data_D96
#

_chem_comp.id                                   D96
_chem_comp.name                                 "N-{4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}-D-glutamic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H19 N5 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-15
_chem_comp.pdbx_modified_date                   2019-06-14
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       413.384
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    D96
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OJU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D96  N1   N1   N  0  1  N  N  N  213.839  -130.845  102.061   6.207   0.647  -1.304  N1   D96   1  
D96  C1   C1   C  0  1  Y  N  N  215.041  -130.702  102.687   5.275  -0.317  -1.317  C1   D96   2  
D96  C2   C2   C  0  1  Y  N  N  216.234  -131.319  102.322   4.601  -0.632  -0.129  C2   D96   3  
D96  C3   C3   C  0  1  N  N  N  216.228  -132.213  101.166   4.922   0.075   1.051  C3   D96   4  
D96  N2   N2   N  0  1  N  N  N  214.976  -132.281  100.620   5.873   1.034   0.983  N2   D96   5  
D96  C4   C4   C  0  1  N  N  N  213.829  -131.634  101.035   6.497   1.298  -0.200  C4   D96   6  
D96  C5   C5   C  0  1  Y  N  N  217.213  -130.893  103.238   3.663  -1.704  -0.460  C5   D96   7  
D96  C6   C6   C  0  1  Y  N  N  216.594  -130.025  104.133   3.819  -1.961  -1.770  C6   D96   8  
D96  N3   N3   N  0  1  Y  N  N  215.267  -129.920  103.783   4.782  -1.135  -2.291  N3   D96   9  
D96  O1   O1   O  0  1  N  N  N  217.159  -132.855  100.679   4.356  -0.172   2.102  O1   D96  10  
D96  N4   N4   N  0  1  N  N  N  212.610  -131.881  100.270   7.458   2.276  -0.240  N4   D96  11  
D96  C7   C7   C  0  1  N  N  N  218.660  -131.288  103.255   2.708  -2.387   0.484  C7   D96  12  
D96  C8   C8   C  0  1  Y  N  N  219.323  -130.823  101.995   1.439  -1.581   0.585  C8   D96  13  
D96  C9   C9   C  0  1  Y  N  N  218.956  -129.604  101.442   0.393  -1.830  -0.287  C9   D96  14  
D96  C10  C10  C  0  1  Y  N  N  219.562  -129.163  100.275  -0.771  -1.096  -0.199  C10  D96  15  
D96  C11  C11  C  0  1  Y  N  N  220.537  -129.940   99.666  -0.894  -0.101   0.771  C11  D96  16  
D96  C12  C12  C  0  1  Y  N  N  220.907  -131.161  100.214   0.164   0.146   1.647  C12  D96  17  
D96  C13  C13  C  0  1  Y  N  N  220.298  -131.605  101.383   1.322  -0.599   1.553  C13  D96  18  
D96  C14  C14  C  0  1  N  N  N  221.176  -129.448   98.406  -2.137   0.694   0.867  C14  D96  19  
D96  O2   O2   O  0  1  N  N  N  220.794  -128.466   97.773  -2.240   1.563   1.710  O2   D96  20  
D96  N5   N5   N  0  1  N  N  N  222.208  -130.211   98.042  -3.158   0.453   0.020  N5   D96  21  
D96  C15  C15  C  0  1  N  N  R  223.043  -130.019   96.855  -4.390   1.240   0.115  C15  D96  22  
D96  C16  C16  C  0  1  N  N  N  224.213  -130.963   96.900  -5.556   0.433  -0.458  C16  D96  23  
D96  C17  C17  C  0  1  N  N  N  223.508  -128.591   96.752  -4.231   2.519  -0.668  C17  D96  24  
D96  O3   O3   O  0  1  N  N  N  223.801  -127.824   97.666  -5.240   3.401  -0.723  O3   D96  25  
D96  O4   O4   O  0  1  N  N  N  223.545  -128.233   95.443  -3.195   2.748  -1.245  O4   D96  26  
D96  C18  C18  C  0  1  N  N  N  223.733  -132.344   97.243  -5.797  -0.803   0.411  C18  D96  27  
D96  C19  C19  C  0  1  N  N  N  223.320  -133.075   95.998  -6.946  -1.598  -0.154  C19  D96  28  
D96  O5   O5   O  0  1  N  N  N  223.308  -132.644   94.848  -7.514  -1.215  -1.149  O5   D96  29  
D96  O6   O6   O  0  1  N  N  N  222.939  -134.338   96.320  -7.338  -2.731   0.450  O6   D96  30  
D96  H1   H1   H  0  1  N  N  N  214.879  -132.873   99.820   6.112   1.535   1.778  H1   D96  31  
D96  H2   H2   H  0  1  N  N  N  217.073  -129.521  104.960   3.269  -2.705  -2.327  H2   D96  32  
D96  H3   H3   H  0  1  N  N  N  214.582  -129.363  104.253   5.071  -1.133  -3.217  H3   D96  33  
D96  H4   H4   H  0  1  N  N  N  211.755  -131.436  100.535   7.684   2.767   0.566  H4   D96  34  
D96  H5   H5   H  0  1  N  N  N  212.631  -132.495   99.481   7.912   2.477  -1.073  H5   D96  35  
D96  H6   H6   H  0  1  N  N  N  218.740  -132.383  103.328   2.477  -3.384   0.108  H6   D96  36  
D96  H7   H7   H  0  1  N  N  N  219.155  -130.826  104.121   3.167  -2.468   1.469  H7   D96  37  
D96  H8   H8   H  0  1  N  N  N  218.199  -129.000  101.920   0.490  -2.601  -1.037  H8   D96  38  
D96  H9   H9   H  0  1  N  N  N  219.275  -128.216   99.841  -1.587  -1.292  -0.880  H9   D96  39  
D96  H10  H10  H  0  1  N  N  N  221.664  -131.763   99.735   0.076   0.915   2.400  H10  D96  40  
D96  H11  H11  H  0  1  N  N  N  220.581  -132.554  101.814   2.141  -0.410   2.230  H11  D96  41  
D96  H12  H12  H  0  1  N  N  N  222.432  -130.985   98.634  -3.076  -0.241  -0.653  H12  D96  42  
D96  H13  H13  H  0  1  N  N  N  222.446  -130.252   95.961  -4.590   1.477   1.160  H13  D96  43  
D96  H14  H14  H  0  1  N  N  N  224.707  -130.981   95.917  -6.454   1.050  -0.470  H14  D96  44  
D96  H15  H15  H  0  1  N  N  N  224.928  -130.624   97.664  -5.317   0.121  -1.475  H15  D96  45  
D96  H16  H16  H  0  1  N  N  N  224.045  -126.980   97.305  -5.091   4.207  -1.237  H16  D96  46  
D96  H17  H17  H  0  1  N  N  N  222.872  -132.271   97.923  -4.898  -1.420   0.422  H17  D96  47  
D96  H18  H18  H  0  1  N  N  N  224.545  -132.898   97.737  -6.036  -0.491   1.428  H18  D96  48  
D96  H19  H19  H  0  1  N  N  N  222.676  -134.800   95.533  -8.080  -3.207   0.051  H19  D96  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D96  O5   C19  DOUB  N  N   1  
D96  O4   C17  DOUB  N  N   2  
D96  C19  O6   SING  N  N   3  
D96  C19  C18  SING  N  N   4  
D96  C17  C15  SING  N  N   5  
D96  C17  O3   SING  N  N   6  
D96  C15  C16  SING  N  N   7  
D96  C15  N5   SING  N  N   8  
D96  C16  C18  SING  N  N   9  
D96  O2   C14  DOUB  N  N  10  
D96  N5   C14  SING  N  N  11  
D96  C14  C11  SING  N  N  12  
D96  C11  C12  DOUB  Y  N  13  
D96  C11  C10  SING  Y  N  14  
D96  C12  C13  SING  Y  N  15  
D96  N4   C4   SING  N  N  16  
D96  C10  C9   DOUB  Y  N  17  
D96  N2   C4   SING  N  N  18  
D96  N2   C3   SING  N  N  19  
D96  O1   C3   DOUB  N  N  20  
D96  C4   N1   DOUB  N  N  21  
D96  C3   C2   SING  N  N  22  
D96  C13  C8   DOUB  Y  N  23  
D96  C9   C8   SING  Y  N  24  
D96  C8   C7   SING  N  N  25  
D96  N1   C1   SING  N  N  26  
D96  C2   C1   DOUB  Y  N  27  
D96  C2   C5   SING  Y  N  28  
D96  C1   N3   SING  Y  N  29  
D96  C5   C7   SING  N  N  30  
D96  C5   C6   DOUB  Y  N  31  
D96  N3   C6   SING  Y  N  32  
D96  N2   H1   SING  N  N  33  
D96  C6   H2   SING  N  N  34  
D96  N3   H3   SING  N  N  35  
D96  N4   H4   SING  N  N  36  
D96  N4   H5   SING  N  N  37  
D96  C7   H6   SING  N  N  38  
D96  C7   H7   SING  N  N  39  
D96  C9   H8   SING  N  N  40  
D96  C10  H9   SING  N  N  41  
D96  C12  H10  SING  N  N  42  
D96  C13  H11  SING  N  N  43  
D96  N5   H12  SING  N  N  44  
D96  C15  H13  SING  N  N  45  
D96  C16  H14  SING  N  N  46  
D96  C16  H15  SING  N  N  47  
D96  O3   H16  SING  N  N  48  
D96  C18  H17  SING  N  N  49  
D96  C18  H18  SING  N  N  50  
D96  O6   H19  SING  N  N  51  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D96  SMILES            ACDLabs               12.01  "N=2c1ncc(c1C(NC=2N)=O)Cc3ccc(cc3)C(=O)NC(CCC(O)=O)C(O)=O"  
D96  InChI             InChI                 1.03   "InChI=1S/C19H19N5O6/c20-19-23-15-14(17(28)24-19)11(8-21-15)7-9-1-3-10(4-2-9)16(27)22-12(18(29)30)5-6-13(25)26/h1-4,8,12H,5-7H2,(H,22,27)(H,25,26)(H,29,30)(H4,20,21,23,24,28)/t12-/m1/s1"  
D96  InChIKey          InChI                 1.03   VDHBMZRBPMTLGE-GFCCVEGCSA-N  
D96  SMILES_CANONICAL  CACTVS                3.385  "NC1=Nc2[nH]cc(Cc3ccc(cc3)C(=O)N[C@H](CCC(O)=O)C(O)=O)c2C(=O)N1"  
D96  SMILES            CACTVS                3.385  "NC1=Nc2[nH]cc(Cc3ccc(cc3)C(=O)N[CH](CCC(O)=O)C(O)=O)c2C(=O)N1"  
D96  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1Cc2c[nH]c3c2C(=O)NC(=N3)N)C(=O)N[C@H](CCC(=O)O)C(=O)O"  
D96  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1Cc2c[nH]c3c2C(=O)NC(=N3)N)C(=O)NC(CCC(=O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
D96  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}-D-glutamic acid"  
D96  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R})-2-[[4-[(2-azanyl-4-oxidanylidene-3,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)methyl]phenyl]carbonylamino]pentanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D96  "Create component"  2019-04-15  RCSB  
D96  "Initial release"   2019-06-19  RCSB  
##
