data_P5B
#

_chem_comp.id                                   P5B
_chem_comp.name                                 "N-(ETHYLSULFONYL)TRYPTOPHYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}GLUTAMAMIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H33 N7 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-[2-ETHANESULFONYLAMINO-3-(1H-INDOL-3-YL)-PROPIONYLAMINO]-PENTANEDIOIC ACID 5-AMIDE 1-(4-CARBAMIM IDOYL-BENZYLAMIDE)"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-12-15
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       555.649
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P5B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1WUN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P5B  C14   C14   C  0  1  N  N  N  35.773   7.068  10.113  -1.235  -0.305   0.927  C14   P5B   1  
P5B  O1    O1    O  0  1  N  N  N  34.852   7.277  10.882  -0.919  -0.621   2.054  O1    P5B   2  
P5B  N5    N5    N  0  1  N  N  N  35.795   7.551   8.835  -0.287  -0.125  -0.013  N5    P5B   3  
P5B  C15   C15   C  0  1  N  N  S  34.675   8.358   8.386   1.126  -0.312   0.326  C15   P5B   4  
P5B  C18   C18   C  0  1  N  N  N  34.797   8.672   6.900   1.489  -1.793   0.200  C18   P5B   5  
P5B  C19   C19   C  0  1  N  N  N  36.062   9.451   6.514   0.712  -2.599   1.243  C19   P5B   6  
P5B  C20   C20   C  0  1  N  N  N  33.373   7.594   8.705   1.981   0.496  -0.615  C20   P5B   7  
P5B  O5    O5    O  0  1  N  N  N  33.308   6.373   8.578   1.461   1.163  -1.485  O5    P5B   8  
P5B  N6    N6    N  0  1  N  N  N  32.369   8.384   9.136   3.323   0.478  -0.492  N6    P5B   9  
P5B  C21   C21   C  0  1  N  N  N  31.126   7.734   9.431   4.153   1.264  -1.407  C21   P5B  10  
P5B  C16   C16   C  0  1  Y  N  N  31.755   6.625  11.595   6.327   0.050  -1.649  C16   P5B  11  
P5B  C17   C17   C  0  1  Y  N  N  31.520   6.372  12.946   7.658  -0.132  -1.333  C17   P5B  12  
P5B  C22   C22   C  0  1  Y  N  N  30.461   6.991  13.633   8.277   0.718  -0.416  C22   P5B  13  
P5B  C23   C23   C  0  1  Y  N  N  29.588   7.830  12.927   7.544   1.746   0.176  C23   P5B  14  
P5B  C24   C24   C  0  1  Y  N  N  29.795   8.071  11.558   6.216   1.921  -0.152  C24   P5B  15  
P5B  C25   C25   C  0  1  Y  N  N  30.883   7.474  10.890   5.606   1.072  -1.058  C25   P5B  16  
P5B  C26   C26   C  0  1  N  N  N  30.296   6.754  15.073   9.704   0.528  -0.072  C26   P5B  17  
P5B  N1    N1    N  0  1  N  N  N  30.944   5.752  15.658  10.386  -0.434  -0.627  N1    P5B  18  
P5B  C2    C2    C  0  1  N  N  N  35.909   9.844   5.066   1.069  -4.058   1.118  C2    P5B  19  
P5B  O2    O2    O  0  1  N  N  N  35.641   9.030   4.212   1.867  -4.418   0.279  O2    P5B  20  
P5B  N3    N3    N  0  1  N  N  N  35.996  11.139   4.828   0.502  -4.963   1.940  N3    P5B  21  
P5B  C1    C1    C  0  1  N  N  N  37.974   7.125  11.296  -3.212  -1.361  -0.134  C1    P5B  22  
P5B  N4    N4    N  0  1  N  N  N  36.552   5.174  11.479  -3.460   0.111   1.803  N4    P5B  23  
P5B  C5    C5    C  0  1  N  N  R  36.992   6.218  10.574  -2.689  -0.112   0.578  C5    P5B  24  
P5B  S1    S1    S  0  1  N  N  N  36.391   3.586  10.849  -3.785   1.654   2.308  S1    P5B  25  
P5B  O4    O4    O  0  1  N  N  N  35.754   3.792   9.596  -4.508   1.446   3.513  O4    P5B  26  
P5B  O3    O3    O  0  1  N  N  N  35.724   2.865  11.877  -2.503   2.267   2.292  O3    P5B  27  
P5B  C9    C9    C  0  1  N  N  N  37.975   2.960  10.598  -4.852   2.303   0.992  C9    P5B  28  
P5B  C8    C8    C  0  1  N  N  N  38.444   2.650  12.024  -5.245   3.745   1.318  C8    P5B  29  
P5B  N2    N2    N  0  1  N  N  N  29.483   7.490  15.825  10.312   1.369   0.834  N2    P5B  30  
P5B  C10   C10   C  0  1  Y  N  N  41.432   4.588  14.669  -6.441   0.626  -3.955  C10   P5B  31  
P5B  C7    C7    C  0  1  Y  N  N  41.885   4.729  13.312  -7.140   0.079  -2.901  C7    P5B  32  
P5B  C3    C3    C  0  1  Y  N  N  41.122   5.368  12.340  -6.449  -0.478  -1.829  C3    P5B  33  
P5B  C4    C4    C  0  1  Y  N  N  39.823   5.890  12.693  -5.042  -0.470  -1.836  C4    P5B  34  
P5B  C11   C11   C  0  1  Y  N  N  39.382   5.778  14.021  -4.355   0.084  -2.918  C11   P5B  35  
P5B  C6    C6    C  0  1  Y  N  N  40.164   5.127  15.038  -5.053   0.627  -3.960  C6    P5B  36  
P5B  N7    N7    N  0  1  Y  N  N  41.338   5.643  11.004  -6.846  -1.085  -0.659  N7    P5B  37  
P5B  C13   C13   C  0  1  Y  N  N  40.261   6.273  10.492  -5.748  -1.462   0.065  C13   P5B  38  
P5B  C12   C12   C  0  1  Y  N  N  39.288   6.451  11.489  -4.628  -1.122  -0.592  C12   P5B  39  
P5B  HN5   HN5   H  0  1  N  N  N  36.600   7.323   8.251  -0.539   0.128  -0.915  HN5   P5B  40  
P5B  H15   H15   H  0  1  N  N  N  34.666   9.338   8.918   1.301   0.019   1.350  H15   P5B  41  
P5B  H181  1H18  H  0  0  N  N  N  33.887   9.207   6.541   1.231  -2.147  -0.798  H181  P5B  42  
P5B  H182  2H18  H  0  0  N  N  N  34.719   7.737   6.298   2.559  -1.921   0.366  H182  P5B  43  
P5B  H191  1H19  H  0  0  N  N  N  37.003   8.889   6.719   0.969  -2.246   2.241  H191  P5B  44  
P5B  H192  2H19  H  0  0  N  N  N  36.266  10.318   7.185  -0.358  -2.472   1.077  H192  P5B  45  
P5B  HN6   HN6   H  0  1  N  N  N  32.535   9.386   9.231   3.738  -0.055   0.204  HN6   P5B  46  
P5B  H211  1H21  H  0  0  N  N  N  31.038   6.787   8.850   3.979   0.933  -2.431  H211  P5B  47  
P5B  H212  2H21  H  0  0  N  N  N  30.276   8.309   8.994   3.895   2.319  -1.317  H212  P5B  48  
P5B  H16   H16   H  0  1  N  N  N  32.619   6.160  11.091   5.847  -0.608  -2.359  H16   P5B  49  
P5B  H17   H17   H  0  1  N  N  N  32.183   5.671  13.480   8.220  -0.930  -1.795  H17   P5B  50  
P5B  H23   H23   H  0  1  N  N  N  28.738   8.301  13.449   8.018   2.408   0.887  H23   P5B  51  
P5B  H24   H24   H  0  1  N  N  N  29.103   8.730  11.007   5.648   2.718   0.306  H24   P5B  52  
P5B  HN1   HN1   H  0  1  N  N  N  30.527   4.937  15.209  11.321  -0.558  -0.402  HN1   P5B  53  
P5B  HN31  1HN3  H  0  0  N  N  N  35.893  11.405   3.849  -0.136  -4.676   2.612  HN31  P5B  54  
P5B  HN32  2HN3  H  0  0  N  N  N  36.222  11.825   5.548   0.732  -5.902   1.860  HN32  P5B  55  
P5B  H11A  1H1   H  0  0  N  N  N  37.557   7.494  12.262  -2.582  -1.578  -0.997  H11A  P5B  56  
P5B  H12   2H1   H  0  1  N  N  N  38.088   8.104  10.774  -3.190  -2.207   0.553  H12   P5B  57  
P5B  HN4   HN4   H  0  1  N  N  N  35.672   5.454  11.912  -3.780  -0.646   2.319  HN4   P5B  58  
P5B  H5    H5    H  0  1  N  N  N  37.479   5.750   9.687  -2.793   0.751  -0.079  H5    P5B  59  
P5B  H91   1H9   H  0  1  N  N  N  38.654   3.626  10.017  -5.751   1.690   0.917  H91   P5B  60  
P5B  H92   2H9   H  0  1  N  N  N  38.031   2.101   9.890  -4.316   2.278   0.043  H92   P5B  61  
P5B  H81   1H8   H  0  1  N  N  N  37.765   1.984  12.605  -5.886   4.135   0.527  H81   P5B  62  
P5B  H82   2H8   H  0  1  N  N  N  39.470   2.245  11.861  -5.781   3.770   2.267  H82   P5B  63  
P5B  H83   3H8   H  0  1  N  N  N  38.388   3.510  12.732  -4.346   4.358   1.393  H83   P5B  64  
P5B  HN21  1HN2  H  0  0  N  N  N  28.557   7.461  15.399   9.805   2.086   1.247  HN21  P5B  65  
P5B  HN22  2HN2  H  0  0  N  N  N  29.368   7.325  16.825  11.248   1.245   1.059  HN22  P5B  66  
P5B  H10   H10   H  0  1  N  N  N  42.052   4.071  15.421  -6.979   1.058  -4.786  H10   P5B  67  
P5B  H7    H7    H  0  1  N  N  N  42.865   4.328  13.002  -8.220   0.083  -2.906  H7    P5B  68  
P5B  H11   H11   H  0  1  N  N  N  38.399   6.211  14.271  -3.275   0.088  -2.929  H11   P5B  69  
P5B  H6    H6    H  0  1  N  N  N  39.800   5.043  16.076  -4.521   1.059  -4.794  H6    P5B  70  
P5B  HN7   HN7   H  0  1  N  N  N  42.176   5.413  10.470  -7.767  -1.225  -0.387  HN7   P5B  71  
P5B  H13   H13   H  0  1  N  N  N  40.188   6.589   9.438  -5.777  -1.959   1.023  H13   P5B  72  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P5B  C14  O1    DOUB  N  N   1  
P5B  C14  N5    SING  N  N   2  
P5B  C14  C5    SING  N  N   3  
P5B  N5   C15   SING  N  N   4  
P5B  N5   HN5   SING  N  N   5  
P5B  C15  C18   SING  N  N   6  
P5B  C15  C20   SING  N  N   7  
P5B  C15  H15   SING  N  N   8  
P5B  C18  C19   SING  N  N   9  
P5B  C18  H181  SING  N  N  10  
P5B  C18  H182  SING  N  N  11  
P5B  C19  C2    SING  N  N  12  
P5B  C19  H191  SING  N  N  13  
P5B  C19  H192  SING  N  N  14  
P5B  C20  O5    DOUB  N  N  15  
P5B  C20  N6    SING  N  N  16  
P5B  N6   C21   SING  N  N  17  
P5B  N6   HN6   SING  N  N  18  
P5B  C21  C25   SING  N  N  19  
P5B  C21  H211  SING  N  N  20  
P5B  C21  H212  SING  N  N  21  
P5B  C16  C17   SING  Y  N  22  
P5B  C16  C25   DOUB  Y  N  23  
P5B  C16  H16   SING  N  N  24  
P5B  C17  C22   DOUB  Y  N  25  
P5B  C17  H17   SING  N  N  26  
P5B  C22  C23   SING  Y  N  27  
P5B  C22  C26   SING  N  N  28  
P5B  C23  C24   DOUB  Y  N  29  
P5B  C23  H23   SING  N  N  30  
P5B  C24  C25   SING  Y  N  31  
P5B  C24  H24   SING  N  N  32  
P5B  C26  N1    DOUB  N  N  33  
P5B  C26  N2    SING  N  N  34  
P5B  N1   HN1   SING  N  N  35  
P5B  C2   O2    DOUB  N  N  36  
P5B  C2   N3    SING  N  N  37  
P5B  N3   HN31  SING  N  N  38  
P5B  N3   HN32  SING  N  N  39  
P5B  C1   C5    SING  N  N  40  
P5B  C1   C12   SING  N  N  41  
P5B  C1   H11A  SING  N  N  42  
P5B  C1   H12   SING  N  N  43  
P5B  N4   C5    SING  N  N  44  
P5B  N4   S1    SING  N  N  45  
P5B  N4   HN4   SING  N  N  46  
P5B  C5   H5    SING  N  N  47  
P5B  S1   O4    DOUB  N  N  48  
P5B  S1   O3    DOUB  N  N  49  
P5B  S1   C9    SING  N  N  50  
P5B  C9   C8    SING  N  N  51  
P5B  C9   H91   SING  N  N  52  
P5B  C9   H92   SING  N  N  53  
P5B  C8   H81   SING  N  N  54  
P5B  C8   H82   SING  N  N  55  
P5B  C8   H83   SING  N  N  56  
P5B  N2   HN21  SING  N  N  57  
P5B  N2   HN22  SING  N  N  58  
P5B  C10  C7    DOUB  Y  N  59  
P5B  C10  C6    SING  Y  N  60  
P5B  C10  H10   SING  N  N  61  
P5B  C7   C3    SING  Y  N  62  
P5B  C7   H7    SING  N  N  63  
P5B  C3   C4    DOUB  Y  N  64  
P5B  C3   N7    SING  Y  N  65  
P5B  C4   C11   SING  Y  N  66  
P5B  C4   C12   SING  Y  N  67  
P5B  C11  C6    DOUB  Y  N  68  
P5B  C11  H11   SING  N  N  69  
P5B  C6   H6    SING  N  N  70  
P5B  N7   C13   SING  Y  N  71  
P5B  N7   HN7   SING  N  N  72  
P5B  C13  C12   DOUB  Y  N  73  
P5B  C13  H13   SING  N  N  74  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P5B  SMILES            ACDLabs               10.04  "O=C(NCc1ccc(C(=[N@H])N)cc1)C(NC(=O)C(NS(=O)(=O)CC)Cc3c2ccccc2nc3)CCC(=O)N"  
P5B  SMILES_CANONICAL  CACTVS                3.341  "CC[S](=O)(=O)N[C@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCC(N)=O)C(=O)NCc3ccc(cc3)C(N)=N"  
P5B  SMILES            CACTVS                3.341  "CC[S](=O)(=O)N[CH](Cc1c[nH]c2ccccc12)C(=O)N[CH](CCC(N)=O)C(=O)NCc3ccc(cc3)C(N)=N"  
P5B  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCS(=O)(=O)N[C@H](Cc1c[nH]c2c1cccc2)C(=O)N[C@@H](CCC(=O)N)C(=O)NCc3ccc(cc3)C(=N)N"  
P5B  SMILES            "OpenEye OEToolkits"  1.5.0  "CCS(=O)(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NC(CCC(=O)N)C(=O)NCc3ccc(cc3)C(=N)N"  
P5B  InChI             InChI                 1.03   "InChI=1S/C26H33N7O5S/c1-2-39(37,38)33-22(13-18-15-30-20-6-4-3-5-19(18)20)26(36)32-21(11-12-23(27)34)25(35)31-14-16-7-9-17(10-8-16)24(28)29/h3-10,15,21-22,30,33H,2,11-14H2,1H3,(H2,27,34)(H3,28,29)(H,31,35)(H,32,36)/t21-,22+/m0/s1"  
P5B  InChIKey          InChI                 1.03   FJGWLOKDOKYXMU-FCHUYYIVSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P5B  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-(ethylsulfonyl)-D-tryptophyl-N~1~-(4-carbamimidoylbenzyl)-L-glutamamide"  
P5B  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[[(2R)-2-(ethylsulfonylamino)-3-(1H-indol-3-yl)propanoyl]amino]pentanediamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P5B  "Create component"   2004-12-15  RCSB  
P5B  "Modify descriptor"  2011-06-04  RCSB  
P5B  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     P5B
_pdbx_chem_comp_synonyms.name        "2-[2-ETHANESULFONYLAMINO-3-(1H-INDOL-3-YL)-PROPIONYLAMINO]-PENTANEDIOIC ACID 5-AMIDE 1-(4-CARBAMIM IDOYL-BENZYLAMIDE)"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
