data_3C6
# 
_chem_comp.id                                    3C6 
_chem_comp.name                                  "N~2~-[4-(pyridin-3-yl)benzoyl]-L-lysinamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H22 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-07-25 
_chem_comp.pdbx_modified_date                    2015-05-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        326.393 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3C6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4U58 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3C6 CAA C1  C 0 1 Y N N 0.622  31.229 13.240 -5.578 0.157  0.757  CAA 3C6 1  
3C6 CAB C2  C 0 1 Y N N 0.069  29.996 13.568 -6.879 -0.263 0.542  CAB 3C6 2  
3C6 CAC C3  C 0 1 Y N N -1.192 29.707 13.062 -7.140 -1.171 -0.468 CAC 3C6 3  
3C6 NAD N1  N 0 1 Y N N -1.848 30.563 12.297 -6.168 -1.642 -1.226 NAD 3C6 4  
3C6 CAE C4  C 0 1 Y N N -1.339 31.733 11.972 -4.915 -1.273 -1.059 CAE 3C6 5  
3C6 CAF C5  C 0 1 Y N N -0.093 32.112 12.441 -4.571 -0.356 -0.067 CAF 3C6 6  
3C6 CAG C6  C 0 1 Y N N 0.506  33.463 12.073 -3.160 0.059  0.119  CAG 3C6 7  
3C6 CAH C7  C 0 1 Y N N 0.164  34.087 10.876 -2.829 0.973  1.120  CAH 3C6 8  
3C6 CAI C8  C 0 1 Y N N 0.727  35.315 10.551 -1.519 1.360  1.294  CAI 3C6 9  
3C6 CAL C9  C 0 1 Y N N 1.402  34.065 12.942 -2.164 -0.468 -0.702 CAL 3C6 10 
3C6 CAK C10 C 0 1 Y N N 1.960  35.295 12.615 -0.854 -0.084 -0.530 CAK 3C6 11 
3C6 CAJ C11 C 0 1 Y N N 1.619  35.922 11.431 -0.522 0.836  0.468  CAJ 3C6 12 
3C6 CAM C12 C 0 1 N N N 2.268  37.261 11.090 0.884  1.251  0.653  CAM 3C6 13 
3C6 OAX O1  O 0 1 N N N 2.242  37.674 9.981  1.173  2.047  1.525  OAX 3C6 14 
3C6 N   N2  N 0 1 N N N 2.947  38.008 12.125 1.846  0.745  -0.144 N   3C6 15 
3C6 CA  C13 C 0 1 N N S 3.578  39.264 11.797 3.240  1.156  0.040  CA  3C6 16 
3C6 C   C14 C 0 1 N N N 5.084  39.035 11.648 3.490  2.437  -0.714 C   3C6 17 
3C6 O   O2  O 0 1 N N N 5.732  39.785 10.995 2.592  2.956  -1.343 O   3C6 18 
3C6 NAW N3  N 0 1 N N N 5.726  37.897 12.285 4.712  3.006  -0.689 NAW 3C6 19 
3C6 CB  C15 C 0 1 N N N 3.311  40.258 12.915 4.169  0.062  -0.492 CB  3C6 20 
3C6 CG  C16 C 0 1 N N N 1.818  40.560 13.047 4.004  -1.202 0.355  CG  3C6 21 
3C6 CD  C17 C 0 1 N N N 1.274  41.436 11.921 4.933  -2.296 -0.177 CD  3C6 22 
3C6 CE  C18 C 0 1 N N N 0.829  42.813 12.419 4.768  -3.559 0.669  CE  3C6 23 
3C6 NZ  N4  N 0 1 N N N 0.882  43.776 11.327 5.660  -4.610 0.159  NZ  3C6 24 
3C6 H1  H1  H 0 1 N N N 1.602  31.499 13.605 -5.346 0.866  1.538  H1  3C6 25 
3C6 H2  H2  H 0 1 N N N 0.599  29.291 14.191 -7.683 0.116  1.156  H2  3C6 26 
3C6 H3  H3  H 0 1 N N N -1.649 28.758 13.300 -8.154 -1.500 -0.638 H3  3C6 27 
3C6 H4  H4  H 0 1 N N N -1.898 32.402 11.335 -4.147 -1.681 -1.700 H4  3C6 28 
3C6 H5  H5  H 0 1 N N N -0.537 33.618 10.202 -3.601 1.378  1.758  H5  3C6 29 
3C6 H6  H6  H 0 1 N N N 0.473  35.797 9.619  -1.263 2.068  2.068  H6  3C6 30 
3C6 H7  H7  H 0 1 N N N 1.666  33.580 13.870 -2.421 -1.179 -1.474 H7  3C6 31 
3C6 H8  H8  H 0 1 N N N 2.663  35.763 13.288 -0.082 -0.493 -1.166 H8  3C6 32 
3C6 H9  H9  H 0 1 N N N 2.979  37.657 13.061 1.616  0.110  -0.839 H9  3C6 33 
3C6 H10 H10 H 0 1 N N N 3.177  39.660 10.853 3.436  1.315  1.100  H10 3C6 34 
3C6 H11 H11 H 0 1 N N N 6.709  37.749 12.172 5.430  2.592  -0.186 H11 3C6 35 
3C6 H12 H12 H 0 1 N N N 5.185  37.262 12.836 4.872  3.831  -1.174 H12 3C6 36 
3C6 H13 H13 H 0 1 N N N 3.676  39.837 13.863 3.914  -0.159 -1.528 H13 3C6 37 
3C6 H14 H14 H 0 1 N N N 3.848  41.193 12.698 5.202  0.405  -0.437 H14 3C6 38 
3C6 H15 H15 H 0 1 N N N 1.650  41.077 14.003 4.259  -0.981 1.391  H15 3C6 39 
3C6 H16 H16 H 0 1 N N N 1.268  39.607 13.044 2.971  -1.544 0.300  H16 3C6 40 
3C6 H17 H17 H 0 1 N N N 0.411  40.929 11.464 4.678  -2.516 -1.213 H17 3C6 41 
3C6 H18 H18 H 0 1 N N N 2.062  41.571 11.166 5.966  -1.953 -0.122 H18 3C6 42 
3C6 H19 H19 H 0 1 N N N 1.498  43.142 13.228 5.023  -3.338 1.706  H19 3C6 43 
3C6 H20 H20 H 0 1 N N N -0.201 42.748 12.798 3.735  -3.902 0.615  H20 3C6 44 
3C6 H21 H21 H 0 1 N N N 0.590  44.673 11.659 6.618  -4.293 0.140  H21 3C6 45 
3C6 H22 H22 H 0 1 N N N 1.818  43.837 10.982 5.570  -5.456 0.702  H22 3C6 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3C6 OAX CAM DOUB N N 1  
3C6 CAI CAH DOUB Y N 2  
3C6 CAI CAJ SING Y N 3  
3C6 CAH CAG SING Y N 4  
3C6 O   C   DOUB N N 5  
3C6 CAM CAJ SING N N 6  
3C6 CAM N   SING N N 7  
3C6 NZ  CE  SING N N 8  
3C6 CAJ CAK DOUB Y N 9  
3C6 C   CA  SING N N 10 
3C6 C   NAW SING N N 11 
3C6 CA  N   SING N N 12 
3C6 CA  CB  SING N N 13 
3C6 CD  CE  SING N N 14 
3C6 CD  CG  SING N N 15 
3C6 CAE NAD DOUB Y N 16 
3C6 CAE CAF SING Y N 17 
3C6 CAG CAF SING N N 18 
3C6 CAG CAL DOUB Y N 19 
3C6 NAD CAC SING Y N 20 
3C6 CAF CAA DOUB Y N 21 
3C6 CAK CAL SING Y N 22 
3C6 CB  CG  SING N N 23 
3C6 CAC CAB DOUB Y N 24 
3C6 CAA CAB SING Y N 25 
3C6 CAA H1  SING N N 26 
3C6 CAB H2  SING N N 27 
3C6 CAC H3  SING N N 28 
3C6 CAE H4  SING N N 29 
3C6 CAH H5  SING N N 30 
3C6 CAI H6  SING N N 31 
3C6 CAL H7  SING N N 32 
3C6 CAK H8  SING N N 33 
3C6 N   H9  SING N N 34 
3C6 CA  H10 SING N N 35 
3C6 NAW H11 SING N N 36 
3C6 NAW H12 SING N N 37 
3C6 CB  H13 SING N N 38 
3C6 CB  H14 SING N N 39 
3C6 CG  H15 SING N N 40 
3C6 CG  H16 SING N N 41 
3C6 CD  H17 SING N N 42 
3C6 CD  H18 SING N N 43 
3C6 CE  H19 SING N N 44 
3C6 CE  H20 SING N N 45 
3C6 NZ  H21 SING N N 46 
3C6 NZ  H22 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3C6 SMILES           ACDLabs              12.01 "O=C(N)C(NC(=O)c2ccc(c1cccnc1)cc2)CCCCN"                                                                                                                    
3C6 InChI            InChI                1.03  "InChI=1S/C18H22N4O2/c19-10-2-1-5-16(17(20)23)22-18(24)14-8-6-13(7-9-14)15-4-3-11-21-12-15/h3-4,6-9,11-12,16H,1-2,5,10,19H2,(H2,20,23)(H,22,24)/t16-/m0/s1" 
3C6 InChIKey         InChI                1.03  VJTHQFAZPHZKKW-INIZCTEOSA-N                                                                                                                                 
3C6 SMILES_CANONICAL CACTVS               3.385 "NCCCC[C@H](NC(=O)c1ccc(cc1)c2cccnc2)C(N)=O"                                                                                                                
3C6 SMILES           CACTVS               3.385 "NCCCC[CH](NC(=O)c1ccc(cc1)c2cccnc2)C(N)=O"                                                                                                                 
3C6 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(cnc1)c2ccc(cc2)C(=O)N[C@@H](CCCCN)C(=O)N"                                                                                                             
3C6 SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(cnc1)c2ccc(cc2)C(=O)NC(CCCCN)C(=O)N"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3C6 "SYSTEMATIC NAME" ACDLabs              12.01 "N~2~-[4-(pyridin-3-yl)benzoyl]-L-lysinamide"                                  
3C6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "N-[(2S)-1,6-bis(azanyl)-1-oxidanylidene-hexan-2-yl]-4-pyridin-3-yl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3C6 "Other modification" 2014-07-25 EBI  
3C6 "Modify descriptor"  2014-09-05 RCSB 
3C6 "Initial release"    2015-05-13 RCSB 
# 
