data_ED9
# 
_chem_comp.id                                    ED9 
_chem_comp.name                                  "(1R,2R,3R,5Z,7E,14beta,17alpha)-2-(3-hydroxypropoxy)-9,10-secocholesta-5,7,10-triene-1,3,25-triol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H50 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-08-18 
_chem_comp.pdbx_modified_date                    2014-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        490.715 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ED9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WGP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ED9 O2  O2  O 0 1 N N N 16.899 17.677 34.260 -6.065  -0.896 -2.831 O2  ED9 1  
ED9 O3  O3  O 0 1 N N N 4.381  26.501 34.643 8.992   1.466  -1.295 O3  ED9 2  
ED9 C1  C1  C 0 1 N N R 14.098 17.651 35.198 -3.828  1.353  -0.817 C1  ED9 3  
ED9 C2  C2  C 0 1 N N R 14.681 16.646 34.179 -5.133  0.836  -1.430 C2  ED9 4  
ED9 C3  C3  C 0 1 N N R 15.840 17.307 33.337 -4.881  -0.495 -2.139 C3  ED9 5  
ED9 C4  C4  C 0 1 N N N 15.327 18.605 32.578 -4.505  -1.567 -1.111 C4  ED9 6  
ED9 C5  C5  C 0 1 N N N 14.546 19.574 33.450 -3.280  -1.094 -0.354 C5  ED9 7  
ED9 C6  C6  C 0 1 N N N 14.608 20.870 33.363 -2.225  -1.905 -0.138 C6  ED9 8  
ED9 C7  C7  C 0 1 N N N 13.915 21.944 34.132 -1.059  -1.411 0.599  C7  ED9 9  
ED9 C8  C8  C 0 1 N N N 13.740 23.158 33.691 -0.016  -2.213 0.812  C8  ED9 10 
ED9 C9  C9  C 0 1 N N N 14.192 23.638 32.238 0.024   -3.649 0.310  C9  ED9 11 
ED9 C10 C10 C 0 1 N N N 13.572 18.905 34.456 -3.299  0.301  0.138  C10 ED9 12 
ED9 C11 C11 C 0 1 N N N 12.928 24.187 31.353 1.325   -3.922 -0.443 C11 ED9 13 
ED9 C12 C12 C 0 1 N N N 12.051 25.175 32.261 2.553   -3.441 0.348  C12 ED9 14 
ED9 C13 C13 C 0 1 N N R 11.642 24.601 33.748 2.392   -1.958 0.584  C13 ED9 15 
ED9 C14 C14 C 0 1 N N S 13.024 24.226 34.476 1.204   -1.763 1.559  C14 ED9 16 
ED9 C15 C15 C 0 1 N N N 12.453 23.868 35.998 1.312   -0.266 1.860  C15 ED9 17 
ED9 C16 C16 C 0 1 N N N 11.314 24.946 36.161 2.843   -0.060 2.034  C16 ED9 18 
ED9 C17 C17 C 0 1 N N R 11.152 25.632 34.763 3.527   -1.207 1.262  C17 ED9 19 
ED9 C18 C18 C 0 1 N N N 10.683 23.258 33.467 2.067   -1.268 -0.743 C18 ED9 20 
ED9 C19 C19 C 0 1 N N N 12.332 19.332 34.621 -2.870  0.617  1.360  C19 ED9 21 
ED9 C20 C20 C 0 1 N N R 9.732  26.193 34.328 4.482   -0.630 0.215  C20 ED9 22 
ED9 C21 C21 C 0 1 N N N 9.578  27.623 35.045 5.177   -1.773 -0.527 C21 ED9 23 
ED9 C22 C22 C 0 1 N N N 8.505  25.409 34.851 5.532   0.241  0.908  C22 ED9 24 
ED9 C23 C23 C 0 1 N N N 7.226  25.757 34.064 6.411   0.917  -0.146 C23 ED9 25 
ED9 C24 C24 C 0 1 N N N 6.102  24.877 34.298 7.461   1.788  0.547  C24 ED9 26 
ED9 C25 C25 C 0 1 N N N 4.724  25.348 33.923 8.339   2.464  -0.507 C25 ED9 27 
ED9 C26 C26 C 0 1 N N N 4.751  25.608 32.436 9.389   3.335  0.186  C26 ED9 28 
ED9 C27 C27 C 0 1 N N N 3.640  24.256 34.269 7.469   3.338  -1.412 C27 ED9 29 
ED9 O1  O1  O 0 1 N N N 13.100 17.019 36.039 -2.870  1.590  -1.851 O1  ED9 30 
ED9 O4  O4  O 0 1 N N N 15.210 15.540 34.916 -6.102  0.649  -0.397 O4  ED9 31 
ED9 C28 C28 C 0 1 N N N 15.418 14.327 34.041 -6.906  1.801  -0.138 C28 ED9 32 
ED9 C29 C29 C 0 1 N N N 14.096 13.578 34.088 -7.903  1.487  0.980  C29 ED9 33 
ED9 C30 C30 C 0 1 N N N 14.283 12.558 35.198 -8.764  2.721  1.257  C30 ED9 34 
ED9 O5  O5  O 0 1 N N N 13.021 12.274 35.786 -9.694  2.427  2.301  O5  ED9 35 
ED9 H1  H1  H 0 1 N N N 17.208 16.903 34.715 -5.979  -1.735 -3.305 H1  ED9 36 
ED9 H2  H2  H 0 1 N N N 4.373  26.304 35.572 9.563   0.874  -0.785 H2  ED9 37 
ED9 H3  H3  H 0 1 N N N 14.929 17.981 35.839 -4.018  2.279  -0.274 H3  ED9 38 
ED9 H4  H4  H 0 1 N N N 13.885 16.318 33.494 -5.508  1.564  -2.150 H4  ED9 39 
ED9 H5  H5  H 0 1 N N N 16.205 16.581 32.596 -4.066  -0.377 -2.853 H5  ED9 40 
ED9 H6  H6  H 0 1 N N N 16.202 19.135 32.173 -5.332  -1.716 -0.416 H6  ED9 41 
ED9 H7  H7  H 0 1 N N N 14.676 18.285 31.751 -4.281  -2.503 -1.622 H7  ED9 42 
ED9 H8  H8  H 0 1 N N N 15.280 21.233 32.599 -2.239  -2.920 -0.508 H8  ED9 43 
ED9 H9  H9  H 0 1 N N N 13.535 21.701 35.113 -1.045  -0.396 0.969  H9  ED9 44 
ED9 H10 H10 H 0 1 N N N 14.653 22.790 31.711 -0.048  -4.328 1.159  H10 ED9 45 
ED9 H11 H11 H 0 1 N N N 14.929 24.447 32.345 -0.820  -3.819 -0.359 H11 ED9 46 
ED9 H12 H12 H 0 1 N N N 13.302 24.729 30.472 1.414   -4.993 -0.621 H12 ED9 47 
ED9 H13 H13 H 0 1 N N N 12.309 23.338 31.026 1.295   -3.405 -1.402 H13 ED9 48 
ED9 H14 H14 H 0 1 N N N 12.625 26.103 32.403 2.606   -3.964 1.303  H14 ED9 49 
ED9 H15 H15 H 0 1 N N N 11.121 25.398 31.717 3.460   -3.628 -0.228 H15 ED9 50 
ED9 H16 H16 H 0 1 N N N 13.647 25.130 34.546 1.344   -2.357 2.463  H16 ED9 51 
ED9 H17 H17 H 0 1 N N N 12.050 22.846 36.047 0.935   0.324  1.025  H17 ED9 52 
ED9 H18 H18 H 0 1 N N N 13.236 23.990 36.761 0.782   -0.018 2.780  H18 ED9 53 
ED9 H19 H19 H 0 1 N N N 11.600 25.690 36.919 3.141   0.905  1.624  H19 ED9 54 
ED9 H20 H20 H 0 1 N N N 10.372 24.462 36.459 3.112   -0.117 3.089  H20 ED9 55 
ED9 H21 H21 H 0 1 N N N 11.851 26.481 34.737 4.064   -1.867 1.943  H21 ED9 56 
ED9 H22 H22 H 0 1 N N N 10.372 22.821 34.428 1.089   -1.595 -1.093 H22 ED9 57 
ED9 H23 H23 H 0 1 N N N 9.792  23.557 32.895 2.058   -0.187 -0.598 H23 ED9 58 
ED9 H24 H24 H 0 1 N N N 11.254 22.513 32.894 2.824   -1.528 -1.483 H24 ED9 59 
ED9 H25 H25 H 0 1 N N N 11.663 18.804 35.284 -2.498  -0.154 2.018  H25 ED9 60 
ED9 H26 H26 H 0 1 N N N 11.988 20.209 34.093 -2.895  1.644  1.692  H26 ED9 61 
ED9 H27 H27 H 0 1 N N N 9.686  26.311 33.235 3.920   -0.024 -0.495 H27 ED9 62 
ED9 H28 H28 H 0 1 N N N 8.606  28.064 34.779 5.684   -2.417 0.191  H28 ED9 63 
ED9 H29 H29 H 0 1 N N N 9.636  27.494 36.136 4.435   -2.354 -1.075 H29 ED9 64 
ED9 H30 H30 H 0 1 N N N 10.387 28.290 34.711 5.906   -1.363 -1.225 H30 ED9 65 
ED9 H31 H31 H 0 1 N N N 8.349  25.657 35.911 5.034   1.002  1.509  H31 ED9 66 
ED9 H32 H32 H 0 1 N N N 8.702  24.331 34.752 6.153   -0.382 1.553  H32 ED9 67 
ED9 H33 H33 H 0 1 N N N 7.467  25.724 32.991 6.909   0.156  -0.747 H33 ED9 68 
ED9 H34 H34 H 0 1 N N N 6.085  24.653 35.375 6.963   2.549  1.148  H34 ED9 69 
ED9 H35 H35 H 0 1 N N N 5.511  26.371 32.210 8.892   4.096  0.786  H35 ED9 70 
ED9 H36 H36 H 0 1 N N N 4.998  24.677 31.905 10.010  2.712  0.830  H36 ED9 71 
ED9 H37 H37 H 0 1 N N N 3.764  25.966 32.109 10.015  3.816  -0.566 H37 ED9 72 
ED9 H38 H38 H 0 1 N N N 3.632  24.077 35.354 6.971   4.100  -0.812 H38 ED9 73 
ED9 H39 H39 H 0 1 N N N 2.649  24.609 33.948 8.094   3.820  -2.163 H39 ED9 74 
ED9 H40 H40 H 0 1 N N N 3.883  23.320 33.745 6.721   2.718  -1.906 H40 ED9 75 
ED9 H41 H41 H 0 1 N N N 12.757 17.655 36.656 -2.017  1.911  -1.530 H41 ED9 76 
ED9 H42 H42 H 0 1 N N N 16.232 13.701 34.435 -6.267  2.629  0.167  H42 ED9 77 
ED9 H43 H43 H 0 1 N N N 15.655 14.630 33.010 -7.450  2.075  -1.042 H43 ED9 78 
ED9 H44 H44 H 0 1 N N N 13.268 14.263 34.323 -8.542  0.659  0.675  H44 ED9 79 
ED9 H45 H45 H 0 1 N N N 13.897 13.078 33.129 -7.359  1.213  1.884  H45 ED9 80 
ED9 H46 H46 H 0 1 N N N 14.711 11.635 34.781 -8.125  3.549  1.562  H46 ED9 81 
ED9 H47 H47 H 0 1 N N N 14.962 12.965 35.962 -9.307  2.995  0.353  H47 ED9 82 
ED9 H48 H48 H 0 1 N N N 13.131 11.636 36.481 -10.274 3.166  2.530  H48 ED9 83 
ED9 H49 H49 H 0 1 N N N 6.923  26.778 34.341 5.791   1.540  -0.790 H49 ED9 84 
ED9 H50 H50 H 0 1 N N N 6.292  23.952 33.734 8.081   1.165  1.191  H50 ED9 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ED9 C11 C9  SING N N 1  
ED9 C11 C12 SING N N 2  
ED9 C9  C8  SING N N 3  
ED9 C12 C13 SING N N 4  
ED9 C26 C25 SING N N 5  
ED9 C4  C3  SING N N 6  
ED9 C4  C5  SING N N 7  
ED9 C3  C2  SING N N 8  
ED9 C3  O2  SING N N 9  
ED9 C6  C5  DOUB N Z 10 
ED9 C6  C7  SING N N 11 
ED9 C5  C10 SING N N 12 
ED9 C18 C13 SING N N 13 
ED9 C8  C7  DOUB N E 14 
ED9 C8  C14 SING N N 15 
ED9 C13 C14 SING N N 16 
ED9 C13 C17 SING N N 17 
ED9 C25 C27 SING N N 18 
ED9 C25 C24 SING N N 19 
ED9 C25 O3  SING N N 20 
ED9 C28 C29 SING N N 21 
ED9 C28 O4  SING N N 22 
ED9 C23 C24 SING N N 23 
ED9 C23 C22 SING N N 24 
ED9 C29 C30 SING N N 25 
ED9 C2  O4  SING N N 26 
ED9 C2  C1  SING N N 27 
ED9 C20 C17 SING N N 28 
ED9 C20 C22 SING N N 29 
ED9 C20 C21 SING N N 30 
ED9 C10 C19 DOUB N N 31 
ED9 C10 C1  SING N N 32 
ED9 C14 C15 SING N N 33 
ED9 C17 C16 SING N N 34 
ED9 C30 O5  SING N N 35 
ED9 C1  O1  SING N N 36 
ED9 C15 C16 SING N N 37 
ED9 O2  H1  SING N N 38 
ED9 O3  H2  SING N N 39 
ED9 C1  H3  SING N N 40 
ED9 C2  H4  SING N N 41 
ED9 C3  H5  SING N N 42 
ED9 C4  H6  SING N N 43 
ED9 C4  H7  SING N N 44 
ED9 C6  H8  SING N N 45 
ED9 C7  H9  SING N N 46 
ED9 C9  H10 SING N N 47 
ED9 C9  H11 SING N N 48 
ED9 C11 H12 SING N N 49 
ED9 C11 H13 SING N N 50 
ED9 C12 H14 SING N N 51 
ED9 C12 H15 SING N N 52 
ED9 C14 H16 SING N N 53 
ED9 C15 H17 SING N N 54 
ED9 C15 H18 SING N N 55 
ED9 C16 H19 SING N N 56 
ED9 C16 H20 SING N N 57 
ED9 C17 H21 SING N N 58 
ED9 C18 H22 SING N N 59 
ED9 C18 H23 SING N N 60 
ED9 C18 H24 SING N N 61 
ED9 C19 H25 SING N N 62 
ED9 C19 H26 SING N N 63 
ED9 C20 H27 SING N N 64 
ED9 C21 H28 SING N N 65 
ED9 C21 H29 SING N N 66 
ED9 C21 H30 SING N N 67 
ED9 C22 H31 SING N N 68 
ED9 C22 H32 SING N N 69 
ED9 C23 H33 SING N N 70 
ED9 C24 H34 SING N N 71 
ED9 C26 H35 SING N N 72 
ED9 C26 H36 SING N N 73 
ED9 C26 H37 SING N N 74 
ED9 C27 H38 SING N N 75 
ED9 C27 H39 SING N N 76 
ED9 C27 H40 SING N N 77 
ED9 O1  H41 SING N N 78 
ED9 C28 H42 SING N N 79 
ED9 C28 H43 SING N N 80 
ED9 C29 H44 SING N N 81 
ED9 C29 H45 SING N N 82 
ED9 C30 H46 SING N N 83 
ED9 C30 H47 SING N N 84 
ED9 O5  H48 SING N N 85 
ED9 C23 H49 SING N N 86 
ED9 C24 H50 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ED9 SMILES           ACDLabs              12.01 "O(CCCO)C3C(O)C(\C(=C/C=C1\CCCC2(C)C(C(C)CCCC(O)(C)C)CCC12)CC3O)=C" 
ED9 InChI            InChI                1.03  
"InChI=1S/C30H50O5/c1-20(9-6-15-29(3,4)34)24-13-14-25-22(10-7-16-30(24,25)5)11-12-23-19-26(32)28(27(33)21(23)2)35-18-8-17-31/h11-12,20,24-28,31-34H,2,6-10,13-19H2,1,3-5H3/b22-11+,23-12-/t20-,24-,25+,26-,27-,28-,30-/m1/s1" 
ED9 InChIKey         InChI                1.03  FZEXGDDBXLBRTD-AYIMTCTASA-N 
ED9 SMILES_CANONICAL CACTVS               3.385 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@H]2C(\CCC[C@]12C)=C\C=C3\C[C@@H](O)[C@@H](OCCCO)[C@H](O)C3=C" 
ED9 SMILES           CACTVS               3.385 "C[CH](CCCC(C)(C)O)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)[CH](OCCCO)[CH](O)C3=C" 
ED9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C/3\C[C@H]([C@H]([C@@H](C3=C)O)OCCCO)O)C" 
ED9 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(CCCC(C)(C)O)C1CCC2C1(CCCC2=CC=C3CC(C(C(C3=C)O)OCCCO)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ED9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2R,3R,5Z,7E,14beta,17alpha)-2-(3-hydroxypropoxy)-9,10-secocholesta-5,7,10-triene-1,3,25-triol"                                                                                                      
ED9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,2R,3R,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-2-(3-oxidanylpropoxy)cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ED9 "Create component" 2014-08-18 PDBJ 
ED9 "Initial release"  2014-08-27 RCSB 
# 
