data_XP9
# 
_chem_comp.id                                    XP9 
_chem_comp.name                                  "O-phosphono-N-(9-sulfanylnonanoyl)-L-threonine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H26 N O7 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-03-12 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        371.387 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XP9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3M30 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XP9 C    C    C 0 1 N N N 23.247 39.118 -19.971 -3.347 -1.579 -0.412 C    XP9 1  
XP9 N    N    N 0 1 N N N 23.495 37.734 -18.031 -1.776 0.042  0.479  N    XP9 2  
XP9 O    O    O 0 1 N N N 24.477 39.406 -19.793 -4.398 -2.412 -0.349 O    XP9 3  
XP9 P    P    P 0 1 N N N 22.206 42.166 -17.736 -5.995 0.888  -0.488 P    XP9 4  
XP9 C1   C1   C 0 1 N N N 23.242 36.498 -17.602 -0.536 -0.479 0.565  C1   XP9 5  
XP9 O1   O1   O 0 1 N N N 22.143 35.932 -17.766 -0.385 -1.632 0.911  O1   XP9 6  
XP9 C2   C2   C 0 1 N N N 24.385 35.784 -16.904 0.663  0.371  0.232  C2   XP9 7  
XP9 C3   C3   C 0 1 N N N 24.148 34.260 -16.795 1.939  -0.455 0.411  C3   XP9 8  
XP9 C4   C4   C 0 1 N N N 25.386 33.467 -16.323 3.156  0.408  0.072  C4   XP9 9  
XP9 C5   C5   C 0 1 N N N 25.956 33.919 -14.976 4.432  -0.417 0.251  C5   XP9 10 
XP9 C6   C6   C 0 1 N N N 24.865 34.210 -13.898 5.649  0.445  -0.087 C6   XP9 11 
XP9 C7   C7   C 0 1 N N N 24.004 32.986 -13.552 6.925  -0.380 0.091  C7   XP9 12 
XP9 C8   C8   C 0 1 N N N 24.555 31.831 -12.677 8.142  0.482  -0.247 C8   XP9 13 
XP9 C9   C9   C 0 1 N N N 25.551 32.135 -11.549 9.418  -0.343 -0.068 C9   XP9 14 
XP9 S9   S9   S 0 1 N N N 26.331 30.558 -11.035 10.861 0.680  -0.469 S9   XP9 15 
XP9 CA   CA   C 0 1 N N S 22.501 38.496 -18.810 -2.942 -0.784 0.802  CA   XP9 16 
XP9 CB   CB   C 0 1 N N R 21.714 39.587 -18.072 -4.102 0.116  1.233  CB   XP9 17 
XP9 CG   CG   C 0 1 N N N 21.057 39.052 -16.775 -3.650 1.013  2.387  CG   XP9 18 
XP9 O1P  O1P  O 0 1 N N N 23.558 42.882 -17.528 -6.135 2.020  -1.625 O1P  XP9 19 
XP9 O2P  O2P  O 0 1 N N N 21.619 42.413 -19.095 -6.982 1.142  0.585  O2P  XP9 20 
XP9 O3P  O3P  O 0 1 N N N 21.250 42.416 -16.607 -6.267 -0.560 -1.136 O3P  XP9 21 
XP9 O4P  O4P  O 0 1 N N N 22.641 40.607 -17.653 -4.509 0.929  0.130  O4P  XP9 22 
XP9 OXT  OXT  O 0 1 N N N 22.609 39.327 -21.050 -2.723 -1.471 -1.441 OXT  XP9 23 
XP9 HN   HN   H 0 1 N N N 24.378 38.154 -17.820 -1.897 0.964  0.202  HN   XP9 24 
XP9 HO   HO   H 0 1 N N N 24.830 39.795 -20.585 -4.620 -2.900 -1.154 HO   XP9 25 
XP9 H2   H2   H 0 1 N N N 25.307 35.954 -17.480 0.592  0.711  -0.801 H2   XP9 26 
XP9 H2A  H2A  H 0 1 N N N 24.486 36.195 -15.889 0.693  1.234  0.897  H2A  XP9 27 
XP9 H3   H3   H 0 1 N N N 23.339 34.092 -16.069 2.010  -0.795 1.444  H3   XP9 28 
XP9 H3A  H3A  H 0 1 N N N 23.864 33.888 -17.790 1.909  -1.318 -0.255 H3A  XP9 29 
XP9 H4   H4   H 0 1 N N N 25.093 32.411 -16.227 3.085  0.748  -0.961 H4   XP9 30 
XP9 H4A  H4A  H 0 1 N N N 26.174 33.591 -17.080 3.186  1.271  0.738  H4A  XP9 31 
XP9 H5   H5   H 0 1 N N N 26.607 33.119 -14.595 4.503  -0.757 1.284  H5   XP9 32 
XP9 H5A  H5A  H 0 1 N N N 26.528 34.844 -15.141 4.402  -1.281 -0.414 H5A  XP9 33 
XP9 H6   H6   H 0 1 N N N 25.371 34.544 -12.980 5.578  0.785  -1.120 H6   XP9 34 
XP9 H6A  H6A  H 0 1 N N N 24.202 34.997 -14.286 5.679  1.308  0.578  H6A  XP9 35 
XP9 H7   H7   H 0 1 N N N 23.132 33.380 -13.009 6.996  -0.720 1.125  H7   XP9 36 
XP9 H7A  H7A  H 0 1 N N N 23.739 32.528 -14.516 6.895  -1.243 -0.574 H7A  XP9 37 
XP9 H8   H8   H 0 1 N N N 23.681 31.367 -12.197 8.071  0.822  -1.280 H8   XP9 38 
XP9 H8A  H8A  H 0 1 N N N 25.072 31.146 -13.365 8.172  1.345  0.418  H8A  XP9 39 
XP9 H9   H9   H 0 1 N N N 26.321 32.834 -11.907 9.489  -0.683 0.965  H9   XP9 40 
XP9 H9A  H9A  H 0 1 N N N 25.024 32.588 -10.696 9.388  -1.206 -0.734 H9A  XP9 41 
XP9 HS9  HS9  H 0 1 N N N 27.137 30.949 -10.093 11.892 -0.161 -0.272 HS9  XP9 42 
XP9 HA   HA   H 0 1 N N N 21.722 37.775 -19.098 -2.690 -1.466 1.615  HA   XP9 43 
XP9 HB   HB   H 0 1 N N N 20.938 39.956 -18.758 -4.939 -0.501 1.558  HB   XP9 44 
XP9 HG   HG   H 0 1 N N N 20.505 39.865 -16.280 -2.812 1.630  2.062  HG   XP9 45 
XP9 HGA  HGA  H 0 1 N N N 20.362 38.237 -17.025 -4.476 1.654  2.694  HGA  XP9 46 
XP9 HGB  HGB  H 0 1 N N N 21.837 38.674 -16.098 -3.339 0.393  3.228  HGB  XP9 47 
XP9 HO1P HO1P H 0 0 N N N 23.786 43.364 -18.314 -7.007 2.053  -2.041 HO1P XP9 48 
XP9 HO3P HO3P H 0 0 N N N 20.412 42.696 -16.957 -5.656 -0.794 -1.848 HO3P XP9 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XP9 OXT C    DOUB N N 1  
XP9 C   O    SING N N 2  
XP9 C   CA   SING N N 3  
XP9 CA  N    SING N N 4  
XP9 N   C1   SING N N 5  
XP9 N   HN   SING N N 6  
XP9 O   HO   SING N N 7  
XP9 O2P P    DOUB N N 8  
XP9 P   O4P  SING N N 9  
XP9 P   O1P  SING N N 10 
XP9 P   O3P  SING N N 11 
XP9 O1  C1   DOUB N N 12 
XP9 C1  C2   SING N N 13 
XP9 C2  C3   SING N N 14 
XP9 C2  H2   SING N N 15 
XP9 C2  H2A  SING N N 16 
XP9 C3  C4   SING N N 17 
XP9 C3  H3   SING N N 18 
XP9 C3  H3A  SING N N 19 
XP9 C4  C5   SING N N 20 
XP9 C4  H4   SING N N 21 
XP9 C4  H4A  SING N N 22 
XP9 C5  C6   SING N N 23 
XP9 C5  H5   SING N N 24 
XP9 C5  H5A  SING N N 25 
XP9 C6  C7   SING N N 26 
XP9 C6  H6   SING N N 27 
XP9 C6  H6A  SING N N 28 
XP9 C7  C8   SING N N 29 
XP9 C7  H7   SING N N 30 
XP9 C7  H7A  SING N N 31 
XP9 C8  C9   SING N N 32 
XP9 C8  H8   SING N N 33 
XP9 C8  H8A  SING N N 34 
XP9 C9  S9   SING N N 35 
XP9 C9  H9   SING N N 36 
XP9 C9  H9A  SING N N 37 
XP9 S9  HS9  SING N N 38 
XP9 CA  CB   SING N N 39 
XP9 CA  HA   SING N N 40 
XP9 CB  O4P  SING N N 41 
XP9 CB  CG   SING N N 42 
XP9 CB  HB   SING N N 43 
XP9 CG  HG   SING N N 44 
XP9 CG  HGA  SING N N 45 
XP9 CG  HGB  SING N N 46 
XP9 O1P HO1P SING N N 47 
XP9 O3P HO3P SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XP9 SMILES           ACDLabs              12.01 "O=C(O)C(NC(=O)CCCCCCCCS)C(OP(=O)(O)O)C"                                                                                                                
XP9 SMILES_CANONICAL CACTVS               3.370 "C[C@@H](O[P](O)(O)=O)[C@H](NC(=O)CCCCCCCCS)C(O)=O"                                                                                                     
XP9 SMILES           CACTVS               3.370 "C[CH](O[P](O)(O)=O)[CH](NC(=O)CCCCCCCCS)C(O)=O"                                                                                                        
XP9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]([C@@H](C(=O)O)NC(=O)CCCCCCCCS)OP(=O)(O)O"                                                                                                       
XP9 SMILES           "OpenEye OEToolkits" 1.7.0 "CC(C(C(=O)O)NC(=O)CCCCCCCCS)OP(=O)(O)O"                                                                                                                
XP9 InChI            InChI                1.03  "InChI=1S/C13H26NO7PS/c1-10(21-22(18,19)20)12(13(16)17)14-11(15)8-6-4-2-3-5-7-9-23/h10,12,23H,2-9H2,1H3,(H,14,15)(H,16,17)(H2,18,19,20)/t10-,12+/m1/s1" 
XP9 InChIKey         InChI                1.03  WUTPSGIFCCYDED-PWSUYJOCSA-N                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XP9 "SYSTEMATIC NAME" ACDLabs              12.01 "O-phosphono-N-(9-sulfanylnonanoyl)-L-threonine"                  
XP9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S,3R)-3-phosphonooxy-2-(9-sulfanylnonanoylamino)butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XP9 "Create component"  2010-03-12 RCSB 
XP9 "Modify descriptor" 2011-06-04 RCSB 
# 
