data_9L4
# 
_chem_comp.id                                    9L4 
_chem_comp.name                                  "3-chloro-4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H23 Cl2 F2 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-19 
_chem_comp.pdbx_modified_date                    2017-06-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        558.403 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9L4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Q0N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9L4 N1   N1  N  0 1 Y N N 23.139 18.072 3.553 1.985  -0.671 0.129  N1   9L4 1  
9L4 N3   N2  N  0 1 Y N N 22.821 16.370 2.124 2.792  -2.516 -0.739 N3   9L4 2  
9L4 C4   C1  C  0 1 Y N N 24.367 17.445 3.423 3.199  -0.350 -0.448 C4   9L4 3  
9L4 C5   C2  C  0 1 Y N N 24.161 16.398 2.543 3.700  -1.543 -0.998 C5   9L4 4  
9L4 C6   C3  C  0 1 N N N 23.759 20.458 4.064 -0.202 0.380  0.054  C6   9L4 5  
9L4 C7   C4  C  0 1 N N S 22.802 19.283 4.416 1.084  0.248  0.829  C7   9L4 6  
9L4 C8   C5  C  0 1 Y N N 25.594 17.720 4.007 3.927  0.826  -0.563 C8   9L4 7  
9L4 C10  C6  C  0 1 Y N N 25.229 15.569 2.207 4.935  -1.534 -1.655 C10  9L4 8  
9L4 C13  C7  C  0 1 N N N 27.530 24.634 0.631 -6.162 1.243  -2.174 C13  9L4 9  
9L4 C15  C8  C  0 1 Y N N 26.451 15.845 2.786 5.644  -0.358 -1.762 C15  9L4 10 
9L4 C17  C9  C  0 1 Y N N 24.464 22.845 1.974 -3.404 2.058  0.236  C17  9L4 11 
9L4 C21  C10 C  0 1 Y N N 26.287 21.272 1.936 -2.740 0.155  -1.090 C21  9L4 12 
9L4 C22  C11 C  0 1 Y N N 27.114 22.270 1.427 -3.938 0.203  -1.766 C22  9L4 13 
9L4 C24  C12 C  0 1 Y N N 19.813 16.910 3.100 0.306  -4.016 -0.180 C24  9L4 14 
9L4 O20  O1  O  0 1 N N N 27.022 25.822 0.668 -7.066 2.195  -1.870 O20  9L4 15 
9L4 O29  O2  O  0 1 N N N 28.653 24.400 0.180 -6.405 0.430  -3.043 O29  9L4 16 
9L4 C16  C13 C  0 1 Y N N 26.626 23.552 1.189 -4.877 1.189  -1.451 C16  9L4 17 
9L4 C12  C14 C  0 1 Y N N 24.944 21.544 2.216 -2.467 1.080  -0.087 C12  9L4 18 
9L4 N9   N3  N  0 1 N N N 24.081 20.551 2.745 -1.252 1.028  0.596  N9   9L4 19 
9L4 O19  O3  O  0 1 N N N 24.177 21.222 4.923 -0.291 -0.098 -1.058 O19  9L4 20 
9L4 C23  C15 C  0 1 N N N 22.837 18.909 5.922 1.750  1.620  0.950  C23  9L4 21 
9L4 C34  C16 C  0 1 N N N 21.973 19.842 6.768 0.753  2.620  1.540  C34  9L4 22 
9L4 C37  C17 C  0 1 N N N 22.104 19.520 8.269 1.418  3.993  1.660  C37  9L4 23 
9L4 C38  C18 C  0 1 N N N 21.709 18.064 8.576 2.639  3.889  2.576  C38  9L4 24 
9L4 C36  C19 C  0 1 N N N 22.480 17.066 7.692 3.636  2.889  1.986  C36  9L4 25 
9L4 C35  C20 C  0 1 N N N 22.386 17.457 6.171 2.971  1.516  1.865  C35  9L4 26 
9L4 C2   C21 C  0 1 Y N N 22.251 17.384 2.747 1.778  -2.008 -0.082 C2   9L4 27 
9L4 F27  F1  F  0 1 N N N 27.511 15.068 2.489 6.837  -0.350 -2.395 F27  9L4 28 
9L4 C11  C22 C  0 1 Y N N 26.625 16.898 3.666 5.143  0.820  -1.217 C11  9L4 29 
9L4 F26  F2  F  0 1 N N N 27.846 17.119 4.203 5.850  1.966  -1.330 F26  9L4 30 
9L4 C14  C23 C  0 1 Y N N 20.822 17.742 2.609 0.594  -2.768 0.375  C14  9L4 31 
9L4 C32  C24 C  0 1 Y N N 18.476 17.265 2.969 -0.803 -4.717 0.245  C32  9L4 32 
9L4 C30  C25 C  0 1 Y N N 18.154 18.459 2.352 -1.627 -4.188 1.225  C30  9L4 33 
9L4 CL33 CL1 CL 0 0 N N N 16.482 18.916 2.190 -3.021 -5.076 1.755  CL33 9L4 34 
9L4 C31  C26 C  0 1 Y N N 19.131 19.304 1.863 -1.342 -2.953 1.783  C31  9L4 35 
9L4 C25  C27 C  0 1 Y N N 20.461 18.942 1.994 -0.239 -2.240 1.362  C25  9L4 36 
9L4 CL28 CL2 CL 0 0 N N N 22.802 23.241 2.304 -3.058 3.210  1.487  CL28 9L4 37 
9L4 C18  C28 C  0 1 Y N N 25.287 23.834 1.467 -4.602 2.115  -0.440 C18  9L4 38 
9L4 H1   H1  H  0 1 N N N 21.777 19.601 4.173 0.870  -0.141 1.824  H1   9L4 39 
9L4 H2   H2  H  0 1 N N N 25.725 18.542 4.695 3.543  1.743  -0.141 H2   9L4 40 
9L4 H3   H3  H  0 1 N N N 25.106 14.744 1.521 5.331  -2.446 -2.076 H3   9L4 41 
9L4 H4   H4  H  0 1 N N N 26.684 20.284 2.115 -2.010 -0.602 -1.338 H4   9L4 42 
9L4 H5   H5  H  0 1 N N N 28.149 22.046 1.214 -4.149 -0.516 -2.544 H5   9L4 43 
9L4 H6   H6  H  0 1 N N N 20.075 15.982 3.586 0.947  -4.429 -0.944 H6   9L4 44 
9L4 H7   H7  H  0 1 N N N 27.641 26.443 0.303 -7.893 2.190  -2.370 H7   9L4 45 
9L4 H8   H8  H  0 1 N N N 23.687 19.882 2.114 -1.163 1.458  1.460  H8   9L4 46 
9L4 H9   H9  H  0 1 N N N 23.877 19.003 6.266 2.063  1.960  -0.037 H9   9L4 47 
9L4 H10  H10 H  0 1 N N N 22.292 20.880 6.595 -0.117 2.694  0.887  H10  9L4 48 
9L4 H11  H11 H  0 1 N N N 20.921 19.727 6.467 0.439  2.281  2.527  H11  9L4 49 
9L4 H12  H12 H  0 1 N N N 23.148 19.679 8.578 1.732  4.332  0.674  H12  9L4 50 
9L4 H13  H13 H  0 1 N N N 21.447 20.195 8.837 0.708  4.705  2.081  H13  9L4 51 
9L4 H14  H14 H  0 1 N N N 20.631 17.941 8.395 3.113  4.866  2.662  H14  9L4 52 
9L4 H15  H15 H  0 1 N N N 21.930 17.850 9.632 2.325  3.549  3.563  H15  9L4 53 
9L4 H16  H16 H  0 1 N N N 22.054 16.061 7.831 3.950  3.228  0.999  H16  9L4 54 
9L4 H17  H17 H  0 1 N N N 23.537 17.061 7.996 4.506  2.815  2.639  H17  9L4 55 
9L4 H18  H18 H  0 1 N N N 21.343 17.347 5.839 2.657  1.177  2.852  H18  9L4 56 
9L4 H19  H19 H  0 1 N N N 23.029 16.780 5.589 3.681  0.804  1.445  H19  9L4 57 
9L4 H20  H20 H  0 1 N N N 17.698 16.616 3.344 -1.030 -5.680 -0.187 H20  9L4 58 
9L4 H21  H21 H  0 1 N N N 18.861 20.234 1.385 -1.988 -2.545 2.546  H21  9L4 59 
9L4 H22  H22 H  0 1 N N N 21.231 19.598 1.615 -0.019 -1.277 1.798  H22  9L4 60 
9L4 H23  H23 H  0 1 N N N 24.894 24.824 1.286 -5.329 2.873  -0.189 H23  9L4 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9L4 O29  C13  DOUB N N 1  
9L4 C13  O20  SING N N 2  
9L4 C13  C16  SING N N 3  
9L4 C16  C22  DOUB Y N 4  
9L4 C16  C18  SING Y N 5  
9L4 C22  C21  SING Y N 6  
9L4 C18  C17  DOUB Y N 7  
9L4 C31  C25  DOUB Y N 8  
9L4 C31  C30  SING Y N 9  
9L4 C21  C12  DOUB Y N 10 
9L4 C17  C12  SING Y N 11 
9L4 C17  CL28 SING N N 12 
9L4 C25  C14  SING Y N 13 
9L4 N3   C5   SING Y N 14 
9L4 N3   C2   DOUB Y N 15 
9L4 CL33 C30  SING N N 16 
9L4 C10  C5   DOUB Y N 17 
9L4 C10  C15  SING Y N 18 
9L4 C12  N9   SING N N 19 
9L4 C30  C32  DOUB Y N 20 
9L4 F27  C15  SING N N 21 
9L4 C5   C4   SING Y N 22 
9L4 C14  C2   SING N N 23 
9L4 C14  C24  DOUB Y N 24 
9L4 N9   C6   SING N N 25 
9L4 C2   N1   SING Y N 26 
9L4 C15  C11  DOUB Y N 27 
9L4 C32  C24  SING Y N 28 
9L4 C4   N1   SING Y N 29 
9L4 C4   C8   DOUB Y N 30 
9L4 N1   C7   SING N N 31 
9L4 C11  C8   SING Y N 32 
9L4 C11  F26  SING N N 33 
9L4 C6   C7   SING N N 34 
9L4 C6   O19  DOUB N N 35 
9L4 C7   C23  SING N N 36 
9L4 C23  C35  SING N N 37 
9L4 C23  C34  SING N N 38 
9L4 C35  C36  SING N N 39 
9L4 C34  C37  SING N N 40 
9L4 C36  C38  SING N N 41 
9L4 C37  C38  SING N N 42 
9L4 C7   H1   SING N N 43 
9L4 C8   H2   SING N N 44 
9L4 C10  H3   SING N N 45 
9L4 C21  H4   SING N N 46 
9L4 C22  H5   SING N N 47 
9L4 C24  H6   SING N N 48 
9L4 O20  H7   SING N N 49 
9L4 N9   H8   SING N N 50 
9L4 C23  H9   SING N N 51 
9L4 C34  H10  SING N N 52 
9L4 C34  H11  SING N N 53 
9L4 C37  H12  SING N N 54 
9L4 C37  H13  SING N N 55 
9L4 C38  H14  SING N N 56 
9L4 C38  H15  SING N N 57 
9L4 C36  H16  SING N N 58 
9L4 C36  H17  SING N N 59 
9L4 C35  H18  SING N N 60 
9L4 C35  H19  SING N N 61 
9L4 C32  H20  SING N N 62 
9L4 C31  H21  SING N N 63 
9L4 C25  H22  SING N N 64 
9L4 C18  H23  SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9L4 SMILES           ACDLabs              12.01 "n3(C(C(=O)Nc1c(Cl)cc(C(O)=O)cc1)C2CCCCC2)c5cc(c(cc5nc3c4ccc(Cl)cc4)F)F"                                                                                                                          
9L4 InChI            InChI                1.03  "InChI=1S/C28H23Cl2F2N3O3/c29-18-9-6-16(7-10-18)26-33-23-13-20(31)21(32)14-24(23)35(26)25(15-4-2-1-3-5-15)27(36)34-22-11-8-17(28(37)38)12-19(22)30/h6-15,25H,1-5H2,(H,34,36)(H,37,38)/t25-/m0/s1" 
9L4 InChIKey         InChI                1.03  OLLRSJLKNAIFCJ-VWLOTQADSA-N                                                                                                                                                                       
9L4 SMILES_CANONICAL CACTVS               3.385 "OC(=O)c1ccc(NC(=O)[C@H](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(Cl)c1"                                                                                                                        
9L4 SMILES           CACTVS               3.385 "OC(=O)c1ccc(NC(=O)[CH](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(Cl)c1"                                                                                                                         
9L4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2[C@@H](C4CCCCC4)C(=O)Nc5ccc(cc5Cl)C(=O)O)F)F)Cl"                                                                                                                         
9L4 SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2C(C4CCCCC4)C(=O)Nc5ccc(cc5Cl)C(=O)O)F)F)Cl"                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9L4 "SYSTEMATIC NAME" ACDLabs              12.01 "3-chloro-4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid"            
9L4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-chloranyl-4-[[(2~{S})-2-[2-(4-chlorophenyl)-5,6-bis(fluoranyl)benzimidazol-1-yl]-2-cyclohexyl-ethanoyl]amino]benzoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9L4 "Create component" 2017-05-19 RCSB 
9L4 "Initial release"  2017-07-05 RCSB 
# 
