data_K69
# 
_chem_comp.id                                    K69 
_chem_comp.name                                  "1,3-dimethyl-5-[(6-morpholin-4-ylpyrimidin-4-yl)amino]benzimidazol-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H20 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-05-19 
_chem_comp.pdbx_modified_date                    2022-11-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        340.380 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     K69 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7ZWW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
K69 N3  N1  N 0 1 Y N N -26.626 9.825  11.538 3.127  -1.411 -0.739 N3  K69 1  
K69 C16 C1  C 0 1 Y N N -23.525 9.172  18.290 -3.869 -0.649 0.362  C16 K69 2  
K69 C14 C2  C 0 1 Y N N -25.145 8.673  16.618 -1.504 -0.874 0.672  C14 K69 3  
K69 C12 C3  C 0 1 N N N -24.650 6.027  11.872 6.466  1.349  1.013  C12 K69 4  
K69 C9  C4  C 0 1 Y N N -27.440 10.608 12.243 1.885  -1.848 -0.790 C9  K69 5  
K69 C15 C5  C 0 1 Y N N -24.181 8.232  17.510 -2.772 -1.418 0.720  C15 K69 6  
K69 N2  N2  N 0 1 N N N -26.374 10.505 15.568 -0.035 0.990  0.223  N2  K69 7  
K69 C13 C6  C 0 1 N N N -24.052 7.366  12.201 5.034  0.807  1.018  C13 K69 8  
K69 C11 C7  C 0 1 N N N -25.534 6.816  9.873  7.071  -0.213 -0.700 C11 K69 9  
K69 C10 C8  C 0 1 N N N -24.979 8.194  10.106 5.645  -0.770 -0.712 C10 K69 10 
K69 C8  C9  C 0 1 Y N N -25.663 9.234  12.242 3.397  -0.160 -0.369 C8  K69 11 
K69 O1  O1  O 0 1 N N N -24.719 5.816  10.469 7.361  0.312  0.599  O1  K69 12 
K69 N1  N3  N 0 1 N N N -23.002 11.194 19.068 -4.956 1.184  -0.326 N1  K69 13 
K69 C7  C10 C 0 1 Y N N -25.518 9.421  13.613 2.344  0.687  -0.034 C7  K69 14 
K69 C3  C11 C 0 1 Y N N -23.833 10.516 18.185 -3.691 0.677  -0.039 C3  K69 15 
K69 C1  C12 C 0 1 N N N -22.175 10.304 19.714 -5.862 0.211  -0.115 C1  K69 16 
K69 C2  C13 C 0 1 N N N -22.993 12.631 19.305 -5.250 2.543  -0.789 C2  K69 17 
K69 C4  C14 C 0 1 Y N N -24.794 10.966 17.299 -2.417 1.221  -0.085 C4  K69 18 
K69 C5  C15 C 0 1 Y N N -25.447 10.029 16.505 -1.323 0.444  0.269  C5  K69 19 
K69 C6  C16 C 0 1 Y N N -26.440 10.267 14.220 1.048  0.186  -0.101 C6  K69 20 
K69 N5  N4  N 0 1 N N N -24.814 8.427  11.541 4.706  0.291  -0.318 N5  K69 21 
K69 N4  N5  N 0 1 Y N N -27.419 10.871 13.548 0.862  -1.077 -0.480 N4  K69 22 
K69 O   O2  O 0 1 N N N -21.311 10.565 20.525 -7.062 0.323  -0.282 O   K69 23 
K69 N   N6  N 0 1 N N N -22.509 9.059  19.232 -5.239 -0.906 0.306  N   K69 24 
K69 C   C17 C 0 1 N N N -21.873 7.822  19.666 -5.888 -2.174 0.648  C   K69 25 
K69 H1  H1  H 0 1 N N N -25.669 7.957  16.002 -0.650 -1.474 0.951  H1  K69 26 
K69 H2  H2  H 0 1 N N N -25.666 5.977  12.291 6.536  2.188  0.322  H2  K69 27 
K69 H3  H3  H 0 1 N N N -24.029 5.238  12.322 6.734  1.681  2.017  H3  K69 28 
K69 H4  H4  H 0 1 N N N -28.223 11.095 11.681 1.700  -2.867 -1.094 H4  K69 29 
K69 H5  H5  H 0 1 N N N -23.946 7.181  17.596 -2.909 -2.442 1.035  H5  K69 30 
K69 H6  H6  H 0 1 N N N -27.088 11.102 15.934 0.101  1.931  0.417  H6  K69 31 
K69 H7  H7  H 0 1 N N N -23.009 7.395  11.853 4.952  0.003  1.750  H7  K69 32 
K69 H8  H8  H 0 1 N N N -24.080 7.520  13.290 4.343  1.609  1.280  H8  K69 33 
K69 H9  H9  H 0 1 N N N -26.543 6.760  10.307 7.775  -1.010 -0.935 H9  K69 34 
K69 H10 H10 H 0 1 N N N -25.590 6.632  8.790  7.158  0.581  -1.441 H10 K69 35 
K69 H11 H11 H 0 1 N N N -24.003 8.283  9.607  5.399  -1.119 -1.715 H11 K69 36 
K69 H12 H12 H 0 1 N N N -25.672 8.941  9.692  5.572  -1.599 -0.009 H12 K69 37 
K69 H13 H13 H 0 1 N N N -24.733 8.936  14.175 2.529  1.707  0.271  H13 K69 38 
K69 H14 H14 H 0 1 N N N -22.228 12.874 20.057 -6.324 2.650  -0.940 H14 K69 39 
K69 H15 H15 H 0 1 N N N -22.764 13.156 18.366 -4.914 3.261  -0.041 H15 K69 40 
K69 H16 H16 H 0 1 N N N -23.981 12.948 19.671 -4.730 2.726  -1.729 H16 K69 41 
K69 H17 H17 H 0 1 N N N -25.031 12.017 17.225 -2.276 2.246  -0.395 H17 K69 42 
K69 H18 H18 H 0 1 N N N -21.105 8.049  20.420 -6.148 -2.175 1.707  H18 K69 43 
K69 H19 H19 H 0 1 N N N -22.630 7.155  20.103 -6.794 -2.290 0.052  H19 K69 44 
K69 H20 H20 H 0 1 N N N -21.404 7.328  18.802 -5.207 -2.999 0.439  H20 K69 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
K69 C11 C10 SING N N 1  
K69 C11 O1  SING N N 2  
K69 C10 N5  SING N N 3  
K69 O1  C12 SING N N 4  
K69 N3  C8  DOUB Y N 5  
K69 N3  C9  SING Y N 6  
K69 N5  C13 SING N N 7  
K69 N5  C8  SING N N 8  
K69 C12 C13 SING N N 9  
K69 C8  C7  SING Y N 10 
K69 C9  N4  DOUB Y N 11 
K69 N4  C6  SING Y N 12 
K69 C7  C6  DOUB Y N 13 
K69 C6  N2  SING N N 14 
K69 N2  C5  SING N N 15 
K69 C5  C14 DOUB Y N 16 
K69 C5  C4  SING Y N 17 
K69 C14 C15 SING Y N 18 
K69 C4  C3  DOUB Y N 19 
K69 C15 C16 DOUB Y N 20 
K69 C3  C16 SING Y N 21 
K69 C3  N1  SING N N 22 
K69 C16 N   SING N N 23 
K69 N1  C2  SING N N 24 
K69 N1  C1  SING N N 25 
K69 N   C   SING N N 26 
K69 N   C1  SING N N 27 
K69 C1  O   DOUB N N 28 
K69 C14 H1  SING N N 29 
K69 C12 H2  SING N N 30 
K69 C12 H3  SING N N 31 
K69 C9  H4  SING N N 32 
K69 C15 H5  SING N N 33 
K69 N2  H6  SING N N 34 
K69 C13 H7  SING N N 35 
K69 C13 H8  SING N N 36 
K69 C11 H9  SING N N 37 
K69 C11 H10 SING N N 38 
K69 C10 H11 SING N N 39 
K69 C10 H12 SING N N 40 
K69 C7  H13 SING N N 41 
K69 C2  H14 SING N N 42 
K69 C2  H15 SING N N 43 
K69 C2  H16 SING N N 44 
K69 C4  H17 SING N N 45 
K69 C   H18 SING N N 46 
K69 C   H19 SING N N 47 
K69 C   H20 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
K69 InChI            InChI                1.06  "InChI=1S/C17H20N6O2/c1-21-13-4-3-12(9-14(13)22(2)17(21)24)20-15-10-16(19-11-18-15)23-5-7-25-8-6-23/h3-4,9-11H,5-8H2,1-2H3,(H,18,19,20)" 
K69 InChIKey         InChI                1.06  VTZPEUOJZAUNMQ-UHFFFAOYSA-N                                                                                                              
K69 SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)N(C)c2cc(Nc3cc(ncn3)N4CCOCC4)ccc12"                                                                                             
K69 SMILES           CACTVS               3.385 "CN1C(=O)N(C)c2cc(Nc3cc(ncn3)N4CCOCC4)ccc12"                                                                                             
K69 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2ccc(cc2N(C1=O)C)Nc3cc(ncn3)N4CCOCC4"                                                                                               
K69 SMILES           "OpenEye OEToolkits" 2.0.7 "CN1c2ccc(cc2N(C1=O)C)Nc3cc(ncn3)N4CCOCC4"                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           K69 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1,3-dimethyl-5-[(6-morpholin-4-ylpyrimidin-4-yl)amino]benzimidazol-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
K69 "Create component"  2022-05-19 PDBE 
K69 "Modify descriptor" 2022-08-22 RCSB 
K69 "Initial release"   2022-11-16 RCSB 
# 
