data_2V4
#

_chem_comp.id                                   2V4
_chem_comp.name                                 rabelomycin
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H14 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(3R)-3,6,8-trihydroxy-3-methyl-3,4-dihydrotetraphene-1,7,12(2H)-trione"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-02-19
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       338.311
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    2V4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4OSP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2V4  OAC  OAC  O  0  1  N  N  N  -24.512  15.228   1.021  -0.102  -2.358   0.367  OAC  2V4   1  
2V4  CAS  CAS  C  0  1  N  N  N  -24.069  14.188   0.533  -0.665  -1.304   0.147  CAS  2V4   2  
2V4  CAX  CAX  C  0  1  Y  N  N  -22.912  13.578   1.055   0.113  -0.053   0.005  CAX  2V4   3  
2V4  CAR  CAR  C  0  1  Y  N  N  -22.186  14.122   2.147   1.505  -0.091  -0.169  CAR  2V4   4  
2V4  CAN  CAN  C  0  1  N  N  N  -22.529  15.279   2.859   2.202  -1.391  -0.203  CAN  2V4   5  
2V4  OAB  OAB  O  0  1  N  N  N  -22.714  16.357   2.302   1.636  -2.415   0.117  OAB  2V4   6  
2V4  CAL  CAL  C  0  1  N  N  N  -22.577  15.198   4.263   3.648  -1.403  -0.651  CAL  2V4   7  
2V4  CAY  CAY  C  0  1  N  N  R  -21.374  14.377   4.834   4.343  -0.206   0.012  CAY  2V4   8  
2V4  CAA  CAA  C  0  1  N  N  N  -21.882  13.084   5.484   5.834  -0.228  -0.329  CAA  2V4   9  
2V4  OAG  OAG  O  0  1  N  N  N  -20.697  15.147   5.833   4.176  -0.283   1.429  OAG  2V4  10  
2V4  CAM  CAM  C  0  1  N  N  N  -20.372  14.029   3.712   3.722   1.089  -0.504  CAM  2V4  11  
2V4  CAQ  CAQ  C  0  1  Y  N  N  -21.049  13.476   2.621   2.230   1.098  -0.306  CAQ  2V4  12  
2V4  CAK  CAK  C  0  1  Y  N  N  -20.600  12.301   2.040   1.571   2.310  -0.261  CAK  2V4  13  
2V4  CAP  CAP  C  0  1  Y  N  N  -21.292  11.775   0.965   0.191   2.366  -0.087  CAP  2V4  14  
2V4  OAF  OAF  O  0  1  N  N  N  -20.867  10.634   0.360  -0.438   3.565  -0.046  OAF  2V4  15  
2V4  CAW  CAW  C  0  1  Y  N  N  -22.447  12.387   0.461  -0.548   1.184   0.045  CAW  2V4  16  
2V4  CAT  CAT  C  0  1  N  N  N  -23.128  11.807  -0.622  -2.013   1.227   0.222  CAT  2V4  17  
2V4  OAD  OAD  O  0  1  N  N  N  -22.709  10.760  -1.126  -2.567   2.272   0.506  OAD  2V4  18  
2V4  CAV  CAV  C  0  1  Y  N  N  -24.283  12.426  -1.127  -2.797  -0.011   0.051  CAV  2V4  19  
2V4  CAU  CAU  C  0  1  Y  N  N  -24.740  13.611  -0.552  -2.137  -1.256   0.012  CAU  2V4  20  
2V4  CAJ  CAJ  C  0  1  Y  N  N  -25.889  14.228  -1.058  -2.874  -2.424  -0.147  CAJ  2V4  21  
2V4  CAH  CAH  C  0  1  Y  N  N  -26.584  13.685  -2.131  -4.254  -2.360  -0.268  CAH  2V4  22  
2V4  CAI  CAI  C  0  1  Y  N  N  -26.130  12.511  -2.713  -4.906  -1.145  -0.233  CAI  2V4  23  
2V4  CAO  CAO  C  0  1  Y  N  N  -24.991  11.894  -2.210  -4.187   0.038  -0.077  CAO  2V4  24  
2V4  OAE  OAE  O  0  1  N  N  N  -24.522  10.745  -2.756  -4.834   1.230  -0.042  OAE  2V4  25  
2V4  H1   H1   H  0  1  N  N  N  -22.545  16.215   4.681   4.127  -2.330  -0.336  H1   2V4  26  
2V4  H2   H2   H  0  1  N  N  N  -23.516  14.709   4.560   3.701  -1.307  -1.736  H2   2V4  27  
2V4  H3   H3   H  0  1  N  N  N  -22.596  13.331   6.284   5.961  -0.168  -1.410  H3   2V4  28  
2V4  H4   H4   H  0  1  N  N  N  -22.382  12.464   4.725   6.327   0.622   0.143  H4   2V4  29  
2V4  H5   H5   H  0  1  N  N  N  -21.033  12.529   5.909   6.277  -1.154   0.038  H5   2V4  30  
2V4  H6   H6   H  0  1  N  N  N  -21.305  15.367   6.529   4.547  -1.084   1.825  H6   2V4  31  
2V4  H7   H7   H  0  1  N  N  N  -19.638  13.303   4.091   4.158   1.932   0.032  H7   2V4  32  
2V4  H8   H8   H  0  1  N  N  N  -19.851  14.944   3.392   3.940   1.191  -1.567  H8   2V4  33  
2V4  H9   H9   H  0  1  N  N  N  -19.721  11.803   2.422   2.133   3.227  -0.362  H9   2V4  34  
2V4  H10  H10  H  0  1  N  N  N  -21.461  10.409  -0.346  -0.732   3.885  -0.910  H10  2V4  35  
2V4  H11  H11  H  0  1  N  N  N  -26.242  15.143  -0.606  -2.373  -3.380  -0.176  H11  2V4  36  
2V4  H12  H12  H  0  1  N  N  N  -27.470  14.173  -2.509  -4.823  -3.270  -0.392  H12  2V4  37  
2V4  H13  H13  H  0  1  N  N  N  -26.658  12.080  -3.551  -5.981  -1.111  -0.333  H13  2V4  38  
2V4  H14  H14  H  0  1  N  N  N  -23.741  10.469  -2.291  -5.101   1.507   0.845  H14  2V4  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2V4  OAE  CAO  SING  N  N   1  
2V4  CAI  CAO  DOUB  Y  N   2  
2V4  CAI  CAH  SING  Y  N   3  
2V4  CAO  CAV  SING  Y  N   4  
2V4  CAH  CAJ  DOUB  Y  N   5  
2V4  CAV  CAT  SING  N  N   6  
2V4  CAV  CAU  DOUB  Y  N   7  
2V4  OAD  CAT  DOUB  N  N   8  
2V4  CAJ  CAU  SING  Y  N   9  
2V4  CAT  CAW  SING  N  N  10  
2V4  CAU  CAS  SING  N  N  11  
2V4  OAF  CAP  SING  N  N  12  
2V4  CAW  CAP  DOUB  Y  N  13  
2V4  CAW  CAX  SING  Y  N  14  
2V4  CAS  OAC  DOUB  N  N  15  
2V4  CAS  CAX  SING  N  N  16  
2V4  CAP  CAK  SING  Y  N  17  
2V4  CAX  CAR  DOUB  Y  N  18  
2V4  CAK  CAQ  DOUB  Y  N  19  
2V4  CAR  CAQ  SING  Y  N  20  
2V4  CAR  CAN  SING  N  N  21  
2V4  OAB  CAN  DOUB  N  N  22  
2V4  CAQ  CAM  SING  N  N  23  
2V4  CAN  CAL  SING  N  N  24  
2V4  CAM  CAY  SING  N  N  25  
2V4  CAL  CAY  SING  N  N  26  
2V4  CAY  CAA  SING  N  N  27  
2V4  CAY  OAG  SING  N  N  28  
2V4  CAL  H1   SING  N  N  29  
2V4  CAL  H2   SING  N  N  30  
2V4  CAA  H3   SING  N  N  31  
2V4  CAA  H4   SING  N  N  32  
2V4  CAA  H5   SING  N  N  33  
2V4  OAG  H6   SING  N  N  34  
2V4  CAM  H7   SING  N  N  35  
2V4  CAM  H8   SING  N  N  36  
2V4  CAK  H9   SING  N  N  37  
2V4  OAF  H10  SING  N  N  38  
2V4  CAJ  H11  SING  N  N  39  
2V4  CAH  H12  SING  N  N  40  
2V4  CAI  H13  SING  N  N  41  
2V4  OAE  H14  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2V4  SMILES            ACDLabs               12.01  "O=C2c4c(C(=O)c3c1C(=O)CC(O)(C)Cc1cc(O)c23)cccc4O"  
2V4  InChI             InChI                 1.03   "InChI=1S/C19H14O6/c1-19(25)6-8-5-11(21)15-16(13(8)12(22)7-19)17(23)9-3-2-4-10(20)14(9)18(15)24/h2-5,20-21,25H,6-7H2,1H3/t19-/m1/s1"  
2V4  InChIKey          InChI                 1.03   JJOLHRYZQSDLSA-LJQANCHMSA-N  
2V4  SMILES_CANONICAL  CACTVS                3.385  "C[C@]1(O)CC(=O)c2c(C1)cc(O)c3C(=O)c4c(O)cccc4C(=O)c23"  
2V4  SMILES            CACTVS                3.385  "C[C]1(O)CC(=O)c2c(C1)cc(O)c3C(=O)c4c(O)cccc4C(=O)c23"  
2V4  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@]1(Cc2cc(c3c(c2C(=O)C1)C(=O)c4cccc(c4C3=O)O)O)O"  
2V4  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1(Cc2cc(c3c(c2C(=O)C1)C(=O)c4cccc(c4C3=O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2V4  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R)-3,6,8-trihydroxy-3-methyl-3,4-dihydrotetraphene-1,7,12(2H)-trione"  
2V4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(3R)-3-methyl-3,6,8-tris(oxidanyl)-2,4-dihydrobenzo[a]anthracene-1,7,12-trione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2V4  "Create component"  2014-02-19  RCSB  
2V4  "Initial release"   2014-10-01  RCSB  
2V4  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     2V4
_pdbx_chem_comp_synonyms.name        "(3R)-3,6,8-trihydroxy-3-methyl-3,4-dihydrotetraphene-1,7,12(2H)-trione"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
