data_NW3
# 
_chem_comp.id                                    NW3 
_chem_comp.name                                  "(2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H21 N3 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-11 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        351.421 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NW3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7U4B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NW3 C13 C1  C 0 1 N N S N N N -54.530 14.905 38.387 -3.456 -0.981 -0.804 C13 NW3 1  
NW3 C15 C2  C 0 1 Y N N N N N -55.728 14.217 36.185 -3.820 1.495  -0.850 C15 NW3 2  
NW3 C17 C3  C 0 1 Y N N N N N -57.749 15.302 35.490 -5.170 2.588  0.797  C17 NW3 3  
NW3 C21 C4  C 0 1 N N N N N N -54.796 12.133 32.883 4.776  -0.061 0.839  C21 NW3 4  
NW3 C24 C5  C 0 1 N N N N N N -52.705 13.642 30.917 3.172  2.786  -0.512 C24 NW3 5  
NW3 C01 C6  C 0 1 N N N N N N -54.043 14.770 32.883 4.355  0.818  -1.539 C01 NW3 6  
NW3 C02 C7  C 0 1 N N N N N N -52.938 13.709 32.505 3.240  1.260  -0.589 C02 NW3 7  
NW3 C03 C8  C 0 1 N N S N N N -53.311 12.443 33.064 3.451  0.655  0.812  C03 NW3 8  
NW3 C05 C9  C 0 1 N N S N N N -51.634 13.262 34.832 1.091  0.098  0.583  C05 NW3 9  
NW3 C07 C10 C 0 1 N N S N N N -51.548 14.531 35.761 0.123  -1.086 0.552  C07 NW3 10 
NW3 C08 C11 C 0 1 N N N N N N -50.234 14.614 36.617 0.800  -2.272 -0.084 C08 NW3 11 
NW3 C11 C12 C 0 1 N N N N N N -53.064 14.804 37.897 -2.235 -1.352 -0.002 C11 NW3 12 
NW3 C14 C13 C 0 1 Y N N N N N -55.660 15.026 37.316 -4.064 0.278  -0.241 C14 NW3 13 
NW3 C16 C14 C 0 1 Y N N N N N -56.767 14.369 35.276 -4.374 2.650  -0.331 C16 NW3 14 
NW3 C18 C15 C 0 1 Y N N N N N -57.700 16.096 36.610 -5.423 1.370  1.400  C18 NW3 15 
NW3 C19 C16 C 0 1 Y N N N N N -56.649 15.948 37.522 -4.865 0.215  0.883  C19 NW3 16 
NW3 N04 N1  N 0 1 N N N N N N -52.927 12.703 34.793 2.395  -0.290 1.189  N04 NW3 17 
NW3 N10 N2  N 0 1 N N N N N N -52.831 14.643 36.455 -1.064 -0.725 -0.228 N10 NW3 18 
NW3 N20 N3  N 0 1 N N N N N N -54.595 16.120 39.270 -4.437 -2.072 -0.735 N20 NW3 19 
NW3 O09 O1  O 0 1 N N N N N N -49.586 15.621 36.529 0.340  -2.766 -1.085 O09 NW3 20 
NW3 O12 O2  O 0 1 N N N N N N -52.171 14.857 38.681 -2.307 -2.214 0.848  O12 NW3 21 
NW3 O22 O3  O 0 1 N N N N N N -55.521 11.953 33.903 5.913  0.636  0.997  O22 NW3 22 
NW3 O23 O4  O 0 1 N N N N N N -55.317 12.042 31.711 4.817  -1.263 0.717  O23 NW3 23 
NW3 S06 S1  S 0 1 N N N N N N -51.491 13.991 33.338 1.625  0.566  -1.122 S06 NW3 24 
NW3 H1  H1  H 0 1 N N N N N N -54.743 14.017 39.000 -3.171 -0.814 -1.843 H1  NW3 25 
NW3 H2  H2  H 0 1 N N N N N N -54.969 13.468 36.014 -3.194 1.543  -1.729 H2  NW3 26 
NW3 H3  H3  H 0 1 N N N N N N -58.557 15.412 34.782 -5.606 3.491  1.201  H3  NW3 27 
NW3 H4  H4  H 0 1 N N N N N N -51.931 12.894 30.691 2.985  3.192  -1.506 H4  NW3 28 
NW3 H5  H5  H 0 1 N N N N N N -53.645 13.358 30.420 2.366  3.081  0.159  H5  NW3 29 
NW3 H6  H6  H 0 1 N N N N N N -52.381 14.628 30.552 4.119  3.173  -0.134 H6  NW3 30 
NW3 H7  H7  H 0 1 N N N N N N -54.176 14.789 33.975 5.313  1.186  -1.171 H7  NW3 31 
NW3 H8  H8  H 0 1 N N N N N N -53.730 15.765 32.535 4.380  -0.270 -1.590 H8  NW3 32 
NW3 H9  H9  H 0 1 N N N N N N -54.994 14.496 32.403 4.168  1.224  -2.533 H9  NW3 33 
NW3 H10 H10 H 0 1 N N N N N N -52.684 11.616 32.698 3.474  1.462  1.544  H10 NW3 34 
NW3 H11 H11 H 0 1 N N N N N N -50.815 12.550 35.010 0.653  0.948  1.106  H11 NW3 35 
NW3 H12 H12 H 0 1 N N N N N N -51.495 15.387 35.072 -0.175 -1.339 1.569  H12 NW3 36 
NW3 H13 H13 H 0 1 N N N N N N -49.926 13.800 37.257 1.698  -2.681 0.356  H13 NW3 37 
NW3 H14 H14 H 0 1 N N N N N N -56.802 13.747 34.393 -4.184 3.601  -0.807 H14 NW3 38 
NW3 H15 H15 H 0 1 N N N N N N -58.470 16.832 36.786 -6.055 1.320  2.273  H15 NW3 39 
NW3 H16 H16 H 0 1 N N N N N N -56.618 16.572 38.403 -5.056 -0.736 1.359  H16 NW3 40 
NW3 H17 H17 H 0 1 N N N N N N -53.588 13.331 35.204 2.646  -1.234 0.933  H17 NW3 41 
NW3 H19 H19 H 0 1 N N N N N N -53.648 14.605 35.879 -1.007 -0.036 -0.908 H19 NW3 42 
NW3 H20 H20 H 0 1 N N N N N N -53.879 16.066 39.966 -4.718 -2.247 0.219  H20 NW3 43 
NW3 H21 H21 H 0 1 N N N N N N -54.460 16.942 38.716 -5.238 -1.876 -1.317 H21 NW3 44 
NW3 H23 H23 H 0 1 N N N N N N -56.411 11.763 33.630 6.738  0.133  1.007  H23 NW3 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NW3 C24 C02 SING N N 1  
NW3 O23 C21 DOUB N N 2  
NW3 C02 C01 SING N N 3  
NW3 C02 C03 SING N N 4  
NW3 C02 S06 SING N N 5  
NW3 C21 C03 SING N N 6  
NW3 C21 O22 SING N N 7  
NW3 C03 N04 SING N N 8  
NW3 S06 C05 SING N N 9  
NW3 N04 C05 SING N N 10 
NW3 C05 C07 SING N N 11 
NW3 C16 C17 DOUB Y N 12 
NW3 C16 C15 SING Y N 13 
NW3 C17 C18 SING Y N 14 
NW3 C07 N10 SING N N 15 
NW3 C07 C08 SING N N 16 
NW3 C15 C14 DOUB Y N 17 
NW3 N10 C11 SING N N 18 
NW3 O09 C08 DOUB N N 19 
NW3 C18 C19 DOUB Y N 20 
NW3 C14 C19 SING Y N 21 
NW3 C14 C13 SING N N 22 
NW3 C11 C13 SING N N 23 
NW3 C11 O12 DOUB N N 24 
NW3 C13 N20 SING N N 25 
NW3 C13 H1  SING N N 26 
NW3 C15 H2  SING N N 27 
NW3 C17 H3  SING N N 28 
NW3 C24 H4  SING N N 29 
NW3 C24 H5  SING N N 30 
NW3 C24 H6  SING N N 31 
NW3 C01 H7  SING N N 32 
NW3 C01 H8  SING N N 33 
NW3 C01 H9  SING N N 34 
NW3 C03 H10 SING N N 35 
NW3 C05 H11 SING N N 36 
NW3 C07 H12 SING N N 37 
NW3 C08 H13 SING N N 38 
NW3 C16 H14 SING N N 39 
NW3 C18 H15 SING N N 40 
NW3 C19 H16 SING N N 41 
NW3 N04 H17 SING N N 42 
NW3 N10 H19 SING N N 43 
NW3 N20 H20 SING N N 44 
NW3 N20 H21 SING N N 45 
NW3 O22 H23 SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NW3 SMILES           ACDLabs              12.01 "O=C(NC(C=O)C1NC(C(=O)O)C(C)(C)S1)C(N)c1ccccc1"                                                                                                                    
NW3 InChI            InChI                1.03  "InChI=1S/C16H21N3O4S/c1-16(2)12(15(22)23)19-14(24-16)10(8-20)18-13(21)11(17)9-6-4-3-5-7-9/h3-8,10-12,14,19H,17H2,1-2H3,(H,18,21)(H,22,23)/t10-,11-,12-,14-/m0/s1" 
NW3 InChIKey         InChI                1.03  WHAIWIUXAXKSOT-MNXVOIDGSA-N                                                                                                                                        
NW3 SMILES_CANONICAL CACTVS               3.385 "CC1(C)S[C@H](N[C@H]1C(O)=O)[C@@H](NC(=O)[C@@H](N)c2ccccc2)C=O"                                                                                                    
NW3 SMILES           CACTVS               3.385 "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)[CH](N)c2ccccc2)C=O"                                                                                                          
NW3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H](N[C@@H](S1)[C@H](C=O)NC(=O)[C@H](c2ccccc2)N)C(=O)O)C"                                                                                                  
NW3 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C(NC(S1)C(C=O)NC(=O)C(c2ccccc2)N)C(=O)O)C"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NW3 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"                            
NW3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},4~{S})-2-[(1~{S})-1-[[(2~{S})-2-azanyl-2-phenyl-ethanoyl]amino]-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NW3 "Create component" 2022-04-11 RCSB 
NW3 "Initial release"  2022-05-25 RCSB 
NW3 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            NW3 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C08 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
