data_KT9
# 
_chem_comp.id                                    KT9 
_chem_comp.name                                  "N-(3-methyl-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyrimidin-5-yl)acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H16 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-14 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        312.323 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KT9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GBD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KT9 N1  N1  N 0 1 Y N N N N N 5.361  1.614  18.781 6.251  -0.148 -0.110 N1  KT9 1  
KT9 N3  N2  N 0 1 N N N N N N 13.205 4.205  21.280 -4.216 1.587  0.482  N3  KT9 2  
KT9 C4  C1  C 0 1 N N N N N N 9.085  0.111  20.937 1.860  0.270  -0.587 C4  KT9 3  
KT9 C5  C2  C 0 1 N N N N N N 7.793  -0.612 20.606 2.931  1.135  -1.200 C5  KT9 4  
KT9 C6  C3  C 0 1 Y N N N N N 6.992  0.001  19.479 4.219  0.956  -0.437 C6  KT9 5  
KT9 C7  C4  C 0 1 Y N N N N N 5.937  0.862  19.726 5.131  -0.021 -0.803 C7  KT9 6  
KT9 C8  C5  C 0 1 Y N N N N N 5.882  1.492  17.556 6.503  0.640  0.916  C8  KT9 7  
KT9 C10 C6  C 0 1 Y N N N N N 11.644 1.023  22.317 -1.683 -0.239 -0.574 C10 KT9 8  
KT9 C13 C7  C 0 1 N N N N N N 13.688 4.845  23.196 -5.765 0.804  -0.648 C13 KT9 9  
KT9 C15 C8  C 0 1 Y N N N N N 13.886 0.277  22.801 -2.251 -2.367 0.383  C15 KT9 10 
KT9 N   N3  N 0 1 N N N N N N 9.953  -0.620 21.670 0.617  0.267  -1.107 N   KT9 11 
KT9 N2  N4  N 0 1 Y N N N N N 6.913  0.722  17.197 5.660  1.579  1.293  N2  KT9 12 
KT9 C1  C9  C 0 1 Y N N N N N 13.524 -1.039 22.543 -0.921 -2.739 0.352  C1  KT9 13 
KT9 C11 C10 C 0 1 Y N N N N N 12.949 1.292  22.688 -2.635 -1.116 -0.080 C11 KT9 14 
KT9 O1  O1  O 0 1 N N N N N N 13.477 2.523  23.012 -3.944 -0.752 -0.049 O1  KT9 15 
KT9 C2  C11 C 0 1 Y N N N N N 12.215 -1.308 22.164 0.030  -1.871 -0.150 C2  KT9 16 
KT9 C9  C12 C 0 1 Y N N N N N 7.448  -0.020 18.173 4.519  1.765  0.647  C9  KT9 17 
KT9 C12 C13 C 0 1 N N S N N N 12.812 3.729  22.607 -4.267 0.550  -0.541 C12 KT9 18 
KT9 C14 C14 C 0 1 N N N N N N 13.882 5.271  21.749 -5.530 1.836  0.415  C14 KT9 19 
KT9 C   C15 C 0 1 N N N N N N 14.531 -2.156 22.682 -0.508 -4.098 0.856  C   KT9 20 
KT9 O   O2  O 0 1 N N N N N N 9.302  1.260  20.565 2.117  -0.423 0.375  O   KT9 21 
KT9 O2  O3  O 0 1 N N N N N N 14.430 6.213  21.176 -6.259 2.610  0.998  O2  KT9 22 
KT9 C3  C16 C 0 1 Y N N N N N 11.274 -0.290 22.051 -0.347 -0.616 -0.610 C3  KT9 23 
KT9 H1  H1  H 0 1 N N N N N N 13.033 3.862  20.357 -3.497 1.956  1.018  H1  KT9 24 
KT9 H2  H2  H 0 1 N N N N N N 7.164  -0.618 21.508 3.082  0.844  -2.240 H2  KT9 25 
KT9 H3  H3  H 0 1 N N N N N N 8.042  -1.646 20.325 2.625  2.180  -1.155 H3  KT9 26 
KT9 H4  H4  H 0 1 N N N N N N 5.559  0.931  20.735 4.931  -0.670 -1.643 H4  KT9 27 
KT9 H5  H5  H 0 1 N N N N N N 5.421  2.077  16.774 7.426  0.512  1.462  H5  KT9 28 
KT9 H6  H6  H 0 1 N N N N N N 10.922 1.822  22.235 -1.980 0.735  -0.935 H6  KT9 29 
KT9 H7  H7  H 0 1 N N N N N N 14.599 4.504  23.710 -6.077 1.219  -1.606 H7  KT9 30 
KT9 H8  H8  H 0 1 N N N N N N 13.158 5.570  23.831 -6.381 -0.035 -0.324 H8  KT9 31 
KT9 H9  H9  H 0 1 N N N N N N 14.900 0.510  23.090 -2.993 -3.051 0.768  H9  KT9 32 
KT9 H10 H10 H 0 1 N N N N N N 9.618  -1.509 21.983 0.391  0.877  -1.827 H10 KT9 33 
KT9 H11 H11 H 0 1 N N N N N N 11.923 -2.326 21.953 1.068  -2.168 -0.181 H11 KT9 34 
KT9 H12 H12 H 0 1 N N N N N N 8.277  -0.668 17.929 3.832  2.537  0.961  H12 KT9 35 
KT9 H13 H13 H 0 1 N N N N N N 11.742 3.807  22.851 -3.716 0.807  -1.446 H13 KT9 36 
KT9 H14 H14 H 0 1 N N N N N N 15.044 -2.310 21.721 -0.539 -4.814 0.035  H14 KT9 37 
KT9 H15 H15 H 0 1 N N N N N N 15.269 -1.890 23.453 0.506  -4.045 1.255  H15 KT9 38 
KT9 H16 H16 H 0 1 N N N N N N 14.014 -3.082 22.974 -1.191 -4.417 1.643  H16 KT9 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KT9 N2  C8  DOUB Y N 1  
KT9 N2  C9  SING Y N 2  
KT9 C8  N1  SING Y N 3  
KT9 C9  C6  DOUB Y N 4  
KT9 N1  C7  DOUB Y N 5  
KT9 C6  C7  SING Y N 6  
KT9 C6  C5  SING N N 7  
KT9 O   C4  DOUB N N 8  
KT9 C5  C4  SING N N 9  
KT9 C4  N   SING N N 10 
KT9 O2  C14 DOUB N N 11 
KT9 N3  C14 SING N N 12 
KT9 N3  C12 SING N N 13 
KT9 N   C3  SING N N 14 
KT9 C14 C13 SING N N 15 
KT9 C3  C2  DOUB Y N 16 
KT9 C3  C10 SING Y N 17 
KT9 C2  C1  SING Y N 18 
KT9 C10 C11 DOUB Y N 19 
KT9 C1  C   SING N N 20 
KT9 C1  C15 DOUB Y N 21 
KT9 C12 O1  SING N N 22 
KT9 C12 C13 SING N N 23 
KT9 C11 C15 SING Y N 24 
KT9 C11 O1  SING N N 25 
KT9 N3  H1  SING N N 26 
KT9 C5  H2  SING N N 27 
KT9 C5  H3  SING N N 28 
KT9 C7  H4  SING N N 29 
KT9 C8  H5  SING N N 30 
KT9 C10 H6  SING N N 31 
KT9 C13 H7  SING N N 32 
KT9 C13 H8  SING N N 33 
KT9 C15 H9  SING N N 34 
KT9 N   H10 SING N N 35 
KT9 C2  H11 SING N N 36 
KT9 C9  H12 SING N N 37 
KT9 C12 H13 SING N N 38 
KT9 C   H14 SING N N 39 
KT9 C   H15 SING N N 40 
KT9 C   H16 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KT9 SMILES           ACDLabs              12.01 "Cc1cc(cc(OC2CC(=O)N2)c1)NC(=O)Cc1cncnc1"                                                                                                          
KT9 InChI            InChI                1.06  "InChI=1S/C16H16N4O3/c1-10-2-12(5-13(3-10)23-16-6-15(22)20-16)19-14(21)4-11-7-17-9-18-8-11/h2-3,5,7-9,16H,4,6H2,1H3,(H,19,21)(H,20,22)/t16-/m0/s1" 
KT9 InChIKey         InChI                1.06  BBXRTGNKDKIMPV-INIZCTEOSA-N                                                                                                                        
KT9 SMILES_CANONICAL CACTVS               3.385 "Cc1cc(NC(=O)Cc2cncnc2)cc(O[C@H]3CC(=O)N3)c1"                                                                                                      
KT9 SMILES           CACTVS               3.385 "Cc1cc(NC(=O)Cc2cncnc2)cc(O[CH]3CC(=O)N3)c1"                                                                                                       
KT9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)O[C@H]2CC(=O)N2)NC(=O)Cc3cncnc3"                                                                                                      
KT9 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)OC2CC(=O)N2)NC(=O)Cc3cncnc3"                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KT9 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(3-methyl-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-2-(pyrimidin-5-yl)acetamide"                
KT9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[3-methyl-5-[(2~{S})-4-oxidanylideneazetidin-2-yl]oxy-phenyl]-2-pyrimidin-5-yl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KT9 "Create component" 2023-08-14 RCSB 
KT9 "Initial release"  2023-11-08 RCSB 
# 
