data_HF8
# 
_chem_comp.id                                    HF8 
_chem_comp.name                                  "[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H14 O9 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-12-04 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.246 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HF8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6IBM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HF8 C1  C1  C 0 1 N N S N N N 59.756 -15.843 -39.108 -2.694 0.372  0.365  C1  HF8 1  
HF8 C2  C2  C 0 1 N N S N N N 59.735 -14.493 -39.821 -2.153 -0.990 -0.077 C2  HF8 2  
HF8 C3  C3  C 0 1 N N R N N N 61.089 -14.197 -40.480 -0.787 -1.230 0.568  C3  HF8 3  
HF8 C4  C4  C 0 1 N N S N N N 62.257 -14.910 -39.806 0.183  -0.130 0.132  C4  HF8 4  
HF8 C5  C5  C 0 1 N N S N N N 62.082 -15.115 -38.309 -0.357 1.232  0.574  C5  HF8 5  
HF8 C7  C6  C 0 1 N N R N N N 60.735 -15.764 -37.926 -1.724 1.472  -0.070 C7  HF8 6  
HF8 C8  C7  C 0 1 N N N N N N 61.327 -12.696 -40.551 -0.246 -2.591 0.125  C8  HF8 7  
HF8 O9  O1  O 0 1 N N N N N N 62.551 -12.411 -41.245 -1.091 -3.626 0.632  O9  HF8 8  
HF8 O10 O2  O 0 1 N N N N N N 62.429 -16.227 -40.277 1.459  -0.354 0.734  O10 HF8 9  
HF8 O11 O3  O 0 1 N N N N N N 59.342 -13.479 -38.888 -2.019 -1.009 -1.500 O11 HF8 10 
HF8 O12 O4  O 0 1 N N N N N N 58.431 -16.157 -38.673 -3.970 0.596  -0.237 O12 HF8 11 
HF8 O13 O5  O 0 1 N N N N N N 61.008 -17.066 -37.378 -2.229 2.743  0.343  O13 HF8 12 
HF8 S15 S1  S 0 1 N N N N N N 63.439 -16.567 -41.386 2.637  0.040  -0.146 S15 HF8 13 
HF8 O18 O6  O 0 1 N N N N N N 63.381 -18.033 -41.459 3.805  -0.430 0.512  O18 HF8 14 
HF8 O19 O7  O 0 1 N N N N N N 62.977 -15.929 -42.613 2.289  -0.334 -1.472 O19 HF8 15 
HF8 O1  O8  O 0 1 N N N N N N 64.796 -16.144 -40.994 2.719  1.559  -0.136 O1  HF8 16 
HF8 O2  O9  O 0 1 N Y N N N N 62.221 -13.837 -37.687 0.548  2.259  0.167  O2  HF8 17 
HF8 H1  H1  H 0 1 N N N N N N 60.115 -16.609 -39.811 -2.796 0.387  1.451  H1  HF8 18 
HF8 H2  H2  H 0 1 N N N N N N 58.982 -14.550 -40.621 -2.844 -1.773 0.233  H2  HF8 19 
HF8 H3  H3  H 0 1 N N N N N N 61.034 -14.568 -41.514 -0.889 -1.215 1.653  H3  HF8 20 
HF8 H4  H4  H 0 1 N N N N N N 63.172 -14.323 -39.976 0.286  -0.145 -0.953 H4  HF8 21 
HF8 H5  H5  H 0 1 N N N N N N 62.886 -15.779 -37.959 -0.460 1.247  1.659  H5  HF8 22 
HF8 H6  H6  H 0 1 N N N N N N 60.272 -15.138 -37.149 -1.622 1.457  -1.156 H6  HF8 23 
HF8 H7  H7  H 0 1 N N N N N N 61.387 -12.291 -39.530 -0.227 -2.638 -0.964 H7  HF8 24 
HF8 H8  H8  H 0 1 N N N N N N 60.490 -12.222 -41.085 0.764  -2.724 0.512  H8  HF8 25 
HF8 H9  H9  H 0 1 N N N N N N 62.684 -11.471 -41.280 -0.807 -4.519 0.390  H9  HF8 26 
HF8 H10 H10 H 0 1 N N N N N N 58.501 -13.706 -38.508 -2.848 -0.863 -1.975 H10 HF8 27 
HF8 H11 H11 H 0 1 N N N N N N 58.434 -16.996 -38.228 -4.374 1.442  0.000  H11 HF8 28 
HF8 H12 H12 H 0 1 N N N N N N 61.614 -16.983 -36.651 -3.094 2.962  -0.029 H12 HF8 29 
HF8 H13 H13 H 0 1 N N N N N N 62.117 -13.929 -36.747 0.269  3.151  0.415  H13 HF8 30 
HF8 H14 H14 H 0 1 N N N N N N 65.344 -16.910 -40.872 3.441  1.918  -0.670 H14 HF8 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HF8 O19 S15 DOUB N N 1  
HF8 O18 S15 DOUB N N 2  
HF8 S15 O1  SING N N 3  
HF8 S15 O10 SING N N 4  
HF8 O9  C8  SING N N 5  
HF8 C8  C3  SING N N 6  
HF8 C3  C2  SING N N 7  
HF8 C3  C4  SING N N 8  
HF8 O10 C4  SING N N 9  
HF8 C2  C1  SING N N 10 
HF8 C2  O11 SING N N 11 
HF8 C4  C5  SING N N 12 
HF8 C1  O12 SING N N 13 
HF8 C1  C7  SING N N 14 
HF8 C5  C7  SING N N 15 
HF8 C7  O13 SING N N 16 
HF8 C5  O2  SING N N 17 
HF8 C1  H1  SING N N 18 
HF8 C2  H2  SING N N 19 
HF8 C3  H3  SING N N 20 
HF8 C4  H4  SING N N 21 
HF8 C5  H5  SING N N 22 
HF8 C7  H6  SING N N 23 
HF8 C8  H7  SING N N 24 
HF8 C8  H8  SING N N 25 
HF8 O9  H9  SING N N 26 
HF8 O11 H10 SING N N 27 
HF8 O12 H11 SING N N 28 
HF8 O13 H12 SING N N 29 
HF8 O2  H13 SING N N 30 
HF8 O1  H14 SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HF8 InChI            InChI                1.03  "InChI=1S/C7H14O9S/c8-1-2-3(9)4(10)5(11)6(12)7(2)16-17(13,14)15/h2-12H,1H2,(H,13,14,15)/t2-,3+,4+,5-,6+,7+/m1/s1" 
HF8 InChIKey         InChI                1.03  PDBNIRCVRHFXAD-ADTCQYHUSA-N                                                                                       
HF8 SMILES_CANONICAL CACTVS               3.385 "OC[C@@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](O)[C@H]1O[S](O)(=O)=O"                                                   
HF8 SMILES           CACTVS               3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O[S](O)(=O)=O"                                                           
HF8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H]([C@H]1OS(=O)(=O)O)O)O)O)O)O"                                                 
HF8 SMILES           "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(C1OS(=O)(=O)O)O)O)O)O)O"                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           HF8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HF8 "Create component"   2018-12-04 EBI  
HF8 "Other modification" 2018-12-10 EBI  
HF8 "Initial release"    2019-10-09 RCSB 
HF8 "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            HF8 
_pdbx_chem_comp_pcm.modified_residue_id                ASP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C5 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OD2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
