data_54B
# 
_chem_comp.id                                    54B 
_chem_comp.name                                  "1-ethyl-3-[5-[2-[(1S,5R)-3-methyl-3,8-diazabicyclo[3.2.1]octan-8-yl]-5-(2-oxidanylidene-3H-1,3,4-oxadiazol-5-yl)pyridin-3-yl]-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]pyridin-2-yl]urea" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H26 F3 N9 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-07-23 
_chem_comp.pdbx_modified_date                    2018-08-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        601.603 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     54B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5CJD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
54B FBL F1  F 0 1 N N N 64.887 -5.983  0.232  -1.973 -4.505 -2.737 FBL 54B 1  
54B CBK C1  C 0 1 N N N 64.057 -5.001  0.658  -0.610 -4.632 -2.447 CBK 54B 2  
54B FBM F2  F 0 1 N N N 63.860 -4.101  -0.341 -0.424 -5.665 -1.522 FBM 54B 3  
54B FBN F3  F 0 1 N N N 64.631 -4.385  1.719  0.091  -4.926 -3.622 FBN 54B 4  
54B CBJ C2  C 0 1 Y N N 62.693 -5.605  1.070  -0.097 -3.339 -1.867 CBJ 54B 5  
54B NBO N1  N 0 1 Y N N 61.799 -4.957  1.851  -0.892 -2.331 -1.601 NBO 54B 6  
54B CBI C3  C 0 1 Y N N 62.317 -6.821  0.667  1.198  -3.151 -1.585 CBI 54B 7  
54B SBP S1  S 0 1 Y N N 60.823 -7.077  1.316  1.388  -1.527 -0.928 SBP 54B 8  
54B CBH C4  C 0 1 Y N N 60.673 -5.645  2.078  -0.345 -1.260 -1.100 CBH 54B 9  
54B CBF C5  C 0 1 Y N N 59.647 -5.230  2.846  -1.062 -0.022 -0.733 CBF 54B 10 
54B CBE C6  C 0 1 Y N N 59.953 -4.463  3.975  -2.419 0.134  -1.023 CBE 54B 11 
54B CAX C7  C 0 1 Y N N 58.964 -3.998  4.850  -3.054 1.314  -0.660 CAX 54B 12 
54B NAY N2  N 0 1 N N N 59.160 -3.243  5.940  -4.408 1.480  -0.945 NAY 54B 13 
54B CAZ C8  C 0 1 N N N 60.305 -2.598  6.263  -5.010 2.660  -0.697 CAZ 54B 14 
54B OBA O1  O 0 1 N N N 61.367 -2.667  5.641  -4.352 3.609  -0.315 OBA 54B 15 
54B NBB N3  N 0 1 N N N 60.217 -1.854  7.368  -6.340 2.788  -0.872 NBB 54B 16 
54B CBC C9  C 0 1 N N N 61.343 -1.100  7.909  -6.994 4.071  -0.602 CBC 54B 17 
54B CBD C10 C 0 1 N N N 60.922 -0.564  9.273  -8.493 3.948  -0.878 CBD 54B 18 
54B NAW N4  N 0 1 Y N N 57.683 -4.288  4.603  -2.393 2.285  -0.048 NAW 54B 19 
54B CAV C11 C 0 1 Y N N 57.339 -5.054  3.498  -1.112 2.183  0.246  CAV 54B 20 
54B CAU C12 C 0 1 Y N N 58.295 -5.540  2.621  -0.396 1.035  -0.075 CAU 54B 21 
54B CAT C13 C 0 1 Y N N 57.789 -6.265  1.545  1.041  0.924  0.264  CAT 54B 22 
54B CAS C14 C 0 1 Y N N 57.091 -7.451  1.773  1.987  1.697  -0.406 CAS 54B 23 
54B CAL C15 C 0 1 Y N N 56.578 -8.166  0.694  3.333  1.554  -0.049 CAL 54B 24 
54B CAM C16 C 0 1 N N N 55.896 -9.295  0.866  4.376  2.351  -0.729 CAM 54B 25 
54B OAN O2  O 0 1 N N N 55.466 -10.077 -0.137 5.700  2.296  -0.467 OAN 54B 26 
54B CAO C17 C 0 1 N N N 54.797 -11.075 0.461  6.339  3.157  -1.276 CAO 54B 27 
54B OAP O3  O 0 1 N N N 54.260 -12.012 -0.127 7.539  3.360  -1.306 OAP 54B 28 
54B NAQ N5  N 0 1 N N N 54.794 -10.905 1.779  5.408  3.754  -2.049 NAQ 54B 29 
54B NAR N6  N 0 1 N N N 55.479 -9.775  2.034  4.167  3.215  -1.681 NAR 54B 30 
54B CAK C18 C 0 1 Y N N 56.735 -7.672  -0.591 3.677  0.652  0.957  CAK 54B 31 
54B NAJ N7  N 0 1 Y N N 57.418 -6.477  -0.795 2.756  -0.064 1.570  NAJ 54B 32 
54B CAI C19 C 0 1 Y N N 57.931 -5.787  0.235  1.472  0.043  1.269  CAI 54B 33 
54B NAH N8  N 0 1 N N N 58.547 -4.646  -0.071 0.541  -0.728 1.949  NAH 54B 34 
54B CAC C20 C 0 1 N N S 59.373 -4.420  -1.255 1.214  -1.731 2.819  CAC 54B 35 
54B CAB C21 C 0 1 N N N 58.435 -3.498  -2.033 1.714  -0.903 4.027  CAB 54B 36 
54B CAA C22 C 0 1 N N N 57.579 -2.794  -0.952 0.759  0.307  4.094  CAA 54B 37 
54B CAG C23 C 0 1 N N R 58.182 -3.272  0.350  -0.227 0.096  2.921  CAG 54B 38 
54B CAF C24 C 0 1 N N N 59.399 -2.429  0.696  -1.383 -0.778 3.436  CAF 54B 39 
54B NAE N9  N 0 1 N N N 60.289 -2.309  -0.461 -0.825 -1.929 4.160  NAE 54B 40 
54B CBG C25 C 0 1 N N N 61.507 -1.579  -0.092 -1.893 -2.799 4.668  CBG 54B 41 
54B CAD C26 C 0 1 N N N 60.634 -3.655  -0.925 0.122  -2.686 3.329  CAD 54B 42 
54B H1  H1  H 0 1 N N N 62.878 -7.500  0.042  1.990  -3.871 -1.734 H1  54B 43 
54B H4  H4  H 0 1 N N N 60.986 -4.222  4.178  -2.966 -0.652 -1.521 H4  54B 44 
54B H5  H5  H 0 1 N N N 58.391 -3.148  6.572  -4.918 0.745  -1.321 H5  54B 45 
54B H6  H6  H 0 1 N N N 59.340 -1.812  7.846  -6.865 2.031  -1.176 H6  54B 46 
54B H7  H7  H 0 1 N N N 62.218 -1.758  8.018  -6.837 4.347  0.441  H7  54B 47 
54B H8  H8  H 0 1 N N N 61.593 -0.265  7.238  -6.568 4.839  -1.248 H8  54B 48 
54B H9  H9  H 0 1 N N N 61.750 0.012   9.713  -8.980 4.902  -0.677 H9  54B 49 
54B H10 H10 H 0 1 N N N 60.044 0.088   9.156  -8.650 3.672  -1.921 H10 54B 50 
54B H11 H11 H 0 1 N N N 60.669 -1.405  9.935  -8.919 3.180  -0.231 H11 54B 51 
54B H12 H12 H 0 1 N N N 56.298 -5.277  3.317  -0.613 3.000  0.746  H12 54B 52 
54B H13 H13 H 0 1 N N N 56.949 -7.813  2.781  1.690  2.387  -1.182 H13 54B 53 
54B H14 H14 H 0 1 N N N 54.364 -11.504 2.454  5.567  4.424  -2.732 H14 54B 54 
54B H15 H15 H 0 1 N N N 56.328 -8.213  -1.432 4.714  0.538  1.238  H15 54B 55 
54B H16 H16 H 0 1 N N N 59.586 -5.346  -1.809 2.024  -2.250 2.307  H16 54B 56 
54B H17 H17 H 0 1 N N N 59.010 -2.760  -2.612 1.648  -1.490 4.943  H17 54B 57 
54B H18 H18 H 0 1 N N N 57.796 -4.081  -2.713 2.738  -0.570 3.861  H18 54B 58 
54B H19 H19 H 0 1 N N N 57.656 -1.700  -1.042 0.223  0.316  5.044  H19 54B 59 
54B H20 H20 H 0 1 N N N 56.524 -3.095  -1.030 1.314  1.236  3.962  H20 54B 60 
54B H21 H21 H 0 1 N N N 57.443 -3.270  1.165  -0.568 1.038  2.490  H21 54B 61 
54B H22 H22 H 0 1 N N N 59.068 -1.426  1.003  -2.011 -0.194 4.108  H22 54B 62 
54B H23 H23 H 0 1 N N N 59.945 -2.905  1.524  -1.977 -1.131 2.593  H23 54B 63 
54B H25 H25 H 0 1 N N N 62.166 -1.496  -0.969 -2.489 -3.168 3.833  H25 54B 64 
54B H26 H26 H 0 1 N N N 61.238 -0.572  0.261  -1.453 -3.643 5.200  H26 54B 65 
54B H27 H27 H 0 1 N N N 62.030 -2.121  0.710  -2.531 -2.234 5.348  H27 54B 66 
54B H28 H28 H 0 1 N N N 61.186 -4.184  -0.134 -0.406 -3.123 2.482  H28 54B 67 
54B H29 H29 H 0 1 N N N 61.263 -3.581  -1.825 0.577  -3.477 3.925  H29 54B 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
54B FBL CBK SING N N 1  
54B CBK FBM SING N N 2  
54B CBK FBN SING N N 3  
54B CBK CBJ SING N N 4  
54B CBJ NBO SING Y N 5  
54B CBJ CBI DOUB Y N 6  
54B NBO CBH DOUB Y N 7  
54B CBI SBP SING Y N 8  
54B SBP CBH SING Y N 9  
54B CBH CBF SING N N 10 
54B CBF CBE DOUB Y N 11 
54B CBF CAU SING Y N 12 
54B CBE CAX SING Y N 13 
54B CAX NAY SING N N 14 
54B CAX NAW DOUB Y N 15 
54B NAY CAZ SING N N 16 
54B CAZ OBA DOUB N N 17 
54B CAZ NBB SING N N 18 
54B NBB CBC SING N N 19 
54B CBC CBD SING N N 20 
54B NAW CAV SING Y N 21 
54B CAV CAU DOUB Y N 22 
54B CAU CAT SING N N 23 
54B CAT CAS DOUB Y N 24 
54B CAT CAI SING Y N 25 
54B CAS CAL SING Y N 26 
54B CAL CAM SING N N 27 
54B CAL CAK DOUB Y N 28 
54B CAM OAN SING N N 29 
54B CAM NAR DOUB N N 30 
54B OAN CAO SING N N 31 
54B CAO OAP DOUB N N 32 
54B CAO NAQ SING N N 33 
54B NAQ NAR SING N N 34 
54B CAK NAJ SING Y N 35 
54B NAJ CAI DOUB Y N 36 
54B CAI NAH SING N N 37 
54B NAH CAC SING N N 38 
54B NAH CAG SING N N 39 
54B CAC CAB SING N N 40 
54B CAC CAD SING N N 41 
54B CAB CAA SING N N 42 
54B CAA CAG SING N N 43 
54B CAG CAF SING N N 44 
54B CAF NAE SING N N 45 
54B NAE CBG SING N N 46 
54B NAE CAD SING N N 47 
54B CBI H1  SING N N 48 
54B CBE H4  SING N N 49 
54B NAY H5  SING N N 50 
54B NBB H6  SING N N 51 
54B CBC H7  SING N N 52 
54B CBC H8  SING N N 53 
54B CBD H9  SING N N 54 
54B CBD H10 SING N N 55 
54B CBD H11 SING N N 56 
54B CAV H12 SING N N 57 
54B CAS H13 SING N N 58 
54B NAQ H14 SING N N 59 
54B CAK H15 SING N N 60 
54B CAC H16 SING N N 61 
54B CAB H17 SING N N 62 
54B CAB H18 SING N N 63 
54B CAA H19 SING N N 64 
54B CAA H20 SING N N 65 
54B CAG H21 SING N N 66 
54B CAF H22 SING N N 67 
54B CAF H23 SING N N 68 
54B CBG H25 SING N N 69 
54B CBG H26 SING N N 70 
54B CBG H27 SING N N 71 
54B CAD H28 SING N N 72 
54B CAD H29 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
54B InChI            InChI                1.03  
"InChI=1S/C26H26F3N9O3S/c1-3-30-24(39)34-20-7-17(23-33-19(12-42-23)26(27,28)29)18(9-31-20)16-6-13(22-35-36-25(40)41-22)8-32-21(16)38-14-4-5-15(38)11-37(2)10-14/h6-9,12,14-15H,3-5,10-11H2,1-2H3,(H,36,40)(H2,30,31,34,39)/t14-,15+" 
54B InChIKey         InChI                1.03  IDALGTCHRLCQSK-GASCZTMLSA-N 
54B SMILES_CANONICAL CACTVS               3.385 "CCNC(=O)Nc1cc(c2scc(n2)C(F)(F)F)c(cn1)c3cc(cnc3N4[C@H]5CC[C@@H]4CN(C)C5)C6=NNC(=O)O6" 
54B SMILES           CACTVS               3.385 "CCNC(=O)Nc1cc(c2scc(n2)C(F)(F)F)c(cn1)c3cc(cnc3N4[CH]5CC[CH]4CN(C)C5)C6=NNC(=O)O6" 
54B SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCNC(=O)Nc1cc(c(cn1)c2cc(cnc2N3[C@@H]4CC[C@H]3CN(C4)C)C5=NNC(=O)O5)c6nc(cs6)C(F)(F)F" 
54B SMILES           "OpenEye OEToolkits" 1.9.2 "CCNC(=O)Nc1cc(c(cn1)c2cc(cnc2N3C4CCC3CN(C4)C)C5=NNC(=O)O5)c6nc(cs6)C(F)(F)F" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
54B "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-ethyl-3-[5-[2-[(1S,5R)-3-methyl-3,8-diazabicyclo[3.2.1]octan-8-yl]-5-(2-oxidanylidene-3H-1,3,4-oxadiazol-5-yl)pyridin-3-yl]-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]pyridin-2-yl]urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
54B "Create component" 2015-07-23 RCSB 
54B "Initial release"  2018-09-05 RCSB 
# 
