data_VH3
# 
_chem_comp.id                                    VH3 
_chem_comp.name                                  "(2~{S},4~{R})-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-[5-fluoranyl-2-methoxy-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H36 F2 N4 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-06 
_chem_comp.pdbx_modified_date                    2023-09-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        578.671 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VH3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8CQL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VH3 C13 C1  C 0 1 Y N N 52.317 27.801 -37.465 -5.773  -0.125 0.198  C13 VH3 1  
VH3 C15 C2  C 0 1 Y N N 51.656 26.983 -34.992 -8.250  -0.587 0.324  C15 VH3 2  
VH3 C20 C3  C 0 1 Y N N 52.228 29.008 -38.154 -4.895  0.696  0.911  C20 VH3 3  
VH3 C22 C4  C 0 1 Y N N 53.041 29.249 -39.259 -3.559  0.356  1.010  C22 VH3 4  
VH3 C26 C5  C 0 1 N N N 53.663 30.811 -45.608 3.502   0.202  0.107  C26 VH3 5  
VH3 C28 C6  C 0 1 N N N 53.074 29.402 -47.634 4.862   -0.881 -1.662 C28 VH3 6  
VH3 C02 C7  C 0 1 N N R 50.770 32.209 -43.692 1.813   3.184  -1.215 C02 VH3 7  
VH3 C03 C8  C 0 1 N N N 51.661 31.432 -42.492 0.601   2.456  -0.577 C03 VH3 8  
VH3 C04 C9  C 0 1 N N S 52.868 31.216 -43.026 1.265   1.329  0.241  C04 VH3 9  
VH3 C05 C10 C 0 1 N N N 53.394 29.861 -42.572 0.439   0.072  0.147  C05 VH3 10 
VH3 C07 C11 C 0 1 N N S 54.829 28.569 -40.901 -1.631  -1.159 0.516  C07 VH3 11 
VH3 C08 C12 C 0 1 Y N N 53.941 28.267 -39.690 -3.089  -0.795 0.405  C08 VH3 12 
VH3 C09 C13 C 0 1 Y N N 54.035 27.052 -39.015 -3.954  -1.616 -0.305 C09 VH3 13 
VH3 C11 C14 C 0 1 N N N 54.547 24.746 -39.212 -4.431  -3.545 -1.611 C11 VH3 14 
VH3 C12 C15 C 0 1 Y N N 53.205 26.810 -37.908 -5.295  -1.288 -0.406 C12 VH3 15 
VH3 C14 C16 C 0 1 Y N N 51.368 27.600 -36.260 -7.203  0.234  0.090  C14 VH3 16 
VH3 C16 C17 C 0 1 N N N 52.988 26.331 -34.575 -8.084  -2.026 0.738  C16 VH3 17 
VH3 C18 C18 C 0 1 Y N N 49.403 27.669 -34.774 -9.441  1.220  -0.194 C18 VH3 18 
VH3 C23 C19 C 0 1 N N N 56.271 28.777 -40.415 -1.412  -2.008 1.770  C23 VH3 19 
VH3 C27 C20 C 0 1 N N S 53.356 30.825 -47.098 4.870   0.139  -0.521 C27 VH3 20 
VH3 C29 C21 C 0 1 N N N 51.982 28.711 -46.767 4.626   -2.281 -1.092 C29 VH3 21 
VH3 C30 C22 C 0 1 N N N 54.372 28.542 -47.608 3.742   -0.535 -2.646 C30 VH3 22 
VH3 C31 C23 C 0 1 N N N 52.562 29.528 -49.101 6.208   -0.845 -2.388 C31 VH3 23 
VH3 C33 C24 C 0 1 N N N 54.590 32.682 -48.302 7.148   0.078  0.344  C33 VH3 24 
VH3 C34 C25 C 0 1 N N N 55.903 33.156 -48.944 8.158   -0.339 1.382  C34 VH3 25 
VH3 C36 C26 C 0 1 N N N 56.084 34.674 -49.070 9.558   0.271  1.289  C36 VH3 26 
VH3 C37 C27 C 0 1 N N N 55.759 33.830 -50.310 9.335   -1.197 0.917  C37 VH3 27 
VH3 C40 C28 C 0 1 N N N 51.151 31.624 -44.875 2.778   2.003  -1.487 C40 VH3 28 
VH3 F21 F1  F 0 1 N N N 51.349 29.969 -37.739 -5.352  1.821  1.503  F21 VH3 29 
VH3 F35 F2  F 0 1 N N N 57.032 32.407 -48.776 7.643   -0.585 2.660  F35 VH3 30 
VH3 N06 N1  N 0 1 N N N 54.311 29.824 -41.420 -0.828  0.062  0.607  N06 VH3 31 
VH3 N17 N2  N 0 1 Y N N 50.465 27.023 -34.124 -9.425  -0.021 0.163  N17 VH3 32 
VH3 N25 N3  N 0 1 N N N 52.637 31.185 -44.627 2.597   1.096  -0.338 N25 VH3 33 
VH3 N32 N4  N 0 1 N N N 54.553 31.329 -47.725 5.852   -0.266 0.488  N32 VH3 34 
VH3 O01 O1  O 0 1 N N N 51.061 33.561 -43.696 2.390   4.117  -0.299 O01 VH3 35 
VH3 O10 O2  O 0 1 N N N 54.946 26.072 -39.478 -3.486  -2.747 -0.897 O10 VH3 36 
VH3 O24 O3  O 0 1 N N N 53.065 28.861 -43.125 0.914   -0.931 -0.342 O24 VH3 37 
VH3 O38 O4  O 0 1 N N N 53.635 33.379 -48.285 7.500   0.722  -0.621 O38 VH3 38 
VH3 O39 O5  O 0 1 N N N 54.743 30.518 -45.214 3.215   -0.552 1.013  O39 VH3 39 
VH3 S19 S1  S 0 1 Y N N 49.862 28.144 -36.268 -7.846  1.810  -0.364 S19 VH3 40 
VH3 H1  H1  H 0 1 N N N 52.977 30.192 -39.782 -2.881  0.990  1.560  H1  VH3 41 
VH3 H2  H2  H 0 1 N N N 49.706 32.030 -43.479 1.528   3.677  -2.144 H2  VH3 42 
VH3 H3  H3  H 0 1 N N N 51.744 32.071 -41.600 0.045   3.130  0.075  H3  VH3 43 
VH3 H4  H4  H 0 1 N N N 51.186 30.479 -42.217 -0.051  2.044  -1.348 H4  VH3 44 
VH3 H5  H5  H 0 1 N N N 53.595 32.006 -42.785 1.360   1.633  1.283  H5  VH3 45 
VH3 H6  H6  H 0 1 N N N 54.776 27.758 -41.642 -1.330  -1.728 -0.364 H6  VH3 46 
VH3 H7  H7  H 0 1 N N N 55.304 24.050 -39.601 -5.216  -3.875 -0.930 H7  VH3 47 
VH3 H8  H8  H 0 1 N N N 54.443 24.605 -38.126 -4.872  -2.955 -2.415 H8  VH3 48 
VH3 H9  H9  H 0 1 N N N 53.582 24.549 -39.701 -3.927  -4.414 -2.034 H9  VH3 49 
VH3 H10 H10 H 0 1 N N N 53.251 25.859 -37.397 -5.969  -1.927 -0.958 H10 VH3 50 
VH3 H11 H11 H 0 1 N N N 52.893 25.920 -33.559 -7.952  -2.647 -0.148 H11 VH3 51 
VH3 H12 H12 H 0 1 N N N 53.235 25.521 -35.277 -7.209  -2.121 1.381  H12 VH3 52 
VH3 H13 H13 H 0 1 N N N 53.787 27.087 -34.592 -8.971  -2.352 1.281  H13 VH3 53 
VH3 H14 H14 H 0 1 N N N 48.423 27.829 -34.348 -10.335 1.802  -0.360 H14 VH3 54 
VH3 H15 H15 H 0 1 N N N 56.666 27.829 -40.021 -1.713  -1.440 2.651  H15 VH3 55 
VH3 H16 H16 H 0 1 N N N 56.896 29.114 -41.255 -2.010  -2.917 1.703  H16 VH3 56 
VH3 H17 H17 H 0 1 N N N 56.284 29.537 -39.620 -0.357  -2.272 1.851  H17 VH3 57 
VH3 H18 H18 H 0 1 N N N 52.494 31.477 -47.301 5.136   1.121  -0.913 H18 VH3 58 
VH3 H19 H19 H 0 1 N N N 52.339 28.620 -45.731 4.620   -3.007 -1.905 H19 VH3 59 
VH3 H20 H20 H 0 1 N N N 51.063 29.315 -46.786 5.424   -2.527 -0.391 H20 VH3 60 
VH3 H21 H21 H 0 1 N N N 51.772 27.710 -47.172 3.667   -2.306 -0.575 H21 VH3 61 
VH3 H22 H22 H 0 1 N N N 54.733 28.453 -46.573 3.947   0.433  -3.104 H22 VH3 62 
VH3 H23 H23 H 0 1 N N N 54.156 27.540 -48.008 3.691   -1.300 -3.421 H23 VH3 63 
VH3 H24 H24 H 0 1 N N N 55.144 29.025 -48.225 2.792   -0.492 -2.114 H24 VH3 64 
VH3 H25 H25 H 0 1 N N N 51.645 30.136 -49.119 6.376   0.153  -2.793 H25 VH3 65 
VH3 H26 H26 H 0 1 N N N 53.334 30.011 -49.718 7.005   -1.091 -1.687 H26 VH3 66 
VH3 H27 H27 H 0 1 N N N 52.346 28.526 -49.501 6.202   -1.571 -3.201 H27 VH3 67 
VH3 H28 H28 H 0 1 N N N 57.082 35.121 -48.954 9.749   0.973  0.478  H28 VH3 68 
VH3 H29 H29 H 0 1 N N N 55.327 35.355 -48.654 10.078  0.480  2.224  H29 VH3 69 
VH3 H30 H30 H 0 1 N N N 54.769 33.907 -50.783 9.710   -1.954 1.607  H30 VH3 70 
VH3 H31 H31 H 0 1 N N N 56.525 33.673 -51.084 9.380   -1.461 -0.140 H31 VH3 71 
VH3 H32 H32 H 0 1 N N N 51.090 32.345 -45.704 2.508   1.498  -2.415 H32 VH3 72 
VH3 H33 H33 H 0 1 N N N 50.519 30.752 -45.100 3.808   2.357  -1.532 H33 VH3 73 
VH3 H34 H34 H 0 1 N N N 54.584 30.682 -40.985 -1.207  0.865  0.998  H34 VH3 74 
VH3 H35 H35 H 0 1 N N N 55.368 30.752 -47.768 5.570   -0.781 1.260  H35 VH3 75 
VH3 H36 H36 H 0 1 N N N 50.790 33.946 -42.871 3.151   4.597  -0.653 H36 VH3 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VH3 C37 C36 SING N N 1  
VH3 C37 C34 SING N N 2  
VH3 C31 C28 SING N N 3  
VH3 C36 C34 SING N N 4  
VH3 C34 F35 SING N N 5  
VH3 C34 C33 SING N N 6  
VH3 C33 O38 DOUB N N 7  
VH3 C33 N32 SING N N 8  
VH3 N32 C27 SING N N 9  
VH3 C28 C30 SING N N 10 
VH3 C28 C27 SING N N 11 
VH3 C28 C29 SING N N 12 
VH3 C27 C26 SING N N 13 
VH3 C26 O39 DOUB N N 14 
VH3 C26 N25 SING N N 15 
VH3 C40 N25 SING N N 16 
VH3 C40 C02 SING N N 17 
VH3 N25 C04 SING N N 18 
VH3 O01 C02 SING N N 19 
VH3 C02 C03 SING N N 20 
VH3 O24 C05 DOUB N N 21 
VH3 C04 C05 SING N N 22 
VH3 C04 C03 SING N N 23 
VH3 C05 N06 SING N N 24 
VH3 N06 C07 SING N N 25 
VH3 C07 C23 SING N N 26 
VH3 C07 C08 SING N N 27 
VH3 C08 C22 DOUB Y N 28 
VH3 C08 C09 SING Y N 29 
VH3 O10 C11 SING N N 30 
VH3 O10 C09 SING N N 31 
VH3 C22 C20 SING Y N 32 
VH3 C09 C12 DOUB Y N 33 
VH3 C20 F21 SING N N 34 
VH3 C20 C13 DOUB Y N 35 
VH3 C12 C13 SING Y N 36 
VH3 C13 C14 SING N N 37 
VH3 S19 C14 SING Y N 38 
VH3 S19 C18 SING Y N 39 
VH3 C14 C15 DOUB Y N 40 
VH3 C15 C16 SING N N 41 
VH3 C15 N17 SING Y N 42 
VH3 C18 N17 DOUB Y N 43 
VH3 C22 H1  SING N N 44 
VH3 C02 H2  SING N N 45 
VH3 C03 H3  SING N N 46 
VH3 C03 H4  SING N N 47 
VH3 C04 H5  SING N N 48 
VH3 C07 H6  SING N N 49 
VH3 C11 H7  SING N N 50 
VH3 C11 H8  SING N N 51 
VH3 C11 H9  SING N N 52 
VH3 C12 H10 SING N N 53 
VH3 C16 H11 SING N N 54 
VH3 C16 H12 SING N N 55 
VH3 C16 H13 SING N N 56 
VH3 C18 H14 SING N N 57 
VH3 C23 H15 SING N N 58 
VH3 C23 H16 SING N N 59 
VH3 C23 H17 SING N N 60 
VH3 C27 H18 SING N N 61 
VH3 C29 H19 SING N N 62 
VH3 C29 H20 SING N N 63 
VH3 C29 H21 SING N N 64 
VH3 C30 H22 SING N N 65 
VH3 C30 H23 SING N N 66 
VH3 C30 H24 SING N N 67 
VH3 C31 H25 SING N N 68 
VH3 C31 H26 SING N N 69 
VH3 C31 H27 SING N N 70 
VH3 C36 H28 SING N N 71 
VH3 C36 H29 SING N N 72 
VH3 C37 H30 SING N N 73 
VH3 C37 H31 SING N N 74 
VH3 C40 H32 SING N N 75 
VH3 C40 H33 SING N N 76 
VH3 N06 H34 SING N N 77 
VH3 N32 H35 SING N N 78 
VH3 O01 H36 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VH3 InChI            InChI                1.06  "InChI=1S/C28H36F2N4O5S/c1-14(17-10-19(29)18(11-21(17)39-6)22-15(2)31-13-40-22)32-24(36)20-9-16(35)12-34(20)25(37)23(27(3,4)5)33-26(38)28(30)7-8-28/h10-11,13-14,16,20,23,35H,7-9,12H2,1-6H3,(H,32,36)(H,33,38)/t14-,16+,20-,23+/m0/s1" 
VH3 InChIKey         InChI                1.06  PWPAOVSRKMPDRI-SKSOZTCFSA-N                                                                                                                                                                                                             
VH3 SMILES_CANONICAL CACTVS               3.385 "COc1cc(c(F)cc1[C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C3(F)CC3)C(C)(C)C)c4scnc4C"                                                                                                                                          
VH3 SMILES           CACTVS               3.385 "COc1cc(c(F)cc1[CH](C)NC(=O)[CH]2C[CH](O)CN2C(=O)[CH](NC(=O)C3(F)CC3)C(C)(C)C)c4scnc4C"                                                                                                                                                 
VH3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2cc(c(cc2F)[C@H](C)NC(=O)[C@@H]3C[C@H](CN3C(=O)[C@H](C(C)(C)C)NC(=O)C4(CC4)F)O)OC"                                                                                                                                          
VH3 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2cc(c(cc2F)C(C)NC(=O)C3CC(CN3C(=O)C(C(C)(C)C)NC(=O)C4(CC4)F)O)OC"                                                                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           VH3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S},4~{R})-1-[(2~{S})-2-[(1-fluoranylcyclopropyl)carbonylamino]-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-[5-fluoranyl-2-methoxy-4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VH3 "Create component" 2023-03-06 PDBE 
VH3 "Initial release"  2023-09-27 RCSB 
# 
