data_8ZD
# 
_chem_comp.id                                    8ZD 
_chem_comp.name                                  "N-{2-[({1-[(2R)-pentan-2-yl]piperidin-4-yl}{[3-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]phenyl}propanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H37 F3 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.614 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8ZD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5V88 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8ZD FBI F1  F 0 1 N N N N N N 3.421  10.183 -3.605  -6.956 -1.180 -0.755 FBI 8ZD 1  
8ZD CBH C1  C 0 1 N N N N N N 2.262  10.722 -3.158  -5.778 -0.426 -0.722 CBH 8ZD 2  
8ZD FBJ F2  F 0 1 N N N N N N 2.128  12.007 -3.604  -5.495 0.054  -2.005 FBJ 8ZD 3  
8ZD FBK F3  F 0 1 N N N N N N 2.324  10.820 -1.880  -5.940 0.653  0.154  FBK 8ZD 4  
8ZD CBF C2  C 0 1 Y N N N N N 1.076  9.965  -3.664  -4.640 -1.292 -0.247 CBF 8ZD 5  
8ZD CBG C3  C 0 1 Y N N N N N 0.925  9.834  -5.004  -3.371 -0.759 -0.127 CBG 8ZD 6  
8ZD CBE C4  C 0 1 Y N N N N N 0.102  9.429  -2.781  -4.868 -2.617 0.074  CBE 8ZD 7  
8ZD CBD C5  C 0 1 Y N N N N N -0.981 8.776  -3.278  -3.826 -3.415 0.510  CBD 8ZD 8  
8ZD CBC C6  C 0 1 Y N N N N N -1.142 8.633  -4.674  -2.555 -2.890 0.627  CBC 8ZD 9  
8ZD CBB C7  C 0 1 Y N N N N N -0.204 9.117  -5.510  -2.323 -1.558 0.311  CBB 8ZD 10 
8ZD NBA N1  N 0 1 N N N N N N -0.432 8.990  -6.942  -1.036 -1.021 0.432  NBA 8ZD 11 
8ZD CAY C8  C 0 1 N N N N N N 0.607  8.714  -7.854  -0.045 -1.762 0.967  CAY 8ZD 12 
8ZD OAZ O1  O 0 1 N N N N N N 1.722  8.447  -7.497  -0.246 -2.924 1.261  OAZ 8ZD 13 
8ZD NAL N2  N 0 1 N N N N N N 0.238  8.726  -9.260  1.168  -1.214 1.176  NAL 8ZD 14 
8ZD CAI C9  C 0 1 N N N N N N 1.324  8.280  -10.292 1.383  0.211  0.913  CAI 8ZD 15 
8ZD CAJ C10 C 0 1 N N N N N N 1.510  9.101  -11.376 0.348  1.036  1.682  CAJ 8ZD 16 
8ZD CAK C11 C 0 1 N N N N N N 2.533  8.386  -12.271 0.539  2.519  1.355  CAK 8ZD 17 
8ZD CAH C12 C 0 1 N N N N N N 0.850  6.945  -10.673 1.231  0.483  -0.587 CAH 8ZD 18 
8ZD CAG C13 C 0 1 N N N N N N 1.574  6.296  -11.836 1.396  1.982  -0.848 CAG 8ZD 19 
8ZD NAF N3  N 0 1 N N N N N N 1.962  7.217  -12.834 0.381  2.727  -0.090 NAF 8ZD 20 
8ZD CAD C14 C 0 1 N N R N N N 2.800  6.739  -13.727 0.421  4.157  -0.423 CAD 8ZD 21 
8ZD CAE C15 C 0 1 N N N N N N 2.148  5.745  -14.754 1.759  4.748  0.025  CAE 8ZD 22 
8ZD CAC C16 C 0 1 N N N N N N 4.019  6.084  -12.994 -0.721 4.880  0.295  CAC 8ZD 23 
8ZD CAB C17 C 0 1 N N N N N N 5.129  5.541  -13.966 -2.060 4.297  -0.161 CAB 8ZD 24 
8ZD CAA C18 C 0 1 N N N N N N 5.480  4.136  -13.551 -3.204 5.100  0.460  CAA 8ZD 25 
8ZD CAM C19 C 0 1 N N N N N N -1.108 9.097  -9.603  2.272  -2.043 1.666  CAM 8ZD 26 
8ZD CAN C20 C 0 1 Y N N N N N -1.137 10.639 -10.064 3.089  -2.533 0.499  CAN 8ZD 27 
8ZD CAO C21 C 0 1 Y N N N N N -0.035 11.429 -9.983  2.843  -3.780 -0.042 CAO 8ZD 28 
8ZD CAP C22 C 0 1 Y N N N N N -0.089 12.792 -10.421 3.592  -4.231 -1.113 CAP 8ZD 29 
8ZD CAQ C23 C 0 1 Y N N N N N -1.219 13.312 -10.892 4.590  -3.435 -1.646 CAQ 8ZD 30 
8ZD CAR C24 C 0 1 Y N N N N N -2.373 12.510 -10.962 4.841  -2.188 -1.110 CAR 8ZD 31 
8ZD CAS C25 C 0 1 Y N N N N N -2.305 11.190 -10.567 4.086  -1.730 -0.038 CAS 8ZD 32 
8ZD NAT N4  N 0 1 N N N N N N -3.479 10.317 -10.591 4.337  -0.466 0.507  NAT 8ZD 33 
8ZD CAU C26 C 0 1 N N N N N N -3.653 9.368  -11.634 4.726  0.548  -0.292 CAU 8ZD 34 
8ZD OAV O2  O 0 1 N N N N N N -2.816 9.311  -12.548 4.766  0.391  -1.494 OAV 8ZD 35 
8ZD CAW C27 C 0 1 N N N N N N -4.773 8.464  -11.527 5.110  1.875  0.308  CAW 8ZD 36 
8ZD CAX C28 C 0 1 N N N N N N -4.374 7.187  -10.940 5.508  2.843  -0.808 CAX 8ZD 37 
8ZD H1  H1  H 0 1 N N N N N N 1.648  10.265 -5.681  -3.194 0.277  -0.374 H1  8ZD 38 
8ZD H2  H2  H 0 1 N N N N N N 0.222  9.540  -1.713  -5.862 -3.030 -0.016 H2  8ZD 39 
8ZD H3  H3  H 0 1 N N N N N N -1.719 8.366  -2.605  -4.008 -4.450 0.760  H3  8ZD 40 
8ZD H4  H4  H 0 1 N N N N N N -2.016 8.137  -5.070  -1.741 -3.514 0.969  H4  8ZD 41 
8ZD H5  H5  H 0 1 N N N N N N -1.362 9.103  -7.292  -0.858 -0.116 0.132  H5  8ZD 42 
8ZD H6  H6  H 0 1 N N N N N N 2.271  8.169  -9.743  2.386  0.494  1.234  H6  8ZD 43 
8ZD H7  H7  H 0 1 N N N N N N 1.899  10.078 -11.054 -0.655 0.725  1.390  H7  8ZD 44 
8ZD H8  H8  H 0 1 N N N N N N 0.562  9.244  -11.916 0.480  0.879  2.753  H8  8ZD 45 
8ZD H9  H9  H 0 1 N N N N N N 3.410  8.107  -11.669 -0.206 3.108  1.891  H9  8ZD 46 
8ZD H10 H10 H 0 1 N N N N N N 2.844  9.064  -13.080 1.537  2.832  1.660  H10 8ZD 47 
8ZD H11 H11 H 0 1 N N N N N N -0.214 7.028  -10.941 1.994  -0.068 -1.136 H11 8ZD 48 
8ZD H12 H12 H 0 1 N N N N N N 0.957  6.286  -9.799  0.242  0.163  -0.916 H12 8ZD 49 
8ZD H13 H13 H 0 1 N N N N N N 0.907  5.549  -12.290 2.390  2.298  -0.531 H13 8ZD 50 
8ZD H14 H14 H 0 1 N N N N N N 2.476  5.797  -11.452 1.274  2.181  -1.912 H14 8ZD 51 
8ZD H16 H16 H 0 1 N N N N N N 3.210  7.568  -14.323 0.310  4.283  -1.500 H16 8ZD 52 
8ZD H17 H17 H 0 1 N N N N N N 1.297  6.235  -15.250 1.789  5.810  -0.223 H17 8ZD 53 
8ZD H18 H18 H 0 1 N N N N N N 2.895  5.455  -15.508 1.870  4.623  1.102  H18 8ZD 54 
8ZD H19 H19 H 0 1 N N N N N N 1.796  4.848  -14.223 2.573  4.234  -0.487 H19 8ZD 55 
8ZD H20 H20 H 0 1 N N N N N N 3.648  5.244  -12.388 -0.615 4.748  1.372  H20 8ZD 56 
8ZD H21 H21 H 0 1 N N N N N N 4.474  6.839  -12.336 -0.687 5.943  0.054  H21 8ZD 57 
8ZD H22 H22 H 0 1 N N N N N N 6.022  6.180  -13.904 -2.128 4.348  -1.248 H22 8ZD 58 
8ZD H23 H23 H 0 1 N N N N N N 4.750  5.539  -14.999 -2.131 3.257  0.158  H23 8ZD 59 
8ZD H24 H24 H 0 1 N N N N N N 6.257  3.738  -14.221 -4.158 4.685  0.135  H24 8ZD 60 
8ZD H25 H25 H 0 1 N N N N N N 5.856  4.142  -12.517 -3.137 5.048  1.547  H25 8ZD 61 
8ZD H26 H26 H 0 1 N N N N N N 4.584  3.501  -13.612 -3.134 6.140  0.141  H26 8ZD 62 
8ZD H27 H27 H 0 1 N N N N N N -1.760 8.964  -8.727  2.904  -1.452 2.329  H27 8ZD 63 
8ZD H28 H28 H 0 1 N N N N N N -1.465 8.461  -10.426 1.870  -2.896 2.213  H28 8ZD 64 
8ZD H29 H29 H 0 1 N N N N N N 0.886  11.028 -9.587  2.065  -4.404 0.373  H29 8ZD 65 
8ZD H30 H30 H 0 1 N N N N N N 0.799  13.405 -10.368 3.398  -5.207 -1.533 H30 8ZD 66 
8ZD H31 H31 H 0 1 N N N N N N -1.251 14.341 -11.218 5.174  -3.790 -2.483 H31 8ZD 67 
8ZD H32 H32 H 0 1 N N N N N N -3.303 12.924 -11.322 5.620  -1.567 -1.527 H32 8ZD 68 
8ZD H33 H33 H 0 1 N N N N N N -4.165 10.389 -9.867  4.232  -0.319 1.460  H33 8ZD 69 
8ZD H34 H34 H 0 1 N N N N N N -5.545 8.924  -10.892 4.263  2.284  0.859  H34 8ZD 70 
8ZD H35 H35 H 0 1 N N N N N N -5.184 8.283  -12.531 5.952  1.737  0.987  H35 8ZD 71 
8ZD H36 H36 H 0 1 N N N N N N -5.249 6.524  -10.873 6.355  2.435  -1.359 H36 8ZD 72 
8ZD H37 H37 H 0 1 N N N N N N -3.606 6.717  -11.572 4.666  2.982  -1.486 H37 8ZD 73 
8ZD H38 H38 H 0 1 N N N N N N -3.966 7.358  -9.933  5.787  3.804  -0.374 H38 8ZD 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8ZD CAE CAD SING N N 1  
8ZD CAB CAA SING N N 2  
8ZD CAB CAC SING N N 3  
8ZD CAD CAC SING N N 4  
8ZD CAD NAF SING N N 5  
8ZD NAF CAK SING N N 6  
8ZD NAF CAG SING N N 7  
8ZD OAV CAU DOUB N N 8  
8ZD CAK CAJ SING N N 9  
8ZD CAG CAH SING N N 10 
8ZD CAU CAW SING N N 11 
8ZD CAU NAT SING N N 12 
8ZD CAW CAX SING N N 13 
8ZD CAJ CAI SING N N 14 
8ZD CAR CAQ DOUB Y N 15 
8ZD CAR CAS SING Y N 16 
8ZD CAQ CAP SING Y N 17 
8ZD CAH CAI SING N N 18 
8ZD NAT CAS SING N N 19 
8ZD CAS CAN DOUB Y N 20 
8ZD CAP CAO DOUB Y N 21 
8ZD CAI NAL SING N N 22 
8ZD CAN CAO SING Y N 23 
8ZD CAN CAM SING N N 24 
8ZD CAM NAL SING N N 25 
8ZD NAL CAY SING N N 26 
8ZD CAY OAZ DOUB N N 27 
8ZD CAY NBA SING N N 28 
8ZD NBA CBB SING N N 29 
8ZD CBB CBG DOUB Y N 30 
8ZD CBB CBC SING Y N 31 
8ZD CBG CBF SING Y N 32 
8ZD CBC CBD DOUB Y N 33 
8ZD CBF CBH SING N N 34 
8ZD CBF CBE DOUB Y N 35 
8ZD FBI CBH SING N N 36 
8ZD FBJ CBH SING N N 37 
8ZD CBD CBE SING Y N 38 
8ZD CBH FBK SING N N 39 
8ZD CBG H1  SING N N 40 
8ZD CBE H2  SING N N 41 
8ZD CBD H3  SING N N 42 
8ZD CBC H4  SING N N 43 
8ZD NBA H5  SING N N 44 
8ZD CAI H6  SING N N 45 
8ZD CAJ H7  SING N N 46 
8ZD CAJ H8  SING N N 47 
8ZD CAK H9  SING N N 48 
8ZD CAK H10 SING N N 49 
8ZD CAH H11 SING N N 50 
8ZD CAH H12 SING N N 51 
8ZD CAG H13 SING N N 52 
8ZD CAG H14 SING N N 53 
8ZD CAD H16 SING N N 54 
8ZD CAE H17 SING N N 55 
8ZD CAE H18 SING N N 56 
8ZD CAE H19 SING N N 57 
8ZD CAC H20 SING N N 58 
8ZD CAC H21 SING N N 59 
8ZD CAB H22 SING N N 60 
8ZD CAB H23 SING N N 61 
8ZD CAA H24 SING N N 62 
8ZD CAA H25 SING N N 63 
8ZD CAA H26 SING N N 64 
8ZD CAM H27 SING N N 65 
8ZD CAM H28 SING N N 66 
8ZD CAO H29 SING N N 67 
8ZD CAP H30 SING N N 68 
8ZD CAQ H31 SING N N 69 
8ZD CAR H32 SING N N 70 
8ZD NAT H33 SING N N 71 
8ZD CAW H34 SING N N 72 
8ZD CAW H35 SING N N 73 
8ZD CAX H36 SING N N 74 
8ZD CAX H37 SING N N 75 
8ZD CAX H38 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8ZD SMILES           ACDLabs              12.01 "FC(F)(F)c1cccc(c1)NC(=O)N(C2CCN(CC2)C(CCC)C)Cc3ccccc3NC(CC)=O"                                                                                                                                                   
8ZD InChI            InChI                1.03  "InChI=1S/C28H37F3N4O2/c1-4-9-20(3)34-16-14-24(15-17-34)35(19-21-10-6-7-13-25(21)33-26(36)5-2)27(37)32-23-12-8-11-22(18-23)28(29,30)31/h6-8,10-13,18,20,24H,4-5,9,14-17,19H2,1-3H3,(H,32,37)(H,33,36)/t20-/m1/s1" 
8ZD InChIKey         InChI                1.03  UHTIDTWXNLTVFU-HXUWFJFHSA-N                                                                                                                                                                                       
8ZD SMILES_CANONICAL CACTVS               3.385 "CCC[C@@H](C)N1CCC(CC1)N(Cc2ccccc2NC(=O)CC)C(=O)Nc3cccc(c3)C(F)(F)F"                                                                                                                                              
8ZD SMILES           CACTVS               3.385 "CCC[CH](C)N1CCC(CC1)N(Cc2ccccc2NC(=O)CC)C(=O)Nc3cccc(c3)C(F)(F)F"                                                                                                                                                
8ZD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCC[C@@H](C)N1CCC(CC1)N(Cc2ccccc2NC(=O)CC)C(=O)Nc3cccc(c3)C(F)(F)F"                                                                                                                                              
8ZD SMILES           "OpenEye OEToolkits" 2.0.6 "CCCC(C)N1CCC(CC1)N(Cc2ccccc2NC(=O)CC)C(=O)Nc3cccc(c3)C(F)(F)F"                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8ZD "SYSTEMATIC NAME" ACDLabs              12.01 "N-{2-[({1-[(2R)-pentan-2-yl]piperidin-4-yl}{[3-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]phenyl}propanamide"        
8ZD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[2-[[[1-[(2~{R})-pentan-2-yl]piperidin-4-yl]-[[3-(trifluoromethyl)phenyl]carbamoyl]amino]methyl]phenyl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8ZD "Create component" 2017-03-22 RCSB 
8ZD "Initial release"  2017-05-24 RCSB 
8ZD "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            8ZD 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CAX 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
