data_SE6
# 
_chem_comp.id                                    SE6 
_chem_comp.name                                  "[(2E)-3-(hydroxymethyl)hexa-2,5-dienyl] phosphono hydrogen phosphate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H14 O8 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-11 
_chem_comp.pdbx_modified_date                    2023-09-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        288.129 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SE6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IZG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SE6 OAM O1  O 0 1 N N N 19.982 20.701 -2.456 4.406  -0.115 -0.694 OAM SE6 1  
SE6 PAK P1  P 0 1 N N N 21.274 20.664 -1.577 3.671  -0.025 0.588  PAK SE6 2  
SE6 OAN O2  O 0 1 N N N 22.091 19.363 -1.885 3.631  -1.476 1.286  OAN SE6 3  
SE6 OAL O3  O 0 1 N N N 20.962 20.841 -0.112 4.414  1.019  1.561  OAL SE6 4  
SE6 OAJ O4  O 0 1 N N N 22.168 21.884 -2.153 2.166  0.477  0.310  OAJ SE6 5  
SE6 PAG P2  P 0 1 N N N 22.888 23.123 -1.435 1.039  0.087  -0.772 PAG SE6 6  
SE6 OAI O5  O 0 1 N N N 23.809 22.653 -0.290 1.420  0.727  -2.199 OAI SE6 7  
SE6 OAH O6  O 0 1 N N N 23.569 23.796 -2.618 0.963  -1.386 -0.895 OAH SE6 8  
SE6 OAF O7  O 0 1 N N N 21.752 24.073 -0.745 -0.387 0.660  -0.290 OAF SE6 9  
SE6 CAE C1  C 0 1 N N N 20.777 24.680 -1.671 -1.607 0.390  -0.983 CAE SE6 10 
SE6 CAC C2  C 0 1 N N N 19.818 25.350 -0.769 -2.749 1.072  -0.273 CAC SE6 11 
SE6 CAB C3  C 0 1 N N N 19.428 26.795 -0.904 -3.869 0.426  -0.062 CAB SE6 12 
SE6 CAA C4  C 0 1 N N N 18.422 27.401 0.059  -4.962 1.061  0.757  CAA SE6 13 
SE6 OAP O8  O 0 1 N N N 17.864 26.433 0.921  -4.543 2.357  1.189  OAP SE6 14 
SE6 CAD C5  C 0 1 N N N 19.909 27.686 -1.957 -4.063 -0.952 -0.639 CAD SE6 15 
SE6 CAO C6  C 0 1 N N N 20.824 28.679 -1.275 -3.670 -1.986 0.384  CAO SE6 16 
SE6 CAQ C7  C 0 1 N N N 20.370 30.011 -0.866 -4.519 -2.921 0.732  CAQ SE6 17 
SE6 H1  H1  H 0 1 N N N 21.638 18.853 -2.547 3.164  -1.492 2.132  H1  SE6 18 
SE6 H2  H2  H 0 1 N N N 20.024 20.943 0.002  5.327  0.779  1.772  H2  SE6 19 
SE6 H3  H3  H 0 1 N N N 24.711 22.863 -0.502 1.487  1.691  -2.193 H3  SE6 20 
SE6 H4  H4  H 0 1 N N N 20.276 23.910 -2.276 -1.537 0.768  -2.003 H4  SE6 21 
SE6 H5  H5  H 0 1 N N N 21.266 25.407 -2.336 -1.783 -0.685 -1.004 H5  SE6 22 
SE6 H6  H6  H 0 1 N N N 19.375 24.772 0.028  -2.643 2.093  0.062  H6  SE6 23 
SE6 H7  H7  H 0 1 N N N 18.928 28.167 0.665  -5.863 1.154  0.151  H7  SE6 24 
SE6 H8  H8  H 0 1 N N N 17.613 27.868 -0.521 -5.173 0.439  1.627  H8  SE6 25 
SE6 H9  H9  H 0 1 N N N 17.242 26.850 1.506  -5.199 2.826  1.723  H9  SE6 26 
SE6 H10 H10 H 0 1 N N N 19.065 28.207 -2.432 -5.110 -1.089 -0.909 H10 SE6 27 
SE6 H11 H11 H 0 1 N N N 20.462 27.116 -2.717 -3.441 -1.066 -1.528 H11 SE6 28 
SE6 H12 H12 H 0 1 N N N 21.848 28.396 -1.083 -2.687 -1.956 0.832  H12 SE6 29 
SE6 H14 H14 H 0 1 N N N 21.056 30.690 -0.381 -5.501 -2.951 0.284  H14 SE6 30 
SE6 H15 H15 H 0 1 N N N 19.350 30.314 -1.049 -4.237 -3.661 1.465  H15 SE6 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SE6 OAH PAG DOUB N N 1  
SE6 OAM PAK DOUB N N 2  
SE6 OAJ PAK SING N N 3  
SE6 OAJ PAG SING N N 4  
SE6 CAD CAO SING N N 5  
SE6 CAD CAB SING N N 6  
SE6 OAN PAK SING N N 7  
SE6 CAE CAC SING N N 8  
SE6 CAE OAF SING N N 9  
SE6 PAK OAL SING N N 10 
SE6 PAG OAF SING N N 11 
SE6 PAG OAI SING N N 12 
SE6 CAO CAQ DOUB N N 13 
SE6 CAB CAC DOUB N E 14 
SE6 CAB CAA SING N N 15 
SE6 CAA OAP SING N N 16 
SE6 OAN H1  SING N N 17 
SE6 OAL H2  SING N N 18 
SE6 OAI H3  SING N N 19 
SE6 CAE H4  SING N N 20 
SE6 CAE H5  SING N N 21 
SE6 CAC H6  SING N N 22 
SE6 CAA H7  SING N N 23 
SE6 CAA H8  SING N N 24 
SE6 OAP H9  SING N N 25 
SE6 CAD H10 SING N N 26 
SE6 CAD H11 SING N N 27 
SE6 CAO H12 SING N N 28 
SE6 CAQ H14 SING N N 29 
SE6 CAQ H15 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SE6 InChI            InChI                1.06  "InChI=1S/C7H14O8P2/c1-2-3-7(6-8)4-5-14-17(12,13)15-16(9,10)11/h2,4,8H,1,3,5-6H2,(H,12,13)(H2,9,10,11)/b7-4+" 
SE6 InChIKey         InChI                1.06  RHMQIVMXZYACOO-QPJJXVBHSA-N                                                                                   
SE6 SMILES_CANONICAL CACTVS               3.385 "OC\C(CC=C)=C\CO[P](O)(=O)O[P](O)(O)=O"                                                                       
SE6 SMILES           CACTVS               3.385 "OCC(CC=C)=CCO[P](O)(=O)O[P](O)(O)=O"                                                                         
SE6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=CC/C(=C\COP(=O)(O)OP(=O)(O)O)/CO"                                                                          
SE6 SMILES           "OpenEye OEToolkits" 2.0.7 "C=CCC(=CCOP(=O)(O)OP(=O)(O)O)CO"                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           SE6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{E})-3-(hydroxymethyl)hexa-2,5-dienyl] phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SE6 "Create component" 2023-04-11 PDBJ 
SE6 "Initial release"  2023-09-13 RCSB 
# 
