data_4D8
#

_chem_comp.id                                   4D8
_chem_comp.name                                 "(3beta,4alpha,5beta,14beta)-3-hydroxy-4-methylcholesta-8,24-diene-4-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H46 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        4alpha-carboxy-4beta-methyl-zymosterol
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-01-29
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       442.674
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4D8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4S15
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4D8  O3   O3   O  0  1  N  N  N  18.269  24.359  34.418  -6.835  -1.465  -0.023  O3   4D8   1  
4D8  OC1  OC1  O  0  1  N  N  N  15.140  24.949  32.491  -5.246   2.214   0.732  OC1  4D8   2  
4D8  OC2  OC2  O  0  1  N  N  N  15.650  26.810  33.527  -7.155   1.306   0.086  OC2  4D8   3  
4D8  C13  C13  C  0  1  N  N  R  10.971  22.042  37.677   1.524  -0.094   0.426  C13  4D8   4  
4D8  C14  C14  C  0  1  N  N  R  11.109  22.633  36.293   0.592   1.069   0.745  C14  4D8   5  
4D8  C10  C10  C  0  1  N  N  S  14.845  23.131  36.355  -2.642  -0.852  -0.125  C10  4D8   6  
4D8  C17  C17  C  0  1  N  N  R   9.501  21.628  37.649   2.891   0.499   0.766  C17  4D8   7  
4D8  C5   C5   C  0  1  N  N  R  14.725  24.276  35.358  -3.555   0.352  -0.040  C5   4D8   8  
4D8  C8   C8   C  0  1  N  N  N  12.410  23.306  36.180  -0.808   0.736   0.288  C8   4D8   9  
4D8  C9   C9   C  0  1  N  N  N  13.437  22.594  36.437  -1.239  -0.493   0.333  C9   4D8  10  
4D8  C12  C12  C  0  1  N  N  N  12.062  20.979  37.780   1.024  -1.222   1.330  C12  4D8  11  
4D8  C15  C15  C  0  1  N  N  N   9.888  23.516  36.099   1.307   2.247   0.071  C15  4D8  12  
4D8  C16  C16  C  0  1  N  N  N   8.809  22.750  36.858   2.780   1.981   0.413  C16  4D8  13  
4D8  C11  C11  C  0  1  N  N  N  13.239  21.205  36.813  -0.364  -1.616   0.835  C11  4D8  14  
4D8  C4   C4   C  0  1  N  N  S  16.021  24.835  34.794  -5.021   0.096  -0.315  C4   4D8  15  
4D8  C6   C6   C  0  1  N  N  N  13.827  25.361  35.926  -2.952   1.465  -0.896  C6   4D8  16  
4D8  C7   C7   C  0  1  N  N  N  12.431  24.794  35.772  -1.655   1.883  -0.205  C7   4D8  17  
4D8  C1   C1   C  0  1  N  N  N  15.756  22.028  35.847  -3.188  -2.005   0.716  C1   4D8  18  
4D8  C20  C20  C  0  1  N  N  R   8.815  21.402  38.998   3.978  -0.169  -0.078  C20  4D8  19  
4D8  C18  C18  C  0  1  N  N  N  11.159  23.117  38.749   1.477  -0.493  -1.049  C18  4D8  20  
4D8  C3   C3   C  0  1  N  N  S  16.999  23.731  34.410  -5.522  -1.135   0.442  C3   4D8  21  
4D8  C2   C2   C  0  1  N  N  N  17.099  22.562  35.380  -4.607  -2.339   0.258  C2   4D8  22  
4D8  C19  C19  C  0  1  N  N  N  15.249  23.563  37.758  -2.493  -1.347  -1.563  C19  4D8  23  
4D8  C4B  C4B  C  0  1  N  N  N  16.700  25.838  35.727  -5.334  -0.036  -1.804  C4B  4D8  24  
4D8  C22  C22  C  0  1  N  N  N   7.324  21.135  38.799   5.318   0.527   0.171  C22  4D8  25  
4D8  C4A  C4A  C  0  1  N  N  N  15.594  25.593  33.561  -5.818   1.287   0.208  C4A  4D8  26  
4D8  C21  C21  C  0  1  N  N  N   9.402  20.251  39.809   4.091  -1.645   0.312  C21  4D8  27  
4D8  C23  C23  C  0  1  N  N  N   7.067  20.029  37.776   6.379  -0.058  -0.762  C23  4D8  28  
4D8  C24  C24  C  0  1  N  N  N   5.792  19.298  38.114   7.698   0.628  -0.517  C24  4D8  29  
4D8  C25  C25  C  0  1  N  N  N   4.850  19.060  37.190   8.768  -0.083  -0.258  C25  4D8  30  
4D8  C26  C26  C  0  1  N  N  N   5.010  19.531  35.776  10.046   0.602   0.151  C26  4D8  31  
4D8  C27  C27  C  0  1  N  N  N   3.608  18.326  37.588   8.720  -1.585  -0.371  C27  4D8  32  
4D8  H1   H1   H  0  1  N  N  N  18.938  23.725  34.185  -7.223  -2.238   0.410  H1   4D8  33  
4D8  H2   H2   H  0  1  N  N  N  15.339  27.118  32.684  -7.616   2.083   0.432  H2   4D8  34  
4D8  H3   H3   H  0  1  N  N  N  11.064  21.815  35.559   0.578   1.232   1.826  H3   4D8  35  
4D8  H4   H4   H  0  1  N  N  N   9.418  20.700  37.065   3.102   0.373   1.826  H4   4D8  36  
4D8  H5   H5   H  0  1  N  N  N  14.181  23.862  34.496  -3.493   0.715   1.019  H5   4D8  37  
4D8  H6   H6   H  0  1  N  N  N  11.614  19.999  37.559   1.703  -2.077   1.269  H6   4D8  38  
4D8  H7   H7   H  0  1  N  N  N  12.452  20.980  38.808   0.973  -0.876   2.366  H7   4D8  39  
4D8  H8   H8   H  0  1  N  N  N  10.046  24.515  36.531   1.145   2.255  -1.006  H8   4D8  40  
4D8  H9   H9   H  0  1  N  N  N   9.632  23.614  35.034   0.978   3.196   0.504  H9   4D8  41  
4D8  H10  H10  H  0  1  N  N  N   8.285  23.427  37.549   3.083   2.593   1.265  H10  4D8  42  
4D8  H11  H11  H  0  1  N  N  N   8.087  22.318  36.149   3.412   2.211  -0.446  H11  4D8  43  
4D8  H12  H12  H  0  1  N  N  N  13.052  20.623  35.899  -0.885  -2.103   1.668  H12  4D8  44  
4D8  H13  H13  H  0  1  N  N  N  14.158  20.843  37.297  -0.258  -2.364   0.049  H13  4D8  45  
4D8  H14  H14  H  0  1  N  N  N  14.059  25.547  36.985  -2.753   1.150  -1.914  H14  4D8  46  
4D8  H15  H15  H  0  1  N  N  N  13.935  26.296  35.357  -3.627   2.329  -0.924  H15  4D8  47  
4D8  H16  H16  H  0  1  N  N  N  11.738  25.356  36.415  -1.908   2.522   0.643  H16  4D8  48  
4D8  H17  H17  H  0  1  N  N  N  12.115  24.887  34.722  -1.067   2.474  -0.911  H17  4D8  49  
4D8  H18  H18  H  0  1  N  N  N  15.263  21.522  35.004  -2.549  -2.882   0.595  H18  4D8  50  
4D8  H19  H19  H  0  1  N  N  N  15.925  21.306  36.659  -3.201  -1.714   1.768  H19  4D8  51  
4D8  H20  H20  H  0  1  N  N  N   8.919  22.323  39.590   3.719  -0.091  -1.133  H20  4D8  52  
4D8  H21  H21  H  0  1  N  N  N  11.054  22.664  39.746   0.463  -0.796  -1.312  H21  4D8  53  
4D8  H22  H22  H  0  1  N  N  N  12.161  23.561  38.651   1.773   0.356  -1.665  H22  4D8  54  
4D8  H23  H23  H  0  1  N  N  N  10.397  23.900  38.620   2.160  -1.324  -1.223  H23  4D8  55  
4D8  H24  H24  H  0  1  N  N  N  16.751  23.355  33.406  -5.585  -0.891   1.508  H24  4D8  56  
4D8  H25  H25  H  0  1  N  N  N  17.641  21.745  34.882  -4.616  -2.671  -0.775  H25  4D8  57  
4D8  H26  H26  H  0  1  N  N  N  17.665  22.893  36.263  -4.986  -3.164   0.879  H26  4D8  58  
4D8  H27  H27  H  0  1  N  N  N  15.312  22.680  38.410  -1.717  -2.112  -1.605  H27  4D8  59  
4D8  H28  H28  H  0  1  N  N  N  16.229  24.061  37.720  -3.439  -1.770  -1.902  H28  4D8  60  
4D8  H29  H29  H  0  1  N  N  N  14.498  24.261  38.157  -2.217  -0.513  -2.208  H29  4D8  61  
4D8  H30  H30  H  0  1  N  N  N  17.028  25.324  36.643  -4.787  -0.884  -2.217  H30  4D8  62  
4D8  H31  H31  H  0  1  N  N  N  17.572  26.277  35.221  -6.404  -0.194  -1.939  H31  4D8  63  
4D8  H32  H32  H  0  1  N  N  N  15.988  26.635  35.989  -5.034   0.876  -2.321  H32  4D8  64  
4D8  H33  H33  H  0  1  N  N  N   6.842  22.060  38.449   5.213   1.595  -0.022  H33  4D8  65  
4D8  H34  H34  H  0  1  N  N  N   6.886  20.835  39.762   5.620   0.373   1.207  H34  4D8  66  
4D8  H35  H35  H  0  1  N  N  N   8.856  20.155  40.759   4.904  -2.108  -0.247  H35  4D8  67  
4D8  H36  H36  H  0  1  N  N  N   9.310  19.316  39.238   4.294  -1.724   1.380  H36  4D8  68  
4D8  H37  H37  H  0  1  N  N  N  10.464  20.452  40.015   3.155  -2.154   0.081  H37  4D8  69  
4D8  H38  H38  H  0  1  N  N  N   7.908  19.320  37.788   6.483  -1.126  -0.569  H38  4D8  70  
4D8  H39  H39  H  0  1  N  N  N   6.977  20.474  36.774   6.076   0.096  -1.798  H39  4D8  71  
4D8  H40  H40  H  0  1  N  N  N   5.634  18.957  39.127   7.761   1.705  -0.554  H40  4D8  72  
4D8  H41  H41  H  0  1  N  N  N   5.976  20.046  35.668  10.636   0.832  -0.736  H41  4D8  73  
4D8  H42  H42  H  0  1  N  N  N   4.977  18.667  35.096   9.810   1.526   0.680  H42  4D8  74  
4D8  H43  H43  H  0  1  N  N  N   4.194  20.225  35.526  10.617  -0.056   0.806  H43  4D8  75  
4D8  H44  H44  H  0  1  N  N  N   3.664  18.060  38.654   7.749  -1.889  -0.761  H44  4D8  76  
4D8  H45  H45  H  0  1  N  N  N   2.732  18.968  37.416   9.505  -1.924  -1.046  H45  4D8  77  
4D8  H46  H46  H  0  1  N  N  N   3.515  17.410  36.986   8.871  -2.028   0.614  H46  4D8  78  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4D8  OC1  C4A  DOUB  N  N   1  
4D8  OC2  C4A  SING  N  N   2  
4D8  C4A  C4   SING  N  N   3  
4D8  C3   O3   SING  N  N   4  
4D8  C3   C4   SING  N  N   5  
4D8  C3   C2   SING  N  N   6  
4D8  C4   C5   SING  N  N   7  
4D8  C4   C4B  SING  N  N   8  
4D8  C5   C6   SING  N  N   9  
4D8  C5   C10  SING  N  N  10  
4D8  C2   C1   SING  N  N  11  
4D8  C7   C6   SING  N  N  12  
4D8  C7   C8   SING  N  N  13  
4D8  C26  C25  SING  N  N  14  
4D8  C1   C10  SING  N  N  15  
4D8  C15  C14  SING  N  N  16  
4D8  C15  C16  SING  N  N  17  
4D8  C8   C14  SING  N  N  18  
4D8  C8   C9   DOUB  N  N  19  
4D8  C14  C13  SING  N  N  20  
4D8  C10  C9   SING  N  N  21  
4D8  C10  C19  SING  N  N  22  
4D8  C9   C11  SING  N  N  23  
4D8  C11  C12  SING  N  N  24  
4D8  C16  C17  SING  N  N  25  
4D8  C25  C27  SING  N  N  26  
4D8  C25  C24  DOUB  N  N  27  
4D8  C17  C13  SING  N  N  28  
4D8  C17  C20  SING  N  N  29  
4D8  C13  C12  SING  N  N  30  
4D8  C13  C18  SING  N  N  31  
4D8  C23  C24  SING  N  N  32  
4D8  C23  C22  SING  N  N  33  
4D8  C22  C20  SING  N  N  34  
4D8  C20  C21  SING  N  N  35  
4D8  O3   H1   SING  N  N  36  
4D8  OC2  H2   SING  N  N  37  
4D8  C14  H3   SING  N  N  38  
4D8  C17  H4   SING  N  N  39  
4D8  C5   H5   SING  N  N  40  
4D8  C12  H6   SING  N  N  41  
4D8  C12  H7   SING  N  N  42  
4D8  C15  H8   SING  N  N  43  
4D8  C15  H9   SING  N  N  44  
4D8  C16  H10  SING  N  N  45  
4D8  C16  H11  SING  N  N  46  
4D8  C11  H12  SING  N  N  47  
4D8  C11  H13  SING  N  N  48  
4D8  C6   H14  SING  N  N  49  
4D8  C6   H15  SING  N  N  50  
4D8  C7   H16  SING  N  N  51  
4D8  C7   H17  SING  N  N  52  
4D8  C1   H18  SING  N  N  53  
4D8  C1   H19  SING  N  N  54  
4D8  C20  H20  SING  N  N  55  
4D8  C18  H21  SING  N  N  56  
4D8  C18  H22  SING  N  N  57  
4D8  C18  H23  SING  N  N  58  
4D8  C3   H24  SING  N  N  59  
4D8  C2   H25  SING  N  N  60  
4D8  C2   H26  SING  N  N  61  
4D8  C19  H27  SING  N  N  62  
4D8  C19  H28  SING  N  N  63  
4D8  C19  H29  SING  N  N  64  
4D8  C4B  H30  SING  N  N  65  
4D8  C4B  H31  SING  N  N  66  
4D8  C4B  H32  SING  N  N  67  
4D8  C22  H33  SING  N  N  68  
4D8  C22  H34  SING  N  N  69  
4D8  C21  H35  SING  N  N  70  
4D8  C21  H36  SING  N  N  71  
4D8  C21  H37  SING  N  N  72  
4D8  C23  H38  SING  N  N  73  
4D8  C23  H39  SING  N  N  74  
4D8  C24  H40  SING  N  N  75  
4D8  C26  H41  SING  N  N  76  
4D8  C26  H42  SING  N  N  77  
4D8  C26  H43  SING  N  N  78  
4D8  C27  H44  SING  N  N  79  
4D8  C27  H45  SING  N  N  80  
4D8  C27  H46  SING  N  N  81  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4D8  SMILES            ACDLabs               12.01  "O=C(O)C1(C2CCC3=C(C2(CCC1O)C)CCC4(C)C(C(C)CC\C=C(/C)C)CCC34)C"  
4D8  InChI             InChI                 1.03   "InChI=1S/C29H46O3/c1-18(2)8-7-9-19(3)21-11-12-22-20-10-13-24-28(5,23(20)14-16-27(21,22)4)17-15-25(30)29(24,6)26(31)32/h8,19,21-22,24-25,30H,7,9-17H2,1-6H3,(H,31,32)/t19-,21-,22+,24-,25+,27-,28-,29+/m1/s1"  
4D8  InChIKey          InChI                 1.03   MYWAIWDQTCHPTH-LJAIZBFVSA-N  
4D8  SMILES_CANONICAL  CACTVS                3.385  "C[C@H](CCC=C(C)C)[C@H]1CC[C@H]2C3=C(CC[C@]12C)[C@@]4(C)CC[C@H](O)[C@](C)([C@@H]4CC3)C(O)=O"  
4D8  SMILES            CACTVS                3.385  "C[CH](CCC=C(C)C)[CH]1CC[CH]2C3=C(CC[C]12C)[C]4(C)CC[CH](O)[C](C)([CH]4CC3)C(O)=O"  
4D8  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@H](CCC=C(C)C)[C@H]1CC[C@@H]2[C@@]1(CCC3=C2CC[C@@H]4[C@@]3(CC[C@@H]([C@@]4(C)C(=O)O)O)C)C"  
4D8  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(CCC=C(C)C)C1CCC2C1(CCC3=C2CCC4C3(CCC(C4(C)C(=O)O)O)C)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4D8  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3beta,4alpha,5beta,14beta)-3-hydroxy-4-methylcholesta-8,24-diene-4-carboxylic acid"  
4D8  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(3S,4S,5R,10S,13R,14R,17R)-4,10,13-trimethyl-17-[(2R)-6-methylhept-5-en-2-yl]-3-oxidanyl-1,2,3,5,6,7,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthrene-4-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4D8  "Create component"  2015-01-29  RCSB  
4D8  "Initial release"   2015-02-11  RCSB  
4D8  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     4D8
_pdbx_chem_comp_synonyms.name        4alpha-carboxy-4beta-methyl-zymosterol
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
