data_I64
# 
_chem_comp.id                                    I64 
_chem_comp.name                                  "benzyl [(2S)-1-({(2S)-1-[2-(3-amino-3-oxopropyl)-2-propanoylhydrazinyl]-4-methyl-1-oxopentan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]carbamate (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H39 N5 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        505.607 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I64 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7SHB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I64 N   N1  N 0 1 N N N N N N -9.038  -17.746 -18.083 2.952  -0.501 -0.045 N   I64 1  
I64 C   C1  C 0 1 Y N N N N N -6.267  -22.798 -20.703 9.946  0.949  0.589  C   I64 2  
I64 O   O1  O 0 1 N N N N N N -7.178  -19.051 -17.448 5.217  -0.094 -0.429 O   I64 3  
I64 C1  C2  C 0 1 Y N N N N N -5.912  -21.524 -21.134 9.585  -0.370 0.392  C1  I64 4  
I64 C10 C3  C 0 1 N N S N N N -9.675  -13.173 -18.050 -1.719 0.310  0.940  C10 I64 5  
I64 C11 C4  C 0 1 N N N N N N -11.116 -12.903 -17.753 -3.074 -0.094 0.419  C11 I64 6  
I64 C12 C5  C 0 1 N N N N N N -13.269 -12.808 -15.393 -6.342 0.817  0.089  C12 I64 7  
I64 C13 C6  C 0 1 N N N N N N -13.937 -13.964 -16.150 -6.175 0.862  -1.431 C13 I64 8  
I64 C14 C7  C 0 1 N N N N N N -14.673 -14.872 -15.178 -7.102 1.902  -2.007 C14 I64 9  
I64 C15 C8  C 0 1 N N N N N N -13.257 -10.859 -16.938 -5.824 -1.484 0.699  C15 I64 10 
I64 C16 C9  C 0 1 N N N N N N -12.472 -9.870  -17.775 -4.897 -2.524 1.275  C16 I64 11 
I64 C17 C10 C 0 1 N N N N N N -11.492 -9.089  -16.924 -5.569 -3.897 1.212  C17 I64 12 
I64 C18 C11 C 0 1 N N N N N N -11.086 -17.440 -19.292 1.481  -2.342 -0.699 C18 I64 13 
I64 C2  C12 C 0 1 Y N N N N N -5.804  -20.488 -20.214 8.401  -0.674 -0.254 C2  I64 14 
I64 C24 C13 C 0 1 N N N N N N -9.092  -12.003 -18.842 -1.674 1.829  1.118  C24 I64 15 
I64 C25 C14 C 0 1 N N N N N N -7.567  -12.052 -18.932 -0.345 2.228  1.763  C25 I64 16 
I64 C26 C15 C 0 1 N N N N N N -7.078  -13.120 -19.917 -0.246 3.753  1.827  C26 I64 17 
I64 C3  C16 C 0 1 Y N N N N N -6.055  -20.725 -18.853 7.578  0.343  -0.702 C3  I64 18 
I64 C30 C17 C 0 1 N N N N N N -6.962  -12.222 -17.537 -0.273 1.652  3.179  C30 I64 19 
I64 C35 C18 C 0 1 N N N N N N -10.869 -18.595 -20.274 2.451  -2.840 -1.772 C35 I64 20 
I64 C4  C19 C 0 1 Y N N N N N -6.402  -22.005 -18.426 7.939  1.663  -0.504 C4  I64 21 
I64 C5  C20 C 0 1 Y N N N N N -6.507  -23.036 -19.352 9.123  1.966  0.141  C5  I64 22 
I64 C6  C21 C 0 1 N N N N N N -5.918  -19.608 -17.827 6.287  0.013  -1.405 C6  I64 23 
I64 C60 C22 C 0 1 N N N N N N -12.092 -16.409 -19.814 1.810  -3.014 0.636  C60 I64 24 
I64 C7  C23 C 0 1 N N N N N N -7.824  -18.155 -18.379 3.989  -0.387 -0.898 C7  I64 25 
I64 C8  C24 C 0 1 N N S N N N -9.728  -16.829 -18.957 1.617  -0.825 -0.553 C8  I64 26 
I64 C9  C25 C 0 1 N N N N N N -9.870  -15.557 -18.195 0.575  -0.317 0.410  C9  I64 27 
I64 N1  N2  N 0 1 N N N N N N -9.602  -14.409 -18.804 -0.686 -0.101 -0.014 N1  I64 28 
I64 N2  N3  N 0 1 N N N N N N -11.392 -12.165 -16.686 -4.181 0.183  1.134  N2  I64 29 
I64 N3  N4  N 0 1 N N N N N N -12.644 -11.905 -16.361 -5.441 -0.193 0.650  N3  I64 30 
I64 N4  N5  N 0 1 N N N N N N -15.605 -15.710 -15.647 -7.127 2.118  -3.337 N4  I64 31 
I64 O1  O2  O 0 1 N N N N N N -7.237  -17.823 -19.396 3.816  -0.549 -2.089 O1  I64 32 
I64 O2  O3  O 0 1 N N N N N N -10.218 -15.619 -17.048 0.871  -0.104 1.566  O2  I64 33 
I64 O3  O4  O 0 1 N N N N N N -11.966 -13.359 -18.490 -3.167 -0.669 -0.645 O3  I64 34 
I64 O4  O5  O 0 1 N N N N N N -14.428 -14.840 -13.986 -7.824 2.543  -1.274 O4  I64 35 
I64 O5  O6  O 0 1 N N N N N N -14.460 -10.671 -16.827 -6.914 -1.810 0.279  O5  I64 36 
I64 H1  H1  H 0 1 N N N N N N -9.484  -18.072 -17.249 3.090  -0.371 0.907  H1  I64 37 
I64 H2  H2  H 0 1 N N N N N N -6.357  -23.603 -21.417 10.869 1.186  1.097  H2  I64 38 
I64 H3  H3  H 0 1 N N N N N N -5.721  -21.340 -22.181 10.227 -1.164 0.742  H3  I64 39 
I64 H4  H4  H 0 1 N N N N N N -9.121  -13.275 -17.105 -1.540 -0.173 1.900  H4  I64 40 
I64 H5  H5  H 0 1 N N N N N N -12.503 -13.207 -14.712 -6.100 1.793  0.511  H5  I64 41 
I64 H6  H6  H 0 1 N N N N N N -14.026 -12.260 -14.813 -7.373 0.561  0.334  H6  I64 42 
I64 H7  H7  H 0 1 N N N N N N -14.653 -13.556 -16.879 -5.144 1.119  -1.676 H7  I64 43 
I64 H8  H8  H 0 1 N N N N N N -13.167 -14.545 -16.678 -6.417 -0.113 -1.852 H8  I64 44 
I64 H9  H9  H 0 1 N N N N N N -11.917 -10.418 -18.551 -3.972 -2.545 0.699  H9  I64 45 
I64 H10 H10 H 0 1 N N N N N N -13.172 -9.168  -18.252 -4.674 -2.276 2.313  H10 I64 46 
I64 H11 H11 H 0 1 N N N N N N -10.938 -8.381  -17.558 -4.899 -4.649 1.629  H11 I64 47 
I64 H12 H12 H 0 1 N N N N N N -12.041 -8.535  -16.148 -6.494 -3.875 1.788  H12 I64 48 
I64 H13 H13 H 0 1 N Y N N N N -10.785 -9.784  -16.447 -5.793 -4.145 0.175  H13 I64 49 
I64 H14 H14 H 0 1 N N N N N N -11.498 -17.865 -18.365 0.460  -2.589 -0.989 H14 I64 50 
I64 H15 H15 H 0 1 N N N N N N -5.526  -19.499 -20.547 8.118  -1.704 -0.408 H15 I64 51 
I64 H16 H16 H 0 1 N N N N N N -9.385  -11.064 -18.350 -1.764 2.312  0.145  H16 I64 52 
I64 H17 H17 H 0 1 N N N N N N -9.505  -12.027 -19.861 -2.498 2.145  1.758  H17 I64 53 
I64 H18 H18 H 0 1 N N N N N N -7.231  -11.077 -19.316 0.480  1.835  1.169  H18 I64 54 
I64 H19 H19 H 0 1 N N N N N N -5.978  -13.116 -19.946 -1.071 4.146  2.422  H19 I64 55 
I64 H20 H20 H 0 1 N N N N N N -7.433  -14.109 -19.591 0.700  4.037  2.287  H20 I64 56 
I64 H21 H21 H 0 1 N N N N N N -7.472  -12.901 -20.920 -0.298 4.163  0.819  H21 I64 57 
I64 H22 H22 H 0 1 N N N N N N -7.344  -11.433 -16.872 -1.098 2.045  3.773  H22 I64 58 
I64 H23 H23 H 0 1 N N N N N N -7.240  -13.207 -17.134 -0.343 0.565  3.133  H23 I64 59 
I64 H24 H24 H 0 1 N N N N N N -5.866  -12.148 -17.601 0.674  1.936  3.639  H24 I64 60 
I64 H25 H25 H 0 1 N N N N N N -10.141 -19.304 -19.852 3.472  -2.593 -1.483 H25 I64 61 
I64 H26 H26 H 0 1 N N N N N N -11.824 -19.112 -20.449 2.355  -3.921 -1.876 H26 I64 62 
I64 H27 H27 H 0 1 N N N N N N -10.486 -18.199 -21.226 2.217  -2.362 -2.723 H27 I64 63 
I64 H28 H28 H 0 1 N N N N N N -6.589  -22.195 -17.379 7.296  2.457  -0.854 H28 I64 64 
I64 H29 H29 H 0 1 N N N N N N -6.776  -24.028 -19.022 9.404  2.997  0.299  H29 I64 65 
I64 H30 H30 H 0 1 N N N N N N -5.428  -20.013 -16.929 6.393  -0.935 -1.933 H30 I64 66 
I64 H31 H31 H 0 1 N N N N N N -5.295  -18.810 -18.257 6.050  0.802  -2.119 H31 I64 67 
I64 H32 H32 H 0 1 N N N N N N -12.211 -15.604 -19.074 2.827  -2.757 0.931  H32 I64 68 
I64 H33 H33 H 0 1 N N N N N N -11.725 -15.985 -20.760 1.112  -2.667 1.398  H33 I64 69 
I64 H34 H34 H 0 1 N N N N N N -13.063 -16.897 -19.983 1.724  -4.095 0.530  H34 I64 70 
I64 H35 H35 H 0 1 N N N N N N -9.157  -16.659 -19.882 1.474  -0.353 -1.526 H35 I64 71 
I64 H36 H36 H 0 1 N N N N N N -9.352  -14.397 -19.772 -0.909 -0.217 -0.951 H36 I64 72 
I64 H37 H37 H 0 1 N N N N N N -10.647 -11.804 -16.125 -4.107 0.643  1.985  H37 I64 73 
I64 H38 H38 H 0 1 N N N N N N -16.100 -16.310 -15.018 -6.549 1.605  -3.923 H38 I64 74 
I64 H39 H39 H 0 1 N N N N N N -15.806 -15.736 -16.626 -7.724 2.787  -3.708 H39 I64 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I64 C1  C   DOUB Y N 1  
I64 C1  C2  SING Y N 2  
I64 C   C5  SING Y N 3  
I64 C35 C18 SING N N 4  
I64 C2  C3  DOUB Y N 5  
I64 C26 C25 SING N N 6  
I64 C60 C18 SING N N 7  
I64 O1  C7  DOUB N N 8  
I64 C5  C4  DOUB Y N 9  
I64 C18 C8  SING N N 10 
I64 C8  C9  SING N N 11 
I64 C8  N   SING N N 12 
I64 C25 C24 SING N N 13 
I64 C25 C30 SING N N 14 
I64 C3  C4  SING Y N 15 
I64 C3  C6  SING N N 16 
I64 C24 C10 SING N N 17 
I64 N1  C9  SING N N 18 
I64 N1  C10 SING N N 19 
I64 O3  C11 DOUB N N 20 
I64 C7  N   SING N N 21 
I64 C7  O   SING N N 22 
I64 C9  O2  DOUB N N 23 
I64 C10 C11 SING N N 24 
I64 C6  O   SING N N 25 
I64 C16 C15 SING N N 26 
I64 C16 C17 SING N N 27 
I64 C11 N2  SING N N 28 
I64 C15 O5  DOUB N N 29 
I64 C15 N3  SING N N 30 
I64 N2  N3  SING N N 31 
I64 N3  C12 SING N N 32 
I64 C13 C12 SING N N 33 
I64 C13 C14 SING N N 34 
I64 N4  C14 SING N N 35 
I64 C14 O4  DOUB N N 36 
I64 N   H1  SING N N 37 
I64 C   H2  SING N N 38 
I64 C1  H3  SING N N 39 
I64 C10 H4  SING N N 40 
I64 C12 H5  SING N N 41 
I64 C12 H6  SING N N 42 
I64 C13 H7  SING N N 43 
I64 C13 H8  SING N N 44 
I64 C16 H9  SING N N 45 
I64 C16 H10 SING N N 46 
I64 C17 H11 SING N N 47 
I64 C17 H12 SING N N 48 
I64 C17 H13 SING N N 49 
I64 C18 H14 SING N N 50 
I64 C2  H15 SING N N 51 
I64 C24 H16 SING N N 52 
I64 C24 H17 SING N N 53 
I64 C25 H18 SING N N 54 
I64 C26 H19 SING N N 55 
I64 C26 H20 SING N N 56 
I64 C26 H21 SING N N 57 
I64 C30 H22 SING N N 58 
I64 C30 H23 SING N N 59 
I64 C30 H24 SING N N 60 
I64 C35 H25 SING N N 61 
I64 C35 H26 SING N N 62 
I64 C35 H27 SING N N 63 
I64 C4  H28 SING N N 64 
I64 C5  H29 SING N N 65 
I64 C6  H30 SING N N 66 
I64 C6  H31 SING N N 67 
I64 C60 H32 SING N N 68 
I64 C60 H33 SING N N 69 
I64 C60 H34 SING N N 70 
I64 C8  H35 SING N N 71 
I64 N1  H36 SING N N 72 
I64 N2  H37 SING N N 73 
I64 N4  H38 SING N N 74 
I64 N4  H39 SING N N 75 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I64 SMILES           ACDLabs              12.01 "CCC(=O)N(CCC(N)=O)NC(=O)C(CC(C)C)NC(=O)C(NC(=O)OCc1ccccc1)C(C)C"                                                                                                                                                    
I64 InChI            InChI                1.03  "InChI=1S/C25H39N5O6/c1-6-21(32)30(13-12-20(26)31)29-23(33)19(14-16(2)3)27-24(34)22(17(4)5)28-25(35)36-15-18-10-8-7-9-11-18/h7-11,16-17,19,22H,6,12-15H2,1-5H3,(H2,26,31)(H,27,34)(H,28,35)(H,29,33)/t19-,22-/m0/s1" 
I64 InChIKey         InChI                1.03  KUUJMWBAIGJHJP-UGKGYDQZSA-N                                                                                                                                                                                          
I64 SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N(CCC(N)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](NC(=O)OCc1ccccc1)C(C)C"                                                                                                                                           
I64 SMILES           CACTVS               3.385 "CCC(=O)N(CCC(N)=O)NC(=O)[CH](CC(C)C)NC(=O)[CH](NC(=O)OCc1ccccc1)C(C)C"                                                                                                                                              
I64 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)N)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C(C)C)NC(=O)OCc1ccccc1"                                                                                                                                            
I64 SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)N)NC(=O)C(CC(C)C)NC(=O)C(C(C)C)NC(=O)OCc1ccccc1"                                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
I64 "SYSTEMATIC NAME" ACDLabs              12.01 "benzyl [(2S)-1-({(2S)-1-[2-(3-amino-3-oxopropyl)-2-propanoylhydrazinyl]-4-methyl-1-oxopentan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]carbamate (non-preferred name)"                                  
I64 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-1-[2-(3-azanyl-3-oxidanylidene-propyl)-2-propanoyl-hydrazinyl]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I64 "Create component" 2021-10-13 RCSB 
I64 "Initial release"  2024-07-10 RCSB 
I64 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            I64 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C17 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
