data_8B7
#

_chem_comp.id                                   8B7
_chem_comp.name                                 "6-deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranose"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C18 H32 O15"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-01-17
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       488.438
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8B7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5UFF
_chem_comp.pdbx_subcomponent_list               "BGC GAL FUC"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
8B7  CC2  C14  C  0  1  N  N  R   3.865   4.071  22.138   4.258  -1.268   0.535  BGC  1  C2    polymer  1   1  
8B7  CC3  C15  C  0  1  N  N  R   4.884   5.092  22.291   2.943  -0.627   0.989  BGC  1  C3    polymer  1   2  
8B7  CC4  C16  C  0  1  N  N  S   4.960   5.582  23.703   1.987  -0.548  -0.205  BGC  1  C4    polymer  1   3  
8B7  CC5  C17  C  0  1  N  N  R   5.053   4.435  24.701   1.782  -1.953  -0.778  BGC  1  C5    polymer  1   4  
8B7  CC6  C18  C  0  1  N  N  N   4.723   4.859  26.011   0.875  -1.874  -2.008  BGC  1  C6    polymer  1   5  
8B7  CC1  C13  C  0  1  N  N  R   4.218   2.922  22.925   3.965  -2.645  -0.067  BGC  1  C1    polymer  1   6  
8B7  OC1  O11  O  0  1  N  N  N   3.328   1.849  22.651   5.180  -3.226  -0.544  BGC  1  O1    polymer  1   7  
8B7  OC2  O12  O  0  1  N  N  N   3.707   3.652  20.715   5.131  -1.413   1.657  BGC  1  O2    polymer  1   8  
8B7  OC3  O13  O  0  1  N  N  N   4.603   6.233  21.384   3.199   0.688   1.485  BGC  1  O3    polymer  1   9  
8B7  OB1  O6   O  0  1  N  N  N   6.221   6.278  23.772   0.731  -0.018   0.223  BGC  1  O4    polymer  1  10  
8B7  OC5  O14  O  0  1  N  N  N   4.091   3.311  24.339   3.046  -2.503  -1.152  BGC  1  O5    polymer  1  11  
8B7  OC6  O15  O  0  1  N  N  N   5.642   4.248  26.898   0.570  -3.195  -2.460  BGC  1  O6    polymer  1  12  
8B7  CB1  C7   C  0  1  N  N  S   6.154   7.493  24.468   0.355   1.192  -0.438  GAL  2  C1    polymer  1  13  
8B7  CB2  C8   C  0  1  N  N  R   7.549   7.906  24.716  -1.072   1.571  -0.035  GAL  2  C2    polymer  1  14  
8B7  CB3  C9   C  0  1  N  N  S   7.626   9.224  25.312  -1.446   2.900  -0.700  GAL  2  C3    polymer  1  15  
8B7  CB4  C10  C  0  1  N  N  R   6.920  10.248  24.512  -0.424   3.966  -0.293  GAL  2  C4    polymer  1  16  
8B7  CB5  C11  C  0  1  N  N  R   5.468   9.875  24.188   0.978   3.495  -0.686  GAL  2  C5    polymer  1  17  
8B7  CB6  C12  C  0  1  N  N  N   4.917  10.748  23.245   2.010   4.528  -0.229  GAL  2  C6    polymer  1  18  
8B7  OA1  O1   O  0  1  N  N  N   8.140   6.970  25.701  -1.976   0.552  -0.465  GAL  2  O2    polymer  1  19  
8B7  OB3  O7   O  0  1  N  N  N   9.033   9.605  25.516  -2.749   3.299  -0.271  GAL  2  O3    polymer  1  20  
8B7  OB4  O8   O  0  1  N  N  N   7.660  10.607  23.340  -0.482   4.169   1.120  GAL  2  O4    polymer  1  21  
8B7  OB5  O9   O  0  1  N  N  N   5.450   8.457  23.613   1.250   2.240  -0.058  GAL  2  O5    polymer  1  22  
8B7  OB6  O10  O  0  1  N  N  N   3.668  10.203  22.951   3.306   4.145  -0.697  GAL  2  O6    polymer  1  23  
8B7  CA1  C1   C  0  1  N  N  S   9.458   6.664  25.396  -3.123   0.400   0.375  FUC  3  C1    polymer  1  24  
8B7  CA2  C2   C  0  1  N  N  S  10.181   6.493  26.702  -4.154  -0.489  -0.326  FUC  3  C2    polymer  1  25  
8B7  CA3  C3   C  0  1  N  N  R   9.579   5.391  27.521  -3.552  -1.880  -0.546  FUC  3  C3    polymer  1  26  
8B7  CA4  C4   C  0  1  N  N  S   9.449   4.114  26.765  -3.112  -2.453   0.805  FUC  3  C4    polymer  1  27  
8B7  CA5  C5   C  0  1  N  N  S   8.826   4.258  25.387  -2.121  -1.489   1.461  FUC  3  C5    polymer  1  28  
8B7  CA6  C6   C  0  1  N  N  N   9.008   3.030  24.579  -1.722  -2.025   2.838  FUC  3  C6    polymer  1  29  
8B7  OA2  O2   O  0  1  N  N  N  10.124   7.726  27.454  -4.502   0.086  -1.587  FUC  3  O2    polymer  1  30  
8B7  OA3  O3   O  0  1  N  N  N  10.378   5.173  28.726  -4.533  -2.738  -1.132  FUC  3  O3    polymer  1  31  
8B7  OA4  O4   O  0  1  N  N  N  10.778   3.552  26.649  -4.253  -2.614   1.650  FUC  3  O4    polymer  1  32  
8B7  OA5  O5   O  0  1  N  N  N   9.345   5.403  24.609  -2.733  -0.206   1.609  FUC  3  O5    polymer  1  33  
8B7  H24  H24  H  0  1  N  N  N   2.903   4.470  22.492   4.732  -0.636  -0.216  BGC  1  H2    polymer  1  34  
8B7  H26  H26  H  0  1  N  N  N   5.861   4.664  22.021   2.496  -1.233   1.777  BGC  1  H3    polymer  1  35  
8B7  H28  H28  H  0  1  N  N  N   4.112   6.240  23.942   2.414   0.100  -0.971  BGC  1  H4    polymer  1  36  
8B7  H29  H29  H  0  1  N  N  N   6.078   4.037  24.682   1.317  -2.588  -0.024  BGC  1  H5    polymer  1  37  
8B7  H30  H30  H  0  1  N  N  N   4.802   5.954  26.083  -0.048  -1.357  -1.747  BGC  1  H6C1  polymer  1  38  
8B7  H31  H31  H  0  1  N  N  N   3.697   4.548  26.260   1.386  -1.328  -2.801  BGC  1  H6C2  polymer  1  39  
8B7  H22  H22  H  0  1  N  N  N   5.256   2.623  22.715   3.529  -3.290   0.697  BGC  1  H1    polymer  1  40  
8B7  H23  H23  H  0  1  N  N  N   3.570   1.095  23.176   5.069  -4.101  -0.939  BGC  1  HA    polymer  1  41  
8B7  H25  H25  H  0  1  N  N  N   3.473   4.406  20.186   5.983  -1.818   1.443  BGC  1  HB    polymer  1  42  
8B7  H27  H27  H  0  1  N  N  N   5.275   6.896  21.491   3.804   0.714   2.239  BGC  1  HC    polymer  1  43  
8B7  H32  H32  H  0  1  N  N  N   5.447   4.513  27.789  -0.002  -3.222  -3.239  BGC  1  H6    polymer  1  44  
8B7  H12  H12  H  0  1  N  N  N   5.621   7.374  25.423   0.402   1.046  -1.517  GAL  2  H1    polymer  1  45  
8B7  H13  H13  H  0  1  N  N  N   8.123   7.875  23.778  -1.129   1.676   1.048  GAL  2  H2    polymer  1  46  
8B7  H14  H14  H  0  1  N  N  N   7.143   9.180  26.300  -1.437   2.781  -1.783  GAL  2  H3    polymer  1  47  
8B7  H16  H16  H  0  1  N  N  N   6.863  11.148  25.142  -0.651   4.902  -0.804  GAL  2  H4    polymer  1  48  
8B7  H18  H18  H  0  1  N  N  N   4.882   9.888  25.119   1.033   3.380  -1.768  GAL  2  H5    polymer  1  49  
8B7  H19  H19  H  0  1  N  N  N   4.811  11.758  23.666   1.751   5.505  -0.636  GAL  2  H61   polymer  1  50  
8B7  H20  H20  H  0  1  N  N  N   5.544  10.791  22.342   2.017   4.577   0.860  GAL  2  H62   polymer  1  51  
8B7  H15  H15  H  0  1  N  N  N   9.074  10.470  25.907  -3.051   4.134  -0.654  GAL  2  HO3   polymer  1  52  
8B7  H17  H17  H  0  1  N  N  N   7.180  11.265  22.851   0.140   4.832   1.449  GAL  2  HO4   polymer  1  53  
8B7  H21  H21  H  0  1  N  N  N   3.228  10.748  22.309   4.011   4.756  -0.443  GAL  2  HO6   polymer  1  54  
8B7  H1   H1   H  0  1  N  N  N   9.937   7.451  24.795  -3.560   1.379   0.572  FUC  3  H1    polymer  1  55  
8B7  H2   H2   H  0  1  N  N  N  11.231   6.242  26.492  -5.046  -0.572   0.296  FUC  3  H2    polymer  1  56  
8B7  H4   H4   H  0  1  N  N  N   8.571   5.709  27.827  -2.690  -1.803  -1.208  FUC  3  H3    polymer  1  57  
8B7  H6   H6   H  0  1  N  N  N   8.821   3.427  27.351  -2.633  -3.420   0.651  FUC  3  H4    polymer  1  58  
8B7  H8   H8   H  0  1  N  N  N   7.746   4.410  25.530  -1.233  -1.398   0.835  FUC  3  H5    polymer  1  59  
8B7  H10  H10  H  0  1  N  N  N  10.082   2.828  24.456  -0.950  -1.386   3.267  FUC  3  H61   polymer  1  60  
8B7  H11  H11  H  0  1  N  N  N   8.531   2.181  25.090  -2.594  -2.031   3.492  FUC  3  H62   polymer  1  61  
8B7  H9   H9   H  0  1  N  N  N   8.546   3.169  23.590  -1.338  -3.040   2.735  FUC  3  H63   polymer  1  62  
8B7  H3   H3   H  0  1  N  N  N  10.582   7.616  28.279  -4.886   0.972  -1.523  FUC  3  HO2   polymer  1  63  
8B7  H5   H5   H  0  1  N  N  N   9.992   4.474  29.240  -4.862  -2.431  -1.988  FUC  3  HO3   polymer  1  64  
8B7  H7   H7   H  0  1  N  N  N  10.735   2.733  26.170  -4.048  -2.974   2.524  FUC  3  HO4   polymer  1  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8B7  CA1  OA5  SING  N  N   1  
8B7  CA1  OA1  SING  N  N   2  
8B7  CA1  CA2  SING  N  N   3  
8B7  OA1  CB2  SING  N  N   4  
8B7  CA2  CA3  SING  N  N   5  
8B7  CA2  OA2  SING  N  N   6  
8B7  CA3  CA4  SING  N  N   7  
8B7  CA3  OA3  SING  N  N   8  
8B7  CA4  OA4  SING  N  N   9  
8B7  CA4  CA5  SING  N  N  10  
8B7  CA5  CA6  SING  N  N  11  
8B7  CA5  OA5  SING  N  N  12  
8B7  CB1  OB1  SING  N  N  13  
8B7  CB1  CB2  SING  N  N  14  
8B7  CB1  OB5  SING  N  N  15  
8B7  OB1  CC4  SING  N  N  16  
8B7  CB2  CB3  SING  N  N  17  
8B7  CB3  CB4  SING  N  N  18  
8B7  CB3  OB3  SING  N  N  19  
8B7  CB4  OB4  SING  N  N  20  
8B7  CB4  CB5  SING  N  N  21  
8B7  CB5  OB5  SING  N  N  22  
8B7  CB5  CB6  SING  N  N  23  
8B7  CB6  OB6  SING  N  N  24  
8B7  CC1  CC2  SING  N  N  25  
8B7  CC1  OC1  SING  N  N  26  
8B7  CC1  OC5  SING  N  N  27  
8B7  CC2  OC2  SING  N  N  28  
8B7  CC2  CC3  SING  N  N  29  
8B7  CC3  OC3  SING  N  N  30  
8B7  CC3  CC4  SING  N  N  31  
8B7  CC4  CC5  SING  N  N  32  
8B7  CC5  OC5  SING  N  N  33  
8B7  CC5  CC6  SING  N  N  34  
8B7  CC6  OC6  SING  N  N  35  
8B7  CA1  H1   SING  N  N  36  
8B7  CA2  H2   SING  N  N  37  
8B7  OA2  H3   SING  N  N  38  
8B7  CA3  H4   SING  N  N  39  
8B7  OA3  H5   SING  N  N  40  
8B7  CA4  H6   SING  N  N  41  
8B7  OA4  H7   SING  N  N  42  
8B7  CA5  H8   SING  N  N  43  
8B7  CA6  H9   SING  N  N  44  
8B7  CA6  H10  SING  N  N  45  
8B7  CA6  H11  SING  N  N  46  
8B7  CB1  H12  SING  N  N  47  
8B7  CB2  H13  SING  N  N  48  
8B7  CB3  H14  SING  N  N  49  
8B7  OB3  H15  SING  N  N  50  
8B7  CB4  H16  SING  N  N  51  
8B7  OB4  H17  SING  N  N  52  
8B7  CB5  H18  SING  N  N  53  
8B7  CB6  H19  SING  N  N  54  
8B7  CB6  H20  SING  N  N  55  
8B7  OB6  H21  SING  N  N  56  
8B7  CC1  H22  SING  N  N  57  
8B7  OC1  H23  SING  N  N  58  
8B7  CC2  H24  SING  N  N  59  
8B7  OC2  H25  SING  N  N  60  
8B7  CC3  H26  SING  N  N  61  
8B7  OC3  H27  SING  N  N  62  
8B7  CC4  H28  SING  N  N  63  
8B7  CC5  H29  SING  N  N  64  
8B7  CC6  H30  SING  N  N  65  
8B7  CC6  H31  SING  N  N  66  
8B7  OC6  H32  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8B7  SMILES            ACDLabs               12.01  "C3(OC2C(OC1C(C(C(OC1CO)O)O)O)OC(C(C2O)O)CO)C(O)C(O)C(O)C(O3)C"  
8B7  InChI             InChI                 1.03   "InChI=1S/C18H32O15/c1-4-7(21)9(23)13(27)17(29-4)33-15-10(24)8(22)5(2-19)31-18(15)32-14-6(3-20)30-16(28)12(26)11(14)25/h4-28H,2-3H2,1H3/t4-,5+,6+,7+,8-,9+,10-,11+,12+,13-,14+,15+,16+,17-,18-/m0/s1"  
8B7  InChIKey          InChI                 1.03   SNFSYLYCDAVZGP-OHWKOEMOSA-N  
8B7  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1O[C@@H](O[C@@H]2[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]2O[C@H]3[C@H](O)[C@@H](O)[C@H](O)O[C@@H]3CO)[C@@H](O)[C@H](O)[C@@H]1O"  
8B7  SMILES            CACTVS                3.385  "C[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](CO)O[CH]2O[CH]3[CH](O)[CH](O)[CH](O)O[CH]3CO)[CH](O)[CH](O)[CH]1O"  
8B7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O[C@@H]2[C@H]([C@H]([C@H](O[C@H]2O[C@@H]3[C@H](O[C@H]([C@@H]([C@H]3O)O)O)CO)CO)O)O)O)O)O"  
8B7  SMILES            "OpenEye OEToolkits"  2.0.6  "CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(OC(C(C3O)O)O)CO)CO)O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8B7  "SYSTEMATIC NAME"  ACDLabs               12.01  "6-deoxy-alpha-L-galactopyranosyl-(1->2)-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranose"  
8B7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{S},3~{S},4~{R},5~{S},6~{S})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl]oxy-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-methyl-oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8B7  "Create component"    2017-01-17  RCSB  
8B7  "Initial release"     2017-10-18  RCSB  
8B7  "Other modification"  2020-07-03  RCSB  
8B7  "Obsolete component"  2020-07-17  RCSB  
##
