12   MK3  20  
MK3  C13   C13   C  0  1  Y  N  N  238.689  81.222  180.816  -1.403  -0.224  -2.047  C13   MK3  21  
MK3  C14   C14   C  0  1  Y  N  N  238.407  83.824  181.934  -1.036   1.068   0.389  C14   MK3  22  
MK3  C15   C15   C  0  1  Y  N  N  239.621  83.323  181.485  -2.273   0.489   0.104  C15   MK3  23  
MK3  C16   C16   C  0  1  Y  N  N  239.786  82.050  180.933  -2.474  -0.166  -1.120  C16   MK3  24  
MK3  C17   C17   C  0  1  Y  N  N  241.129  81.780  180.555  -3.769  -0.689  -1.243  C17   MK3  25  
MK3  C18   C18   C  0  1  Y  N  N  242.001  82.819  180.804  -4.579  -0.482  -0.197  C18   MK3  26  
MK3  C19   C19   C  0  1  N  N  N  243.422  82.876  180.546  -5.972  -0.942  -0.114  C19   MK3  27  
MK3  C20   C20   C  0  1  N  N  N  244.371  82.519  182.804  -7.932  -1.087   1.060  C20   MK3  28  
MK3  HO1   HO1   H  0  1  N  N  N  235.174  86.242  181.286  -0.155   3.580   1.271  HO1   MK3  29  
MK3  H2    H2    H  0  1  N  N  N  230.110  78.264  184.377   6.842  -3.379  -0.302  H2    MK3  30  
MK3  H3    H3    H  0  1  N  N  N  232.476  78.889  184.466   6.917  -0.938  -0.728  H3    MK3  31  
MK3  HN3   HN3   H  0  1  N  N  N  229.284  83.224  183.134   1.882  -2.615   1.343  HN3   MK3  32  
MK3  HN3A  HN3A  H  0  0  N  N  N  228.360  82.050  182.473   2.652  -4.108   1.309  HN3A  MK3  33  
MK3  HN4   HN4   H  0  1  N  N  N  234.019  80.715  184.538   5.701   1.176  -0.554  HN4   MK3  34  
MK3  H6    H6    H  0  1  N  N  N  235.803  81.388  183.099   2.435  -0.139  -0.751  H6    MK3  35  
MK3  H9    H9    H  0  1  N  N  N  233.418  85.535  182.235   2.656   4.527   0.859  H9    MK3  36  
MK3  H10   H10   H  0  1  N  N  N  232.270  83.696  183.384   4.720   3.225   0.566  H10   MK3  37  
MK3  H12   H12   H  0  1  N  N  N  236.627  81.110  181.188   0.599   0.291  -2.476  H12   MK3  38  
MK3  H13   H13   H  0  1  N  N  N  238.760  80.229  180.396  -1.543  -0.725  -2.994  H13   MK3  39  
MK3  H14   H14   H  0  1  N  N  N  238.323  84.815  182.356  -0.881   1.573   1.331  H14   MK3  40  
MK3  H17   H17   H  0  1  N  N  N  241.439  80.845  180.112  -4.092  -1.225  -2.124  H17   MK3  41  
MK3  H20   H20   H  0  1  N  N  N  243.947  83.445  183.164  -8.369  -1.635   0.239  H20   MK3  42  
MK3  H20A  H20A  H  0  0  N  N  N  244.953  81.897  183.468  -8.518  -0.877   1.942  H20A  MK3  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MK3  N3   C1    SING  N  N   1  
MK3  C1   N1    DOUB  Y  N   2  
MK3  C1   N2    SING  Y  N   3  
MK3  N1   C4    SING  Y  N   4  
MK3  O1   C8    SING  N  N   5  
MK3  O1   HO1   SING  N  N   6  
MK3  C18  S1    SING  Y  N   7  
MK3  C15  S1    SING  Y  N   8  
MK3  N2   C2    DOUB  Y  N   9  
MK3  C2   C3    SING  Y  N  10  
MK3  C2   H2    SING  N  N  11  
MK3  O2   C19   DOUB  N  N  12  
MK3  C4   C3    DOUB  Y  N  13  
MK3  C3   H3    SING  N  N  14  
MK3  N3   HN3   SING  N  N  15  
MK3  N3   HN3A  SING  N  N  16  
MK3  C4   N4    SING  N  N  17  
MK3  C5   N4    SING  N  N  18  
MK3  N4   HN4   SING  N  N  19  
MK3  C6   C5    DOUB  Y  N  20  
MK3  C10  C5    SING  Y  N  21  
MK3  C19  N5    SING  N  N  22  
MK3  N5   C20   DOUB  N  N  23  
MK3  C7   C6    SING  Y  N  24  
MK3  C6   H6    SING  N  N  25  
MK3  C11  C7    SING  Y  N  26  
MK3  C8   C7    DOUB  Y  N  27  
MK3  C8   C9    SING  Y  N  28  
MK3  C9   C10   DOUB  Y  N  29  
MK3  C9   H9    SING  N  N  30  
MK3  C10  H10   SING  N  N  31  
MK3  C12  C11   DOUB  Y  N  32  
MK3  C11  C14   SING  Y  N  33  
MK3  C13  C12   SING  Y  N  34  
MK3  C12  H12   SING  N  N  35  
MK3  C13  C16   DOUB  Y  N  36  
MK3  C13  H13   SING  N  N  37  
MK3  C15  C14   DOUB  Y  N  38  
MK3  C14  H14   SING  N  N  39  
MK3  C16  C15   SING  Y  N  40  
MK3  C17  C16   SING  Y  N  41  
MK3  C17  C18   DOUB  Y  N  42  
MK3  C17  H17   SING  N  N  43  
MK3  C19  C18   SING  N  N  44  
MK3  C20  H20   SING  N  N  45  
MK3  C20  H20A  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MK3  SMILES_CANONICAL  CACTVS                3.352  "Nc1nccc(Nc2ccc(O)c(c2)c3ccc4cc(sc4c3)C(=O)N=C)n1"  
MK3  SMILES            CACTVS                3.352  "Nc1nccc(Nc2ccc(O)c(c2)c3ccc4cc(sc4c3)C(=O)N=C)n1"  
MK3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "C=NC(=O)c1cc2ccc(cc2s1)c3cc(ccc3O)Nc4ccnc(n4)N"  
MK3  SMILES            "OpenEye OEToolkits"  1.7.0  "C=NC(=O)c1cc2ccc(cc2s1)c3cc(ccc3O)Nc4ccnc(n4)N"  
MK3  InChI             InChI                 1.03   "InChI=1S/C20H15N5O2S/c1-22-19(27)17-9-12-3-2-11(8-16(12)28-17)14-10-13(4-5-15(14)26)24-18-6-7-23-20(21)25-18/h2-10,26H,1H2,(H3,21,23,24,25)"  
MK3  InChIKey          InChI                 1.03   KCQAKLMJFBAMFX-UHFFFAOYSA-N  
#
_pdbx_chem_comp_identifier.comp_id          MK3
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.6.1
_pdbx_chem_comp_identifier.identifier       "6-[5-[(2-azanylpyrimidin-4-yl)amino]-2-hydroxy-phenyl]-N-methylidene-1-benzothiophene-2-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MK3  "Create component"      2009-10-21  RCSB  
MK3  "Modify aromatic_flag"  2011-06-04  RCSB  
MK3  "Modify descriptor"     2011-06-04  RCSB  
MK3  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MK3
_pdbx_chem_comp_synonyms.name        "6-(5-(2-aminopyrimidin-4-ylamino)-2-hydroxyphenyl)-N-methylbenzo[b]thiophene-2-carboxamide"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
