data_ZB9
# 
_chem_comp.id                                    ZB9 
_chem_comp.name                                  "2-(3,5-dichloroanilino)-1-{(3R)-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}ethan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H22 Cl2 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-08 
_chem_comp.pdbx_modified_date                    2023-03-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        433.334 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZB9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FLV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZB9 N1  N1  N  0 1 Y N N -15.339 5.596  -19.783 -3.629 0.961  -0.384 N1  ZB9 1  
ZB9 N3  N2  N  0 1 Y N N -17.999 4.917  -16.801 -7.483 2.107  0.144  N3  ZB9 2  
ZB9 C4  C1  C  0 1 Y N N -17.200 5.074  -17.899 -6.143 1.919  -0.057 C4  ZB9 3  
ZB9 C5  C2  C  0 1 Y N N -16.188 6.052  -16.114 -7.197 -0.091 0.279  C5  ZB9 4  
ZB9 C6  C3  C  0 1 Y N N -17.379 5.516  -15.727 -8.101 0.899  0.343  C6  ZB9 5  
ZB9 C7  C4  C  0 1 N N N -12.858 6.623  -19.348 -5.112 -2.039 -1.052 C7  ZB9 6  
ZB9 C8  C5  C  0 1 N N R -13.702 7.672  -17.264 -2.868 -1.525 -0.301 C8  ZB9 7  
ZB9 C10 C6  C  0 1 N N N -12.911 9.952  -16.549 -1.100 -3.285 -0.473 C10 ZB9 8  
ZB9 C13 C7  C  0 1 N N N -13.174 7.838  -13.910 0.298  -0.199 0.520  C13 ZB9 9  
ZB9 C15 C8  C  0 1 Y N N -13.176 7.613  -10.740 3.951  0.527  0.123  C15 ZB9 10 
ZB9 C17 C9  C  0 1 Y N N -11.683 5.852  -10.146 5.927  -0.821 -0.063 C17 ZB9 11 
ZB9 C20 C10 C  0 1 Y N N -13.807 7.482  -9.512  4.727  1.675  0.028  C20 ZB9 12 
ZB9 C1  C11 C  0 1 Y N N -16.471 4.915  -20.000 -3.900 2.252  -0.447 C1  ZB9 13 
ZB9 C11 C12 C  0 1 N N N -12.005 9.271  -15.542 -0.273 -2.578 0.606  C11 ZB9 14 
ZB9 C12 C13 C  0 1 N N N -12.777 7.057  -16.207 -2.061 -0.799 0.779  C12 ZB9 15 
ZB9 C14 C14 C  0 1 N N N -12.932 8.900  -12.852 1.748  -0.582 0.369  C14 ZB9 16 
ZB9 C16 C15 C  0 1 Y N N -12.096 6.800  -11.062 4.555  -0.722 0.077  C16 ZB9 17 
ZB9 C18 C16 C  0 1 Y N N -12.290 5.688  -8.918  6.698  0.325  -0.157 C18 ZB9 18 
ZB9 C19 C17 C  0 1 Y N N -13.356 6.515  -8.633  6.098  1.571  -0.112 C19 ZB9 19 
ZB9 C2  C18 C  0 1 Y N N -15.090 6.058  -18.534 -4.589 0.070  -0.155 C2  ZB9 20 
ZB9 C3  C19 C  0 1 Y N N -16.043 5.790  -17.513 -5.902 0.535  0.019  C3  ZB9 21 
ZB9 C9  C20 C  0 1 N N N -13.169 9.023  -17.734 -2.588 -3.027 -0.219 C9  ZB9 22 
ZB9 N2  N3  N  0 1 Y N N -17.441 4.624  -19.141 -5.115 2.733  -0.291 N2  ZB9 23 
ZB9 N4  N4  N  0 1 N N N -13.928 6.733  -18.370 -4.301 -1.281 -0.090 N4  ZB9 24 
ZB9 N5  N5  N  0 1 N N N -12.634 8.019  -15.118 -0.644 -1.156 0.631  N5  ZB9 25 
ZB9 N6  N6  N  0 1 N N N -13.606 8.565  -11.615 2.566  0.630  0.270  N6  ZB9 26 
ZB9 O1  O1  O  0 1 N N N -13.898 6.872  -13.664 -0.021 0.971  0.542  O1  ZB9 27 
ZB9 CL1 CL1 CL 0 0 N N N -14.152 6.341  -7.103  7.069  3.005  -0.230 CL1 ZB9 28 
ZB9 CL2 CL2 CL 0 0 N N N -10.348 4.815  -10.543 6.683  -2.382 -0.119 CL2 ZB9 29 
ZB9 H1  H1  H  0 1 N N N -18.882 4.448  -16.781 -7.930 2.967  0.145  H1  ZB9 30 
ZB9 H2  H2  H  0 1 N N N -15.485 6.576  -15.483 -7.389 -1.148 0.397  H2  ZB9 31 
ZB9 H3  H3  H  0 1 N N N -17.779 5.555  -14.724 -9.157 0.765  0.524  H3  ZB9 32 
ZB9 H4  H4  H  0 1 N N N -12.007 7.244  -19.032 -4.903 -1.686 -2.061 H4  ZB9 33 
ZB9 H5  H5  H  0 1 N N N -12.538 5.573  -19.424 -4.866 -3.099 -0.979 H5  ZB9 34 
ZB9 H6  H6  H  0 1 N N N -13.220 6.968  -20.328 -6.170 -1.896 -0.828 H6  ZB9 35 
ZB9 H7  H7  H  0 1 N N N -14.670 7.858  -16.776 -2.578 -1.154 -1.284 H7  ZB9 36 
ZB9 H8  H8  H  0 1 N N N -12.429 10.874 -16.907 -0.826 -2.897 -1.454 H8  ZB9 37 
ZB9 H9  H9  H  0 1 N N N -13.868 10.202 -16.067 -0.905 -4.356 -0.437 H9  ZB9 38 
ZB9 H10 H10 H  0 1 N N N -14.635 8.123  -9.247  4.259  2.648  0.063  H10 ZB9 39 
ZB9 H11 H11 H  0 1 N N N -16.614 4.554  -21.008 -3.091 2.942  -0.635 H11 ZB9 40 
ZB9 H12 H12 H  0 1 N N N -11.031 9.058  -16.005 -0.479 -3.027 1.577  H12 ZB9 41 
ZB9 H13 H13 H  0 1 N N N -11.861 9.927  -14.671 0.788  -2.675 0.374  H13 ZB9 42 
ZB9 H14 H14 H  0 1 N N N -13.215 6.123  -15.825 -2.180 0.278  0.661  H14 ZB9 43 
ZB9 H15 H15 H  0 1 N N N -11.793 6.846  -16.650 -2.413 -1.102 1.765  H15 ZB9 44 
ZB9 H16 H16 H  0 1 N N N -11.851 8.979  -12.663 2.063  -1.162 1.237  H16 ZB9 45 
ZB9 H17 H17 H  0 1 N N N -13.312 9.865  -13.218 1.874  -1.181 -0.533 H17 ZB9 46 
ZB9 H18 H18 H  0 1 N N N -11.589 6.907  -12.010 3.954  -1.617 0.151  H18 ZB9 47 
ZB9 H19 H19 H  0 1 N N N -11.946 4.946  -8.212  7.769  0.246  -0.266 H19 ZB9 48 
ZB9 H20 H20 H  0 1 N N N -12.227 8.868  -18.281 -2.855 -3.393 0.772  H20 ZB9 49 
ZB9 H21 H21 H  0 1 N N N -13.908 9.489  -18.402 -3.180 -3.549 -0.971 H21 ZB9 50 
ZB9 H22 H22 H  0 1 N N N -13.646 9.415  -11.090 2.145  1.503  0.306  H22 ZB9 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZB9 C1  N1  DOUB Y N 1  
ZB9 C1  N2  SING Y N 2  
ZB9 N1  C2  SING Y N 3  
ZB9 C7  N4  SING N N 4  
ZB9 N2  C4  DOUB Y N 5  
ZB9 C2  N4  SING N N 6  
ZB9 C2  C3  DOUB Y N 7  
ZB9 N4  C8  SING N N 8  
ZB9 C4  C3  SING Y N 9  
ZB9 C4  N3  SING Y N 10 
ZB9 C9  C8  SING N N 11 
ZB9 C9  C10 SING N N 12 
ZB9 C3  C5  SING Y N 13 
ZB9 C8  C12 SING N N 14 
ZB9 N3  C6  SING Y N 15 
ZB9 C10 C11 SING N N 16 
ZB9 C12 N5  SING N N 17 
ZB9 C5  C6  DOUB Y N 18 
ZB9 C11 N5  SING N N 19 
ZB9 N5  C13 SING N N 20 
ZB9 C13 O1  DOUB N N 21 
ZB9 C13 C14 SING N N 22 
ZB9 C14 N6  SING N N 23 
ZB9 N6  C15 SING N N 24 
ZB9 C16 C15 DOUB Y N 25 
ZB9 C16 C17 SING Y N 26 
ZB9 C15 C20 SING Y N 27 
ZB9 CL2 C17 SING N N 28 
ZB9 C17 C18 DOUB Y N 29 
ZB9 C20 C19 DOUB Y N 30 
ZB9 C18 C19 SING Y N 31 
ZB9 C19 CL1 SING N N 32 
ZB9 N3  H1  SING N N 33 
ZB9 C5  H2  SING N N 34 
ZB9 C6  H3  SING N N 35 
ZB9 C7  H4  SING N N 36 
ZB9 C7  H5  SING N N 37 
ZB9 C7  H6  SING N N 38 
ZB9 C8  H7  SING N N 39 
ZB9 C10 H8  SING N N 40 
ZB9 C10 H9  SING N N 41 
ZB9 C20 H10 SING N N 42 
ZB9 C1  H11 SING N N 43 
ZB9 C11 H12 SING N N 44 
ZB9 C11 H13 SING N N 45 
ZB9 C12 H14 SING N N 46 
ZB9 C12 H15 SING N N 47 
ZB9 C14 H16 SING N N 48 
ZB9 C14 H17 SING N N 49 
ZB9 C16 H18 SING N N 50 
ZB9 C18 H19 SING N N 51 
ZB9 C9  H20 SING N N 52 
ZB9 C9  H21 SING N N 53 
ZB9 N6  H22 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZB9 SMILES           ACDLabs              12.01 "O=C(CNc1cc(Cl)cc(Cl)c1)N1CCCC(C1)N(C)c1ncnc2[NH]ccc21"                                                                                                                         
ZB9 InChI            InChI                1.06  "InChI=1S/C20H22Cl2N6O/c1-27(20-17-4-5-23-19(17)25-12-26-20)16-3-2-6-28(11-16)18(29)10-24-15-8-13(21)7-14(22)9-15/h4-5,7-9,12,16,24H,2-3,6,10-11H2,1H3,(H,23,25,26)/t16-/m1/s1" 
ZB9 InChIKey         InChI                1.06  RXWBGONJVWQVFN-MRXNPFEDSA-N                                                                                                                                                     
ZB9 SMILES_CANONICAL CACTVS               3.385 "CN([C@@H]1CCCN(C1)C(=O)CNc2cc(Cl)cc(Cl)c2)c3ncnc4[nH]ccc34"                                                                                                                    
ZB9 SMILES           CACTVS               3.385 "CN([CH]1CCCN(C1)C(=O)CNc2cc(Cl)cc(Cl)c2)c3ncnc4[nH]ccc34"                                                                                                                      
ZB9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(c1c2cc[nH]c2ncn1)[C@@H]3CCCN(C3)C(=O)CNc4cc(cc(c4)Cl)Cl"                                                                                                                    
ZB9 SMILES           "OpenEye OEToolkits" 2.0.7 "CN(c1c2cc[nH]c2ncn1)C3CCCN(C3)C(=O)CNc4cc(cc(c4)Cl)Cl"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZB9 "SYSTEMATIC NAME" ACDLabs              12.01 "2-(3,5-dichloroanilino)-1-{(3R)-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}ethan-1-one"                
ZB9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[3,5-bis(chloranyl)phenyl]amino]-1-[(3~{R})-3-[methyl(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl]ethanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZB9 "Create component" 2023-03-08 RCSB 
ZB9 "Initial release"  2023-04-05 RCSB 
# 
