data_7C5
# 
_chem_comp.id                                    7C5 
_chem_comp.name                                  "5'-O-(2-amino-4-oxo-1,4-dihydropteridine-6-carbonyl)adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H16 N10 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-10-03 
_chem_comp.pdbx_modified_date                    2017-01-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        456.372 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7C5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5TH5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7C5 N1  N1  N 0 1 N N N 9.585  4.703  6.282 -8.153 2.735  -0.671 N1  7C5 1  
7C5 N3  N2  N 0 1 Y N N -1.644 8.130  6.735 5.667  0.703  -1.148 N3  7C5 2  
7C5 C4  C1  C 0 1 N N N 6.795  3.414  4.609 -4.842 1.596  -1.263 C4  7C5 3  
7C5 C5  C2  C 0 1 Y N N 4.381  3.193  7.795 -4.660 -1.395 1.625  C5  7C5 4  
7C5 C6  C3  C 0 1 Y N N 3.918  2.798  6.549 -3.557 -1.144 0.800  C6  7C5 5  
7C5 C7  C4  C 0 1 N N N 0.446  2.179  7.310 -0.084 -2.530 0.368  C7  7C5 6  
7C5 C8  C5  C 0 1 N N R -1.637 4.979  7.160 2.882  -0.751 -0.616 C8  7C5 7  
7C5 C10 C6  C 0 1 N N S -1.719 2.849  8.137 2.217  -3.064 -0.491 C10 7C5 8  
7C5 C13 C7  C 0 1 Y N N -1.730 9.409  6.358 6.765  1.428  -1.183 C13 7C5 9  
7C5 C15 C8  C 0 1 Y N N -2.554 5.241  4.856 3.072  0.967  1.222  C15 7C5 10 
7C5 C17 C9  C 0 1 N N N 2.631  2.314  6.400 -2.323 -1.945 0.954  C17 7C5 11 
7C5 C1  C10 C 0 1 N N N 8.419  4.260  6.077 -7.007 2.003  -0.539 C1  7C5 12 
7C5 C2  C11 C 0 1 Y N N 6.385  3.721  6.922 -5.832 0.268  0.579  C2  7C5 13 
7C5 C3  C12 C 0 1 Y N N 5.926  3.317  5.664 -4.721 0.522  -0.253 C3  7C5 14 
7C5 O1  O1  O 0 1 N N N 6.448  3.081  3.503 -3.916 1.856  -2.013 O1  7C5 15 
7C5 C9  C13 C 0 1 N N R -2.557 3.847  7.472 3.398  -2.130 -0.130 C9  7C5 16 
7C5 O2  O2  O 0 1 N N N -1.973 2.870  9.467 2.465  -3.726 -1.733 O2  7C5 17 
7C5 O3  O3  O 0 1 N N N -3.525 4.263  8.323 4.582  -2.509 -0.835 O3  7C5 18 
7C5 C11 C14 C 0 1 Y N N -2.028 7.133  5.913 4.757  0.897  -0.199 C11 7C5 19 
7C5 C12 C15 C 0 1 Y N N -2.522 7.449  4.649 4.982  1.890  0.770  C12 7C5 20 
7C5 C14 C16 C 0 1 Y N N -2.600 8.799  4.283 6.169  2.637  0.691  C14 7C5 21 
7C5 N2  N3  N 0 1 Y N N -2.062 5.732  6.009 3.546  0.333  0.112  N2  7C5 22 
7C5 N4  N4  N 0 1 Y N N -2.202 9.746  5.148 7.020  2.371  -0.294 N4  7C5 23 
7C5 N5  N5  N 0 1 N N N -3.103 9.174  2.995 6.446  3.628  1.617  N5  7C5 24 
7C5 N6  N6  N 0 1 Y N N -2.831 6.274  4.041 3.917  1.880  1.607  N6  7C5 25 
7C5 N7  N7  N 0 1 N N N 8.065  3.894  4.819 -5.996 2.273  -1.337 N7  7C5 26 
7C5 N8  N8  N 0 1 N N N 7.592  4.165  7.068 -6.965 1.031  0.410  N8  7C5 27 
7C5 N9  N9  N 0 1 Y N N 5.592  3.644  7.953 -5.765 -0.687 1.497  N9  7C5 28 
7C5 N10 N10 N 0 1 Y N N 4.716  2.868  5.521 -3.616 -0.189 -0.122 N10 7C5 29 
7C5 C16 C17 C 0 1 N N R -0.322 3.270  7.897 1.010  -2.114 -0.617 C16 7C5 30 
7C5 O4  O4  O 0 1 N N N -0.382 4.386  6.970 1.473  -0.790 -0.304 O4  7C5 31 
7C5 O5  O5  O 0 1 N N N 1.819  2.191  7.482 -1.261 -1.705 0.161  O5  7C5 32 
7C5 O6  O6  O 0 1 N N N 2.225  1.986  5.287 -2.267 -2.818 1.796  O6  7C5 33 
7C5 H1  H1  H 0 1 N N N 10.231 4.780  5.523 -8.912 2.556  -0.094 H1  7C5 34 
7C5 H2  H2  H 0 1 N N N 9.861  4.977  7.203 -8.206 3.438  -1.338 H2  7C5 35 
7C5 H3  H3  H 0 1 N N N 3.725  3.125  8.650 -4.605 -2.173 2.372  H3  7C5 36 
7C5 H4  H4  H 0 1 N N N 0.251  2.186  6.227 -0.340 -3.577 0.206  H4  7C5 37 
7C5 H5  H5  H 0 1 N N N 0.069  1.241  7.745 0.277  -2.398 1.388  H5  7C5 38 
7C5 H6  H6  H 0 1 N N N -1.601 5.647  8.033 3.035  -0.641 -1.689 H6  7C5 39 
7C5 H7  H7  H 0 1 N N N -1.893 1.854  7.701 2.051  -3.792 0.303  H7  7C5 40 
7C5 H8  H8  H 0 1 N N N -1.414 10.185 7.039 7.484  1.245  -1.967 H8  7C5 41 
7C5 H9  H9  H 0 1 N N N -2.701 4.196  4.625 2.135  0.745  1.710  H9  7C5 42 
7C5 H10 H10 H 0 1 N N N -2.975 3.436  6.541 3.573  -2.123 0.946  H10 7C5 43 
7C5 H11 H11 H 0 1 N N N -1.431 2.223  9.904 3.233  -4.313 -1.719 H11 7C5 44 
7C5 H12 H12 H 0 1 N N N -4.108 3.539  8.519 4.943  -3.365 -0.567 H12 7C5 45 
7C5 H13 H13 H 0 1 N N N -3.088 10.170 2.908 5.816  3.812  2.332  H13 7C5 46 
7C5 H14 H14 H 0 1 N N N -2.530 8.769  2.283 7.269  4.137  1.552  H14 7C5 47 
7C5 H16 H16 H 0 1 N N N 0.138  3.589  8.844 0.622  -2.142 -1.635 H16 7C5 48 
7C5 H15 H15 H 0 1 N N N 7.896  4.444  7.979 -7.740 0.873  0.972  H15 7C5 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7C5 N5  C14 SING N N 1  
7C5 O1  C4  DOUB N N 2  
7C5 N6  C12 SING Y N 3  
7C5 N6  C15 DOUB Y N 4  
7C5 C14 C12 DOUB Y N 5  
7C5 C14 N4  SING Y N 6  
7C5 C4  N7  SING N N 7  
7C5 C4  C3  SING N N 8  
7C5 C12 C11 SING Y N 9  
7C5 N7  C1  DOUB N N 10 
7C5 C15 N2  SING Y N 11 
7C5 N4  C13 DOUB Y N 12 
7C5 O6  C17 DOUB N N 13 
7C5 N10 C3  SING Y N 14 
7C5 N10 C6  DOUB Y N 15 
7C5 C3  C2  DOUB Y N 16 
7C5 C11 N2  SING Y N 17 
7C5 C11 N3  DOUB Y N 18 
7C5 N2  C8  SING N N 19 
7C5 C1  N1  SING N N 20 
7C5 C1  N8  SING N N 21 
7C5 C13 N3  SING Y N 22 
7C5 C17 C6  SING N N 23 
7C5 C17 O5  SING N N 24 
7C5 C6  C5  SING Y N 25 
7C5 C2  N8  SING N N 26 
7C5 C2  N9  SING Y N 27 
7C5 O4  C8  SING N N 28 
7C5 O4  C16 SING N N 29 
7C5 C8  C9  SING N N 30 
7C5 C7  O5  SING N N 31 
7C5 C7  C16 SING N N 32 
7C5 C9  C10 SING N N 33 
7C5 C9  O3  SING N N 34 
7C5 C5  N9  DOUB Y N 35 
7C5 C16 C10 SING N N 36 
7C5 C10 O2  SING N N 37 
7C5 N1  H1  SING N N 38 
7C5 N1  H2  SING N N 39 
7C5 C5  H3  SING N N 40 
7C5 C7  H4  SING N N 41 
7C5 C7  H5  SING N N 42 
7C5 C8  H6  SING N N 43 
7C5 C10 H7  SING N N 44 
7C5 C13 H8  SING N N 45 
7C5 C15 H9  SING N N 46 
7C5 C9  H10 SING N N 47 
7C5 O2  H11 SING N N 48 
7C5 O3  H12 SING N N 49 
7C5 N5  H13 SING N N 50 
7C5 N5  H14 SING N N 51 
7C5 C16 H16 SING N N 52 
7C5 N8  H15 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7C5 SMILES           ACDLabs              12.01 "NC=4Nc5ncc(C(OCC3C(O)C(C(n2cnc1c2ncnc1N)O3)O)=O)nc5C(N=4)=O" 
7C5 InChI            InChI                1.03  
"InChI=1S/C17H16N10O6/c18-11-7-13(22-3-21-11)27(4-23-7)15-10(29)9(28)6(33-15)2-32-16(31)5-1-20-12-8(24-5)14(30)26-17(19)25-12/h1,3-4,6,9-10,15,28-29H,2H2,(H2,18,21,22)(H3,19,20,25,26,30)/t6-,9-,10-,15-/m1/s1" 
7C5 InChIKey         InChI                1.03  INIBCQZJBGQGDM-NCEGKOTBSA-N 
7C5 SMILES_CANONICAL CACTVS               3.385 "NC1=NC(=O)c2nc(cnc2N1)C(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45" 
7C5 SMILES           CACTVS               3.385 "NC1=NC(=O)c2nc(cnc2N1)C(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45" 
7C5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1c(nc2c(n1)NC(=NC2=O)N)C(=O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O" 
7C5 SMILES           "OpenEye OEToolkits" 2.0.6 "c1c(nc2c(n1)NC(=NC2=O)N)C(=O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7C5 "SYSTEMATIC NAME" ACDLabs              12.01 "5'-O-(2-amino-4-oxo-1,4-dihydropteridine-6-carbonyl)adenosine"                                                                               
7C5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 2-azanyl-4-oxidanylidene-1~{H}-pteridine-6-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7C5 "Create component" 2016-10-03 RCSB 
7C5 "Initial release"  2017-01-18 RCSB 
# 
