data_DOA
# 
_chem_comp.id                                    DOA 
_chem_comp.name                                  "12-AMINO-DODECANOIC ACID" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H25 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2000-03-31 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        215.332 
_chem_comp.one_letter_code                       X 
_chem_comp.three_letter_code                     DOA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1EOJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DOA N    N    N 0 1 N N N Y Y N 14.879 18.083 14.027 -0.476 -0.020 8.533  N    DOA 1  
DOA C1   CA   C 0 1 N N N Y N N 14.181 17.484 12.891 0.399  -0.009 7.354  CA   DOA 2  
DOA C2   C2   C 0 1 N N N Y N N 14.484 18.153 11.570 -0.454 -0.017 6.084  C2   DOA 3  
DOA C3   C3   C 0 1 N N N Y N N 13.269 18.136 10.635 0.458  -0.005 4.856  C3   DOA 4  
DOA C4   C4   C 0 1 N N N Y N N 13.154 16.875 9.761  -0.394 -0.013 3.587  C4   DOA 5  
DOA C5   C5   C 0 1 N N N Y N N 12.058 17.034 8.672  0.518  -0.001 2.359  C5   DOA 6  
DOA C6   C6   C 0 1 N N N Y N N 11.784 15.717 7.930  -0.335 -0.009 1.089  C6   DOA 7  
DOA C7   C7   C 0 1 N N N Y N N 10.601 15.790 6.935  0.577  0.002  -0.138 C7   DOA 8  
DOA C8   C8   C 0 1 N N N Y N N 10.971 16.469 5.606  -0.276 -0.005 -1.408 C8   DOA 9  
DOA C9   C9   C 0 1 N N N Y N N 9.947  16.200 4.477  0.636  0.006  -2.636 C9   DOA 10 
DOA C10  C10  C 0 1 N N N Y N N 10.316 16.983 3.200  -0.216 -0.001 -3.906 C10  DOA 11 
DOA CA2  CA2  C 0 1 N N N Y N N 9.654  16.444 1.916  0.695  0.010  -5.134 CA2  DOA 12 
DOA C    C    C 0 1 N N N Y N Y 8.313  17.092 1.583  -0.144 0.002  -6.385 C    DOA 13 
DOA O    O    O 0 1 N N N Y N Y 8.064  17.473 0.436  -1.350 -0.010 -6.302 O    DOA 14 
DOA OXT  OXT  O 0 1 N Y N Y N Y 7.455  17.213 2.589  0.445  0.010  -7.590 OXT  DOA 15 
DOA H    H    H 0 1 N N N Y Y N 14.674 17.631 14.918 -0.972 0.858  8.535  H    DOA 16 
DOA H2   H2   H 0 1 N Y N Y Y N 14.689 19.083 14.078 0.125  -0.014 9.342  H2   DOA 17 
DOA HA1  HA1  H 0 1 N N N Y N N 14.388 16.389 12.834 1.018  0.887  7.370  HA1  DOA 18 
DOA HA2  HA2  H 0 1 N N N Y N N 13.081 17.456 13.074 1.038  -0.892 7.368  HA2  DOA 19 
DOA H21  H21  H 0 1 N N N Y N N 14.869 19.188 11.717 -1.073 -0.913 6.068  H21  DOA 20 
DOA H22  H22  H 0 1 N N N Y N N 15.379 17.702 11.081 -1.092 0.866  6.071  H22  DOA 21 
DOA H31  H31  H 0 1 N N N Y N N 12.330 18.292 11.215 1.078  0.891  4.873  H31  DOA 22 
DOA H32  H32  H 0 1 N N N Y N N 13.255 19.051 9.998  1.097  -0.888 4.870  H32  DOA 23 
DOA H41  H41  H 0 1 N N N Y N N 14.136 16.598 9.312  -1.014 -0.909 3.570  H41  DOA 24 
DOA H42  H42  H 0 1 N N N Y N N 12.983 15.963 10.380 -1.033 0.870  3.573  H42  DOA 25 
DOA H51  H51  H 0 1 N N N Y N N 11.120 17.458 9.101  1.137  0.895  2.375  H51  DOA 26 
DOA H52  H52  H 0 1 N N N Y N N 12.312 17.853 7.959  1.156  -0.884 2.372  H52  DOA 27 
DOA H61  H61  H 0 1 N N N Y N N 12.706 15.357 7.416  -0.954 -0.906 1.073  H61  DOA 28 
DOA H62  H62  H 0 1 N N N Y N N 11.635 14.882 8.654  -0.974 0.873  1.075  H62  DOA 29 
DOA H71  H71  H 0 1 N N N Y N N 10.168 14.777 6.757  1.196  0.899  -0.122 H71  DOA 30 
DOA H72  H72  H 0 1 N N N Y N N 9.718  16.286 7.402  1.216  -0.880 -0.124 H72  DOA 31 
DOA H81  H81  H 0 1 N N N Y N N 11.124 17.564 5.749  -0.895 -0.902 -1.424 H81  DOA 32 
DOA H82  H82  H 0 1 N N N Y N N 11.999 16.179 5.285  -0.914 0.877  -1.422 H82  DOA 33 
DOA H91  H91  H 0 1 N N N Y N N 9.835  15.109 4.273  1.256  0.903  -2.620 H91  DOA 34 
DOA H92  H92  H 0 1 N N N Y N N 8.904  16.417 4.806  1.275  -0.876 -2.622 H92  DOA 35 
DOA H101 H101 H 0 0 N N N Y N N 10.092 18.067 3.328  -0.836 -0.898 -3.922 H101 DOA 36 
DOA H102 H102 H 0 0 N N N Y N N 11.423 17.031 3.077  -0.855 0.881  -3.920 H102 DOA 37 
DOA HA21 HA21 H 0 0 N N N Y N N 10.353 16.528 1.051  1.315  0.906  -5.118 HA21 DOA 38 
DOA HA22 HA22 H 0 0 N N N Y N N 9.549  15.335 1.967  1.334  -0.873 -5.120 HA22 DOA 39 
DOA HXT  HXT  H 0 1 N Y N Y N Y 6.620  17.616 2.381  -0.093 0.005  -8.393 HXT  DOA 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DOA N   C1   SING N N 1  
DOA N   H    SING N N 2  
DOA N   H2   SING N N 3  
DOA C1  C2   SING N N 4  
DOA C1  HA1  SING N N 5  
DOA C1  HA2  SING N N 6  
DOA C2  C3   SING N N 7  
DOA C2  H21  SING N N 8  
DOA C2  H22  SING N N 9  
DOA C3  C4   SING N N 10 
DOA C3  H31  SING N N 11 
DOA C3  H32  SING N N 12 
DOA C4  C5   SING N N 13 
DOA C4  H41  SING N N 14 
DOA C4  H42  SING N N 15 
DOA C5  C6   SING N N 16 
DOA C5  H51  SING N N 17 
DOA C5  H52  SING N N 18 
DOA C6  C7   SING N N 19 
DOA C6  H61  SING N N 20 
DOA C6  H62  SING N N 21 
DOA C7  C8   SING N N 22 
DOA C7  H71  SING N N 23 
DOA C7  H72  SING N N 24 
DOA C8  C9   SING N N 25 
DOA C8  H81  SING N N 26 
DOA C8  H82  SING N N 27 
DOA C9  C10  SING N N 28 
DOA C9  H91  SING N N 29 
DOA C9  H92  SING N N 30 
DOA C10 CA2  SING N N 31 
DOA C10 H101 SING N N 32 
DOA C10 H102 SING N N 33 
DOA CA2 C    SING N N 34 
DOA CA2 HA21 SING N N 35 
DOA CA2 HA22 SING N N 36 
DOA C   O    DOUB N N 37 
DOA C   OXT  SING N N 38 
DOA OXT HXT  SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DOA SMILES           ACDLabs              10.04 "O=C(O)CCCCCCCCCCCN"                                                           
DOA SMILES_CANONICAL CACTVS               3.341 "NCCCCCCCCCCCC(O)=O"                                                           
DOA SMILES           CACTVS               3.341 "NCCCCCCCCCCCC(O)=O"                                                           
DOA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CCCCCC(=O)O)CCCCCN"                                                         
DOA SMILES           "OpenEye OEToolkits" 1.5.0 "C(CCCCCC(=O)O)CCCCCN"                                                         
DOA InChI            InChI                1.03  "InChI=1S/C12H25NO2/c13-11-9-7-5-3-1-2-4-6-8-10-12(14)15/h1-11,13H2,(H,14,15)" 
DOA InChIKey         InChI                1.03  PBLZLIFKVPJDCO-UHFFFAOYSA-N                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DOA "SYSTEMATIC NAME" ACDLabs              10.04 "12-aminododecanoic acid" 
DOA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "12-aminododecanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DOA "Create component"  2000-03-31 RCSB 
DOA "Modify descriptor" 2011-06-04 RCSB 
DOA "Modify backbone"   2023-11-03 PDBE 
DOA "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            DOA 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
