data_6ZC
#

_chem_comp.id                                   6ZC
_chem_comp.name                                 "4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C14 H18 N2 O8"
_chem_comp.mon_nstd_parent_comp_id              PA1
_chem_comp.pdbx_synonyms                        
;N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide; 4-nitrophenyl
2-acetamido-2-deoxy-alpha-D-glucoside; 4-nitrophenyl 2-acetamido-2-deoxy-D-glucoside; 4-nitrophenyl
2-acetamido-2-deoxy-glucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-07-29
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       342.301
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6ZC
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5GGL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  6ZC  "N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide"  PDB  ?  
2  6ZC  "4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucoside"                                             PDB  ?  
3  6ZC  "4-nitrophenyl 2-acetamido-2-deoxy-D-glucoside"                                                   PDB  ?  
4  6ZC  "4-nitrophenyl 2-acetamido-2-deoxy-glucoside"                                                     PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6ZC  C1      C1     C   0  1  N  N  R  -0.037  16.127  76.374   1.018   0.286   0.567  C1      6ZC   1  
6ZC  C2      C2     C   0  1  N  N  R  -1.198  16.019  77.352   2.487   0.580   0.250  C2      6ZC   2  
6ZC  C3      C3     C   0  1  N  N  R  -0.903  16.819  78.627   2.999  -0.451  -0.761  C3      6ZC   3  
6ZC  C4      C4     C   0  1  N  N  S   0.459  16.397  79.218   2.798  -1.857  -0.187  C4      6ZC   4  
6ZC  C5      C5     C   0  1  N  N  R   1.560  16.538  78.171   1.318  -2.057   0.147  C5      6ZC   5  
6ZC  C6      C6     C   0  1  N  N  N   2.936  16.062  78.612   1.119  -3.437   0.776  C6      6ZC   6  
6ZC  N2      N2     N   0  1  N  N  N  -2.443  16.436  76.705   2.605   1.924  -0.319  N2      6ZC   7  
6ZC  O1      O1     O   0  1  N  N  N   0.064  17.436  75.843   0.237   0.420  -0.623  O1      6ZC   8  
6ZC  O4      O4     O   0  1  N  N  N   0.831  17.263  80.295   3.206  -2.829  -1.152  O4      6ZC   9  
6ZC  O5      O5     O   0  1  N  N  N   1.208  15.783  77.012   0.898  -1.048   1.067  O5      6ZC  10  
6ZC  O6      O6     O   0  1  N  N  N   2.887  14.656  78.886  -0.276  -3.670   0.981  O6      6ZC  11  
6ZC  O7      O7     O   0  1  N  N  N  -3.036  14.346  76.097   2.690   2.844   1.698  O7      6ZC  12  
6ZC  "O1'"   "O1'"  O   0  1  N  N  N   1.457  17.466  69.798  -6.054   0.438  -1.010  "O1'"   6ZC  13  
6ZC  "N1'"   "N1'"  N   1  1  N  N  N   2.291  17.698  70.877  -5.336   0.328  -0.032  "N1'"   6ZC  14  
6ZC  "O2'"   "O2'"  O  -1  1  N  N  N   3.656  17.901  70.761  -5.829   0.197   1.074  "O2'"   6ZC  15  
6ZC  "C4'"   "C4'"  C   0  1  Y  N  N   1.714  17.667  72.128  -3.864   0.352  -0.188  "C4'"   6ZC  16  
6ZC  "C3'"   "C3'"  C   0  1  Y  N  N   0.698  18.551  72.448  -3.306   0.500  -1.444  "C3'"   6ZC  17  
6ZC  "C2'"   "C2'"  C   0  1  Y  N  N   0.136  18.476  73.708  -1.932   0.523  -1.592  "C2'"   6ZC  18  
6ZC  "C5'"   "C5'"  C   0  1  Y  N  N   2.189  16.716  73.000  -3.051   0.232   0.923  "C5'"   6ZC  19  
6ZC  "C6'"   "C6'"  C   0  1  Y  N  N   1.629  16.646  74.250  -1.677   0.254   0.780  "C6'"   6ZC  20  
6ZC  "C1'"   "C1'"  C   0  1  Y  N  N   0.612  17.525  74.594  -1.114   0.398  -0.479  "C1'"   6ZC  21  
6ZC  C7      C7     C   0  1  N  N  N  -3.268  15.546  76.135   2.701   2.994   0.495  C7      6ZC  22  
6ZC  C8      C8     C   0  1  N  N  N  -4.528  16.094  75.525   2.823   4.378  -0.090  C8      6ZC  23  
6ZC  O3      O3     O   0  1  N  N  N  -1.943  16.568  79.574   4.389  -0.229  -1.008  O3      6ZC  24  
6ZC  H1      H1     H   0  1  N  N  N  -0.222  15.418  75.553   0.660   0.990   1.318  H1      6ZC  25  
6ZC  H2      H2     H   0  1  N  N  N  -1.294  14.962  77.640   3.076   0.517   1.164  H2      6ZC  26  
6ZC  H3      H3     H   0  1  N  N  N  -0.864  17.889  78.376   2.442  -0.355  -1.694  H3      6ZC  27  
6ZC  H4      H4     H   0  1  N  N  N   0.402  15.352  79.555   3.395  -1.969   0.718  H4      6ZC  28  
6ZC  H5      H5     H   0  1  N  N  N   1.638  17.602  77.901   0.726  -1.985  -0.766  H5      6ZC  29  
6ZC  H61     H6     H   0  1  N  N  N   3.665  16.255  77.811   1.521  -4.201   0.112  H61     6ZC  30  
6ZC  H62     H7     H   0  1  N  N  N   3.238  16.603  79.521   1.638  -3.478   1.734  H62     6ZC  31  
6ZC  HN21    H8     H   0  0  N  N  N  -2.684  17.406  76.688   2.614   2.045  -1.282  HN21    6ZC  32  
6ZC  HO4     H9     H   0  1  N  Y  N   0.176  17.215  80.981   3.106  -3.744  -0.855  HO4     6ZC  33  
6ZC  HO6     H10    H   0  1  N  Y  N   3.745  14.357  79.162  -0.477  -4.529   1.378  HO6     6ZC  34  
6ZC  H11     H11    H   0  1  N  N  N   0.353  19.281  71.731  -3.944   0.597  -2.310  H11     6ZC  35  
6ZC  H12     H12    H   0  1  N  N  N  -0.660  19.147  73.996  -1.497   0.639  -2.574  H12     6ZC  36  
6ZC  H13     H13    H   0  1  N  N  N   2.981  16.043  72.709  -3.490   0.121   1.904  H13     6ZC  37  
6ZC  H14     H14    H   0  1  N  N  N   1.977  15.912  74.962  -1.042   0.161   1.649  H14     6ZC  38  
6ZC  H15     H15    H   0  1  N  N  N  -5.115  15.270  75.093   3.876   4.621  -0.233  H15     6ZC  39  
6ZC  H16     H16    H   0  1  N  N  N  -5.121  16.599  76.301   2.308   4.413  -1.051  H16     6ZC  40  
6ZC  H17     H17    H   0  1  N  N  N  -4.270  16.814  74.734   2.372   5.101   0.590  H17     6ZC  41  
6ZC  HO3     H18    H   0  1  N  Y  N  -1.772  17.058  80.370   4.780  -0.847  -1.640  HO3     6ZC  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6ZC  "O1'"  "N1'"   DOUB  N  N   1  
6ZC  "O2'"  "N1'"   SING  N  N   2  
6ZC  "N1'"  "C4'"   SING  N  N   3  
6ZC  "C4'"  "C3'"   DOUB  Y  N   4  
6ZC  "C4'"  "C5'"   SING  Y  N   5  
6ZC  "C3'"  "C2'"   SING  Y  N   6  
6ZC  "C5'"  "C6'"   DOUB  Y  N   7  
6ZC  "C2'"  "C1'"   DOUB  Y  N   8  
6ZC  "C6'"  "C1'"   SING  Y  N   9  
6ZC  "C1'"  O1      SING  N  N  10  
6ZC  C8     C7      SING  N  N  11  
6ZC  O1     C1      SING  N  N  12  
6ZC  O7     C7      DOUB  N  N  13  
6ZC  C7     N2      SING  N  N  14  
6ZC  C1     O5      SING  N  N  15  
6ZC  C1     C2      SING  N  N  16  
6ZC  N2     C2      SING  N  N  17  
6ZC  O5     C5      SING  N  N  18  
6ZC  C2     C3      SING  N  N  19  
6ZC  C5     C6      SING  N  N  20  
6ZC  C5     C4      SING  N  N  21  
6ZC  C6     O6      SING  N  N  22  
6ZC  C3     C4      SING  N  N  23  
6ZC  C3     O3      SING  N  N  24  
6ZC  C4     O4      SING  N  N  25  
6ZC  C1     H1      SING  N  N  26  
6ZC  C2     H2      SING  N  N  27  
6ZC  C3     H3      SING  N  N  28  
6ZC  C4     H4      SING  N  N  29  
6ZC  C5     H5      SING  N  N  30  
6ZC  C6     H61     SING  N  N  31  
6ZC  C6     H62     SING  N  N  32  
6ZC  N2     HN21    SING  N  N  33  
6ZC  O4     HO4     SING  N  N  34  
6ZC  O6     HO6     SING  N  N  35  
6ZC  "C3'"  H11     SING  N  N  36  
6ZC  "C2'"  H12     SING  N  N  37  
6ZC  "C5'"  H13     SING  N  N  38  
6ZC  "C6'"  H14     SING  N  N  39  
6ZC  C8     H15     SING  N  N  40  
6ZC  C8     H16     SING  N  N  41  
6ZC  C8     H17     SING  N  N  42  
6ZC  O3     HO3     SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6ZC  InChI             InChI                 1.03   "InChI=1S/C14H18N2O8/c1-7(18)15-11-13(20)12(19)10(6-17)24-14(11)23-9-4-2-8(3-5-9)16(21)22/h2-5,10-14,17,19-20H,6H2,1H3,(H,15,18)/t10-,11-,12-,13-,14+/m1/s1"  
6ZC  InChIKey          InChI                 1.03   OMRLTNCLYHKQCK-KSTCHIGDSA-N  
6ZC  SMILES_CANONICAL  CACTVS                3.385  "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1Oc2ccc(cc2)[N+]([O-])=O"  
6ZC  SMILES            CACTVS                3.385  "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2ccc(cc2)[N+]([O-])=O"  
6ZC  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.5  "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@@H]1Oc2ccc(cc2)[N+](=O)[O-])CO)O)O"  
6ZC  SMILES            "OpenEye OEToolkits"  2.0.5  "CC(=O)NC1C(C(C(OC1Oc2ccc(cc2)[N+](=O)[O-])CO)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          6ZC
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.5
_pdbx_chem_comp_identifier.identifier       "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide"
#
_pdbx_chem_comp_related.comp_id            6ZC
_pdbx_chem_comp_related.related_comp_id    PA1
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  6ZC  C1    PA1  C1    "Carbohydrate core"  
 2  6ZC  C2    PA1  C2    "Carbohydrate core"  
 3  6ZC  C3    PA1  C3    "Carbohydrate core"  
 4  6ZC  C4    PA1  C4    "Carbohydrate core"  
 5  6ZC  C5    PA1  C5    "Carbohydrate core"  
 6  6ZC  C6    PA1  C6    "Carbohydrate core"  
 7  6ZC  N2    PA1  N2    "Carbohydrate core"  
 8  6ZC  O1    PA1  O1    "Carbohydrate core"  
 9  6ZC  O3    PA1  O3    "Carbohydrate core"  
10  6ZC  O4    PA1  O4    "Carbohydrate core"  
11  6ZC  O5    PA1  O5    "Carbohydrate core"  
12  6ZC  O6    PA1  O6    "Carbohydrate core"  
13  6ZC  H1    PA1  H1    "Carbohydrate core"  
14  6ZC  HO6   PA1  HO6   "Carbohydrate core"  
15  6ZC  HO3   PA1  HO3   "Carbohydrate core"  
16  6ZC  H2    PA1  H2    "Carbohydrate core"  
17  6ZC  H3    PA1  H3    "Carbohydrate core"  
18  6ZC  H4    PA1  H4    "Carbohydrate core"  
19  6ZC  H5    PA1  H5    "Carbohydrate core"  
20  6ZC  H61   PA1  H61   "Carbohydrate core"  
21  6ZC  H62   PA1  H62   "Carbohydrate core"  
22  6ZC  HN21  PA1  HN21  "Carbohydrate core"  
23  6ZC  HO4   PA1  HO4   "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
6ZC  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
6ZC  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
6ZC  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
6ZC  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6ZC  "Create component"          2016-07-29  PDBJ  
6ZC  "Initial release"           2016-08-10  RCSB  
6ZC  "Other modification"        2020-07-03  RCSB  
6ZC  "Modify parent residue"     2020-07-17  RCSB  
6ZC  "Modify name"               2020-07-17  RCSB  
6ZC  "Modify synonyms"           2020-07-17  RCSB  
6ZC  "Modify internal type"      2020-07-17  RCSB  
6ZC  "Modify linking type"       2020-07-17  RCSB  
6ZC  "Modify atom id"            2020-07-17  RCSB  
6ZC  "Modify component atom id"  2020-07-17  RCSB  
6ZC  "Modify leaving atom flag"  2020-07-17  RCSB  
##
