data_AVC
# 
_chem_comp.id                                    AVC 
_chem_comp.name                                  "ADENOSINE-5'-MONOPHOSPHATE-2',3'-VANADATE" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C10 H13 N5 O9 P V" 
_chem_comp.mon_nstd_parent_comp_id               A 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2002-07-25 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        429.154 
_chem_comp.one_letter_code                       A 
_chem_comp.three_letter_code                     AVC 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AVC OP3    O3P    O 0 1 N Y N ?      ?      ?      -4.521 2.999  1.024  OP3    AVC 1  
AVC P      P      P 0 1 N N N 31.327 86.953 19.092 -4.802 1.911  -0.129 P      AVC 2  
AVC OP1    O1P    O 0 1 N N N 30.277 86.870 20.139 -5.803 0.931  0.351  OP1    AVC 3  
AVC OP2    O2P    O 0 1 N N N 30.965 86.735 17.667 -5.364 2.653  -1.442 OP2    AVC 4  
AVC "O5'"  "O5'"  O 0 1 N N N 32.475 85.925 19.479 -3.432 1.145  -0.490 "O5'"  AVC 5  
AVC "C5'"  "C5'"  C 0 1 N N N 32.152 84.606 19.869 -2.742 0.306  0.438  "C5'"  AVC 6  
AVC "C4'"  "C4'"  C 0 1 N N R 33.012 84.192 21.027 -1.485 -0.261 -0.225 "C4'"  AVC 7  
AVC "O4'"  "O4'"  O 0 1 N N N 33.002 85.255 21.998 -0.534 0.792  -0.502 "O4'"  AVC 8  
AVC "C3'"  "C3'"  C 0 1 N N R 32.574 82.935 21.759 -0.717 -1.177 0.755  "C3'"  AVC 9  
AVC "O3'"  "O3'"  O 0 1 N N N 33.368 81.857 21.409 -1.346 -2.465 0.827  "O3'"  AVC 10 
AVC "C2'"  "C2'"  C 0 1 N N R 32.712 83.259 23.247 0.718  -1.135 0.203  "C2'"  AVC 11 
AVC "O2'"  "O2'"  O 0 1 N N N 33.626 82.422 23.859 0.993  -2.221 -0.732 "O2'"  AVC 12 
AVC "C1'"  "C1'"  C 0 1 N N R 33.206 84.709 23.277 0.759  0.175  -0.618 "C1'"  AVC 13 
AVC V      V      V 0 1 N N N 34.675 81.217 22.722 -0.029 -3.565 0.082  V      AVC 14 
AVC O1V    O1V    O 0 1 N N N 36.185 81.779 23.005 -0.635 -4.567 -0.984 O1V    AVC 15 
AVC O2V    O2V    O 0 1 N N N 34.436 79.847 23.581 0.927  -4.456 1.378  O2V    AVC 16 
AVC N9     N9     N 0 1 Y N N 32.430 85.481 24.245 1.787  1.069  -0.079 N9     AVC 17 
AVC C8     C8     C 0 1 Y N N 31.351 86.298 24.020 1.595  2.062  0.834  C8     AVC 18 
AVC N7     N7     N 0 1 Y N N 30.839 86.808 25.116 2.724  2.657  1.088  N7     AVC 19 
AVC C5     C5     C 0 1 Y N N 31.644 86.302 26.129 3.710  2.085  0.356  C5     AVC 20 
AVC C6     C6     C 0 1 Y N N 31.626 86.463 27.530 5.092  2.301  0.219  C6     AVC 21 
AVC N6     N6     N 0 1 N N N 30.733 87.215 28.180 5.727  3.297  0.940  N6     AVC 22 
AVC N1     N1     N 0 1 Y N N 32.569 85.818 28.249 5.774  1.526  -0.618 N1     AVC 23 
AVC C2     C2     C 0 1 Y N N 33.467 85.066 27.598 5.175  0.573  -1.310 C2     AVC 24 
AVC N3     N3     N 0 1 Y N N 33.587 84.837 26.291 3.885  0.336  -1.214 N3     AVC 25 
AVC C4     C4     C 0 1 Y N N 32.634 85.491 25.605 3.122  1.055  -0.398 C4     AVC 26 
AVC HOP3   HOP3   H 0 0 N N N 0.672  0.053  -0.670 -3.873 3.674  0.778  HOP3   AVC 27 
AVC HOP2   HOP2   H 0 0 N N N 30.020 86.688 17.583 -6.190 3.136  -1.298 HOP2   AVC 28 
AVC "H5'"  "H5'1" H 0 1 N N N 31.094 84.563 20.167 -2.459 0.890  1.314  "H5'"  AVC 29 
AVC "H5''" "H5'2" H 0 0 N N N 32.328 83.924 19.024 -3.393 -0.513 0.742  "H5''" AVC 30 
AVC "H4'"  "H4'"  H 0 1 N N N 33.999 83.980 20.590 -1.742 -0.798 -1.138 "H4'"  AVC 31 
AVC "H3'"  "H3'"  H 0 1 N N N 31.543 82.653 21.501 -0.722 -0.720 1.745  "H3'"  AVC 32 
AVC "H2'"  "H2'"  H 0 1 N N N 31.764 83.122 23.789 1.446  -1.127 1.014  "H2'"  AVC 33 
AVC "H1'"  "H1'"  H 0 1 N N N 34.268 84.740 23.561 0.970  -0.050 -1.663 "H1'"  AVC 34 
AVC HV     HV     H 0 1 N N N 34.390 79.105 22.989 1.618  -5.036 1.028  HV     AVC 35 
AVC H8     H8     H 0 1 N N N 30.960 86.502 23.034 0.645  2.318  1.281  H8     AVC 36 
AVC H61    H61    H 0 1 N N N 31.065 87.403 29.105 5.219  3.855  1.548  H61    AVC 37 
AVC H62    H62    H 0 1 N N N 30.604 88.077 27.690 6.682  3.436  0.837  H62    AVC 38 
AVC H2     H2     H 0 1 N N N 34.199 84.575 28.223 5.768  -0.033 -1.979 H2     AVC 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AVC OP3   P      SING N N 1  
AVC OP3   HOP3   SING N N 2  
AVC P     OP1    DOUB N N 3  
AVC P     OP2    SING N N 4  
AVC P     "O5'"  SING N N 5  
AVC OP2   HOP2   SING N N 6  
AVC "O5'" "C5'"  SING N N 7  
AVC "C5'" "C4'"  SING N N 8  
AVC "C5'" "H5'"  SING N N 9  
AVC "C5'" "H5''" SING N N 10 
AVC "C4'" "O4'"  SING N N 11 
AVC "C4'" "C3'"  SING N N 12 
AVC "C4'" "H4'"  SING N N 13 
AVC "O4'" "C1'"  SING N N 14 
AVC "C3'" "O3'"  SING N N 15 
AVC "C3'" "C2'"  SING N N 16 
AVC "C3'" "H3'"  SING N N 17 
AVC "O3'" V      SING N N 18 
AVC "C2'" "O2'"  SING N N 19 
AVC "C2'" "C1'"  SING N N 20 
AVC "C2'" "H2'"  SING N N 21 
AVC "O2'" V      SING N N 22 
AVC "C1'" N9     SING N N 23 
AVC "C1'" "H1'"  SING N N 24 
AVC V     O1V    DOUB N N 25 
AVC V     O2V    SING N N 26 
AVC O2V   HV     SING N N 27 
AVC N9    C8     SING Y N 28 
AVC N9    C4     SING Y N 29 
AVC C8    N7     DOUB Y N 30 
AVC C8    H8     SING N N 31 
AVC N7    C5     SING Y N 32 
AVC C5    C6     SING Y N 33 
AVC C5    C4     DOUB Y N 34 
AVC C6    N6     SING N N 35 
AVC C6    N1     DOUB Y N 36 
AVC N6    H61    SING N N 37 
AVC N6    H62    SING N N 38 
AVC N1    C2     SING Y N 39 
AVC C2    N3     DOUB Y N 40 
AVC C2    H2     SING N N 41 
AVC N3    C4     SING Y N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AVC SMILES           ACDLabs              10.04 "O=[V]1(OC2C(OC(C2O1)COP(=O)(O)O)n3c4ncnc(N)c4nc3)O"                                                                                                                                           
AVC SMILES_CANONICAL CACTVS               3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@H]4O[V](O)(=O)O[C@@H]34"                                                                                                                       
AVC SMILES           CACTVS               3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[V](O)(=O)O[CH]34"                                                                                                                             
AVC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(O)O)O[V@@](=O)(O4)O)N"                                                                                                                  
AVC SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C4C(C(O3)COP(=O)(O)O)O[V](=O)(O4)O)N"                                                                                                                                     
AVC InChI            InChI                1.03  "InChI=1S/C10H12N5O7P.H2O.O.V/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20;;;/h2-4,6-7,10H,1H2,(H2,11,12,13)(H2,18,19,20);1H2;;/q-2;;;+3/p-1/t4-,6-,7-,10-;;;/m1.../s1" 
AVC InChIKey         InChI                1.03  RQINHAKDRDTLML-MSQVLRTGSA-M                                                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AVC "SYSTEMATIC NAME" ACDLabs              10.04 "[5'-adenylato(2-)-kappa~2~O~2'~,O~3'~](hydroxy)oxovanadium"                                                                              
AVC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R,3S,5R,6R,8R)-6-(6-aminopurin-9-yl)-3-hydroxy-3-oxo-2,4,7-trioxa-3$l^{5}-vanadabicyclo[3.3.0]octan-8-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AVC "Create component"  2002-07-25 RCSB 
AVC "Modify descriptor" 2011-06-04 RCSB 
# 
