data_J0C
#

_chem_comp.id                                   J0C
_chem_comp.name                                 "2-azanyl-5-[[2-(3-but-3-ynyl-1,2-diazirin-3-yl)ethylamino]methyl]-1,7-dihydropyrrolo[2,3-d]pyrimidin-4-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H17 N7 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-09
_chem_comp.pdbx_modified_date                   2021-11-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       299.331
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    J0C
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7E9E
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J0C  C10  C1   C  0  1  N  N  N  -1.385  -16.186  -2.918  -0.751  -1.482  -0.755  C10  J0C   1  
J0C  C13  C2   C  0  1  N  N  N   1.788  -14.238  -3.396   2.546  -0.138   0.480  C13  J0C   2  
J0C  C17  C3   C  0  1  N  N  N   2.019  -14.522  -6.060   5.055   0.501   0.689  C17  J0C   3  
J0C  C20  C4   C  0  1  N  N  N   4.243  -16.893  -4.478   8.299   1.536   1.358  C20  J0C   4  
J0C  C21  C5   C  0  1  Y  N  N  -3.818  -16.029  -2.013  -2.723  -2.426   0.557  C21  J0C   5  
J0C  C2   C6   C  0  1  N  N  N  -3.038  -14.458  -5.353  -3.016   1.052  -0.666  C2   J0C   6  
J0C  C4   C7   C  0  1  N  N  N  -5.376  -13.645  -5.746  -5.136   1.412   0.195  C4   J0C   7  
J0C  C7   C8   C  0  1  Y  N  N  -4.830  -14.915  -3.639  -4.173  -0.724   0.575  C7   J0C   8  
J0C  C8   C9   C  0  1  Y  N  N  -3.502  -15.056  -4.021  -3.043  -0.307  -0.123  C8   J0C   9  
J0C  C9   C10  C  0  1  Y  N  N  -2.864  -15.755  -2.989  -2.117  -1.436  -0.121  C9   J0C  10  
J0C  C12  C11  C  0  1  N  N  N   0.910  -15.507  -3.237   1.566  -0.840  -0.462  C12  J0C  11  
J0C  C14  C12  C  0  1  N  N  N   1.747  -13.633  -4.821   3.948  -0.164  -0.131  C14  J0C  12  
J0C  C18  C13  C  0  1  N  N  N   3.517  -14.885  -6.184   6.384   0.386  -0.060  C18  J0C  13  
J0C  C19  C14  C  0  1  N  N  N   3.928  -16.017  -5.226   7.450   1.026   0.729  C19  J0C  14  
J0C  N3   N1   N  0  1  N  N  N  -4.000  -13.778  -6.158  -4.085   1.842  -0.469  N3   J0C  15  
J0C  N5   N2   N  0  1  N  N  N  -6.350  -12.950  -6.565  -6.198   2.261   0.363  N5   J0C  16  
J0C  N6   N3   N  0  1  N  N  N  -5.812  -14.208  -4.485  -5.214   0.162   0.720  N6   J0C  17  
J0C  N11  N4   N  0  1  N  N  N  -0.500  -15.169  -3.505   0.219  -0.814   0.124  N11  J0C  18  
J0C  N15  N5   N  0  1  N  N  N   0.855  -12.520  -5.006   4.304  -1.272  -1.021  N15  J0C  19  
J0C  N16  N6   N  0  1  N  N  N   2.275  -12.298  -4.922   4.077  -0.192  -1.590  N16  J0C  20  
J0C  N22  N7   N  0  1  Y  N  N  -4.997  -15.506  -2.414  -3.959  -2.003   0.973  N22  J0C  21  
J0C  O1   O1   O  0  1  N  N  N  -1.915  -14.544  -5.741  -2.045   1.458  -1.285  O1   J0C  22  
J0C  H1   H1   H  0  1  N  N  N  -1.261  -17.130  -3.469  -0.453  -2.520  -0.902  H1   J0C  23  
J0C  H2   H2   H  0  1  N  N  N  -1.107  -16.337  -1.865  -0.779  -0.971  -1.717  H2   J0C  24  
J0C  H3   H3   H  0  1  N  N  N   2.829  -14.503  -3.160   2.232   0.896   0.625  H3   J0C  25  
J0C  H4   H4   H  0  1  N  N  N   1.433  -13.478  -2.685   2.558  -0.652   1.441  H4   J0C  26  
J0C  H5   H5   H  0  1  N  N  N   1.708  -13.979  -6.964   4.813   1.553   0.840  H5   J0C  27  
J0C  H6   H6   H  0  1  N  N  N   1.434  -15.449  -5.969   5.139   0.005   1.656  H6   J0C  28  
J0C  H7   H7   H  0  1  N  N  N   4.523  -17.671  -3.814   9.059   1.993   1.921  H7   J0C  29  
J0C  H8   H8   H  0  1  N  N  N  -3.645  -16.567  -1.093  -2.304  -3.404   0.741  H8   J0C  30  
J0C  H9   H9   H  0  1  N  N  N   1.006  -15.892  -2.211   1.553  -0.325  -1.423  H9   J0C  31  
J0C  H10  H10  H  0  1  N  N  N   1.244  -16.275  -3.950   1.879  -1.874  -0.608  H10  J0C  32  
J0C  H11  H11  H  0  1  N  N  N   3.718  -15.206  -7.217   6.626  -0.666  -0.212  H11  J0C  33  
J0C  H12  H12  H  0  1  N  N  N   4.117  -13.992  -5.954   6.300   0.882  -1.027  H12  J0C  34  
J0C  H13  H13  H  0  1  N  N  N  -6.074  -12.549  -7.438  -6.984   1.964   0.848  H13  J0C  35  
J0C  H14  H14  H  0  1  N  N  N  -7.298  -12.872  -6.256  -6.163   3.158  -0.003  H14  J0C  36  
J0C  H15  H15  H  0  1  N  N  N  -6.764  -14.119  -4.192  -6.012  -0.109   1.200  H15  J0C  37  
J0C  H16  H16  H  0  1  N  N  N  -0.708  -14.278  -3.103   0.218  -1.228   1.045  H16  J0C  38  
J0C  H20  H20  H  0  1  N  N  N  -5.854  -15.544  -1.900  -4.588  -2.539   1.480  H20  J0C  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J0C  N5   C4   SING  N  N   1  
J0C  C18  C17  SING  N  N   2  
J0C  C18  C19  SING  N  N   3  
J0C  N3   C4   DOUB  N  N   4  
J0C  N3   C2   SING  N  N   5  
J0C  C17  C14  SING  N  N   6  
J0C  C4   N6   SING  N  N   7  
J0C  O1   C2   DOUB  N  N   8  
J0C  C2   C8   SING  N  N   9  
J0C  C19  C20  TRIP  N  N  10  
J0C  N15  N16  DOUB  N  N  11  
J0C  N15  C14  SING  N  N  12  
J0C  N16  C14  SING  N  N  13  
J0C  C14  C13  SING  N  N  14  
J0C  N6   C7   SING  N  N  15  
J0C  C8   C7   DOUB  Y  N  16  
J0C  C8   C9   SING  Y  N  17  
J0C  C7   N22  SING  Y  N  18  
J0C  N11  C12  SING  N  N  19  
J0C  N11  C10  SING  N  N  20  
J0C  C13  C12  SING  N  N  21  
J0C  C9   C10  SING  N  N  22  
J0C  C9   C21  DOUB  Y  N  23  
J0C  N22  C21  SING  Y  N  24  
J0C  C10  H1   SING  N  N  25  
J0C  C10  H2   SING  N  N  26  
J0C  C13  H3   SING  N  N  27  
J0C  C13  H4   SING  N  N  28  
J0C  C17  H5   SING  N  N  29  
J0C  C17  H6   SING  N  N  30  
J0C  C20  H7   SING  N  N  31  
J0C  C21  H8   SING  N  N  32  
J0C  C12  H9   SING  N  N  33  
J0C  C12  H10  SING  N  N  34  
J0C  C18  H11  SING  N  N  35  
J0C  C18  H12  SING  N  N  36  
J0C  N5   H13  SING  N  N  37  
J0C  N5   H14  SING  N  N  38  
J0C  N6   H15  SING  N  N  39  
J0C  N11  H16  SING  N  N  40  
J0C  N22  H20  SING  N  N  41  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J0C  InChI             InChI                 1.03   "InChI=1S/C14H17N7O/c1-2-3-4-14(20-21-14)5-6-16-7-9-8-17-11-10(9)12(22)19-13(15)18-11/h1,8,16H,3-7H2,(H4,15,17,18,19,22)"  
J0C  InChIKey          InChI                 1.03   XAJHFEIBEFHTRZ-UHFFFAOYSA-N  
J0C  SMILES_CANONICAL  CACTVS                3.385  "NC1=NC(=O)c2c(CNCCC3(CCC#C)N=N3)c[nH]c2N1"  
J0C  SMILES            CACTVS                3.385  "NC1=NC(=O)c2c(CNCCC3(CCC#C)N=N3)c[nH]c2N1"  
J0C  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C#CCCC1(N=N1)CCNCc2c[nH]c3c2C(=O)N=C(N3)N"  
J0C  SMILES            "OpenEye OEToolkits"  2.0.7  "C#CCCC1(N=N1)CCNCc2c[nH]c3c2C(=O)N=C(N3)N"  
#
_pdbx_chem_comp_identifier.comp_id          J0C
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-azanyl-5-[[2-(3-but-3-ynyl-1,2-diazirin-3-yl)ethylamino]methyl]-1,7-dihydropyrrolo[2,3-d]pyrimidin-4-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J0C  "Create component"  2021-03-09  PDBJ  
J0C  "Initial release"   2021-11-17  RCSB  
##
