data_6M4
# 
_chem_comp.id                                    6M4 
_chem_comp.name                                  1,1-dihydroxy-1,3-dihydro-2,1-benzoxaborol-1-ium 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H8 B O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    -1 
_chem_comp.pdbx_initial_date                     2016-05-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        150.948 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6M4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JQ0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6M4 C5 C1 C 0  1 Y N N N N N -5.941 4.017  14.293 1.977  -1.162 -0.006 C5 6M4 1  
6M4 C4 C2 C 0  1 Y N N N N N -6.696 4.601  15.292 2.862  -0.097 0.005  C4 6M4 2  
6M4 C3 C3 C 0  1 Y N N N N N -6.852 3.982  16.535 2.385  1.200  0.016  C3 6M4 3  
6M4 C2 C4 C 0  1 Y N N N N N -6.246 2.758  16.787 1.021  1.437  0.015  C2 6M4 4  
6M4 C1 C5 C 0  1 Y N N N N N -5.478 2.154  15.785 0.142  0.377  0.003  C1 6M4 5  
6M4 C6 C6 C 0  1 Y N N N N N -5.334 2.787  14.550 0.621  -0.925 -0.006 C6 6M4 6  
6M4 C7 C7 C 0  1 N N N N N N -4.480 2.000  13.605 -0.593 -1.824 -0.013 C7 6M4 7  
6M4 O1 O1 O 0  1 N N N N N N -4.355 0.755  14.305 -1.702 -1.009 -0.428 O1 6M4 8  
6M4 B1 B1 B -1 1 N N N N N N -4.641 0.764  15.751 -1.413 0.270  -0.005 B1 6M4 9  
6M4 O3 O2 O 0  1 N N N N N N -5.289 -0.446 16.147 -1.942 1.183  -0.875 O3 6M4 10 
6M4 O2 O3 O 0  1 N N N N N N -3.444 0.879  16.526 -1.906 0.472  1.253  O2 6M4 11 
6M4 H1 H1 H 0  1 N N N N N N -5.823 4.501  13.335 2.350  -2.176 -0.019 H1 6M4 12 
6M4 H2 H2 H 0  1 N N N N N N -7.174 5.552  15.109 3.926  -0.281 0.006  H2 6M4 13 
6M4 H3 H3 H 0  1 N N N N N N -7.446 4.457  17.302 3.077  2.029  0.025  H3 6M4 14 
6M4 H4 H4 H 0  1 N N N N N N -6.366 2.277  17.747 0.647  2.451  0.024  H4 6M4 15 
6M4 H5 H5 H 0  1 N N N N N N -3.500 2.477  13.456 -0.447 -2.644 -0.717 H5 6M4 16 
6M4 H6 H6 H 0  1 N N N N N N -4.975 1.866  12.632 -0.772 -2.218 0.988  H6 6M4 17 
6M4 H7 H7 H 0  1 N N N N N N -5.465 -0.421 17.080 -2.906 1.144  -0.948 H7 6M4 18 
6M4 H8 H8 H 0  1 N N N N N N -3.664 0.882  17.450 -2.868 0.387  1.318  H8 6M4 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6M4 C7 O1 SING N N 1  
6M4 C7 C6 SING N N 2  
6M4 C5 C6 DOUB Y N 3  
6M4 C5 C4 SING Y N 4  
6M4 O1 B1 SING N N 5  
6M4 C6 C1 SING Y N 6  
6M4 C4 C3 DOUB Y N 7  
6M4 B1 C1 SING N N 8  
6M4 B1 O3 SING N N 9  
6M4 B1 O2 SING N N 10 
6M4 C1 C2 DOUB Y N 11 
6M4 C3 C2 SING Y N 12 
6M4 C5 H1 SING N N 13 
6M4 C4 H2 SING N N 14 
6M4 C3 H3 SING N N 15 
6M4 C2 H4 SING N N 16 
6M4 C7 H5 SING N N 17 
6M4 C7 H6 SING N N 18 
6M4 O3 H7 SING N N 19 
6M4 O2 H8 SING N N 20 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6M4 SMILES           ACDLabs              12.01 "c1c2c(ccc1)[B+](OC2)(O)O"                                         
6M4 InChI            InChI                1.03  "InChI=1S/C7H8BO3/c9-8(10)7-4-2-1-3-6(7)5-11-8/h1-4,9-10H,5H2/q-1" 
6M4 InChIKey         InChI                1.03  LFYLOXDIRWAWMG-UHFFFAOYSA-N                                        
6M4 SMILES_CANONICAL CACTVS               3.385 "O[B-]1(O)OCc2ccccc12"                                             
6M4 SMILES           CACTVS               3.385 "O[B-]1(O)OCc2ccccc12"                                             
6M4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-]1(c2ccccc2CO1)(O)O"                                           
6M4 SMILES           "OpenEye OEToolkits" 2.0.7 "[B-]1(c2ccccc2CO1)(O)O"                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6M4 "SYSTEMATIC NAME" ACDLabs              12.01 1,1-dihydroxy-1,3-dihydro-2,1-benzoxaborol-1-ium                     
6M4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-triene" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6M4 "Create component"   2016-05-04 PDBE 
6M4 "Initial release"    2016-10-19 RCSB 
6M4 "Other modification" 2019-10-18 PDBE 
6M4 "Modify PCM"         2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 6M4 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" B1 ND1 ? ? 
2 6M4 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" B1 NE2 ? ? 
# 
