data_Q3D
#

_chem_comp.id                                   Q3D
_chem_comp.name                                 "8-(6-cyclopropylpyridin-3-yl)-N-[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]-1-(methylsulfonyl)imidazo[1,5-c]pyrimidin-5-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H22 F N5 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-11
_chem_comp.pdbx_modified_date                   2020-07-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       479.527
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q3D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6U92
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q3D  N1   N1   N  0  1  Y  N  N  -14.404  23.631  -23.658  -0.733   1.377   0.384  N1   Q3D   1  
Q3D  C2   C1   C  0  1  Y  N  N  -11.621  27.405  -21.240  -7.545  -0.116   0.572  C2   Q3D   2  
Q3D  C3   C2   C  0  1  Y  N  N  -11.271  26.382  -22.104  -6.952   0.240  -0.637  C3   Q3D   3  
Q3D  C5   C3   C  0  1  N  N  N  -11.277  24.263  -23.131  -5.268   0.992  -2.072  C5   Q3D   4  
Q3D  O2   O1   O  0  1  N  N  N  -19.480  24.841  -26.364   3.741  -1.222  -0.963  O2   Q3D   5  
Q3D  S    S1   S  0  1  N  N  N  -19.886  23.872  -25.389   3.184  -2.370  -0.338  S    Q3D   6  
Q3D  O1   O2   O  0  1  N  N  N  -21.052  24.155  -24.605   3.211  -3.638  -0.978  O1   Q3D   7  
Q3D  C23  C4   C  0  1  N  N  N  -20.122  22.336  -26.191   3.767  -2.509   1.374  C23  Q3D   8  
Q3D  C22  C5   C  0  1  Y  N  N  -18.515  23.610  -24.264   1.469  -1.994  -0.189  C22  Q3D   9  
Q3D  C20  C6   C  0  1  Y  N  N  -17.130  23.592  -24.350   0.934  -0.759   0.005  C20  Q3D  10  
Q3D  C11  C7   C  0  1  Y  N  N  -16.098  23.717  -25.359   1.476   0.594   0.154  C11  Q3D  11  
Q3D  C12  C8   C  0  1  Y  N  N  -16.452  23.830  -26.798   2.935   0.846   0.104  C12  Q3D  12  
Q3D  C19  C9   C  0  1  Y  N  N  -17.127  22.804  -27.444   3.749   0.517   1.188  C19  Q3D  13  
Q3D  N2   N2   N  0  1  Y  N  N  -17.344  22.770  -28.765   5.046   0.741   1.144  N2   Q3D  14  
Q3D  C15  C10  C  0  1  Y  N  N  -16.856  23.766  -29.518   5.624   1.278   0.087  C15  Q3D  15  
Q3D  C16  C11  C  0  1  N  N  N  -16.873  23.428  -30.994   7.112   1.516   0.097  C16  Q3D  16  
Q3D  C18  C12  C  0  1  N  N  N  -15.633  23.767  -31.787   7.604   2.904   0.513  C18  Q3D  17  
Q3D  C17  C13  C  0  1  N  N  N  -16.878  24.552  -32.003   7.682   2.472  -0.953  C17  Q3D  18  
Q3D  C14  C14  C  0  1  Y  N  N  -16.220  24.871  -28.959   4.886   1.632  -1.028  C14  Q3D  19  
Q3D  C13  C15  C  0  1  Y  N  N  -16.015  24.898  -27.586   3.520   1.412  -1.034  C13  Q3D  20  
Q3D  C10  C16  C  0  1  Y  N  N  -14.781  23.734  -24.969   0.578   1.627   0.343  C10  Q3D  21  
Q3D  N4   N3   N  0  1  Y  N  N  -18.887  23.504  -22.934   0.462  -2.872  -0.249  N4   Q3D  22  
Q3D  C21  C17  C  0  1  Y  N  N  -17.797  23.440  -22.225  -0.679  -2.250  -0.101  C21  Q3D  23  
Q3D  N3   N4   N  0  1  Y  N  N  -16.687  23.496  -23.017  -0.440  -0.923   0.062  N3   Q3D  24  
Q3D  C9   C18  C  0  1  Y  N  N  -15.318  23.529  -22.701  -1.235   0.173   0.253  C9   Q3D  25  
Q3D  N    N5   N  0  1  N  N  N  -14.914  23.501  -21.401  -2.598   0.009   0.308  N    Q3D  26  
Q3D  C8   C19  C  0  1  N  N  N  -13.513  23.511  -21.003  -3.468   1.169   0.512  C8   Q3D  27  
Q3D  C7   C20  C  0  1  Y  N  N  -12.906  24.894  -21.119  -4.907   0.720   0.535  C7   Q3D  28  
Q3D  C    C21  C  0  1  Y  N  N  -13.230  25.941  -20.275  -5.501   0.356   1.732  C    Q3D  29  
Q3D  F    F1   F  0  1  N  N  N  -14.198  25.730  -19.362  -4.793   0.402   2.882  F    Q3D  30  
Q3D  C4   C22  C  0  1  Y  N  N  -11.895  25.141  -22.073  -5.629   0.662  -0.637  C4   Q3D  31  
Q3D  C6   C23  C  0  1  N  N  N  -10.236  25.162  -23.752  -6.660   1.073  -2.742  C6   Q3D  32  
Q3D  O    O3   O  0  1  N  N  N  -10.286  26.439  -23.066  -7.469   0.238  -1.897  O    Q3D  33  
Q3D  C1   C24  C  0  1  Y  N  N  -12.624  27.175  -20.312  -6.823  -0.055   1.746  C1   Q3D  34  
Q3D  H1   H1   H  0  1  N  N  N  -11.123  28.362  -21.288  -8.576  -0.438   0.591  H1   Q3D  35  
Q3D  H3   H2   H  0  1  N  N  N  -12.026  23.953  -23.875  -4.749   1.948  -2.133  H3   Q3D  36  
Q3D  H2   H3   H  0  1  N  N  N  -10.813  23.371  -22.684  -4.668   0.197  -2.515  H2   Q3D  37  
Q3D  H20  H4   H  0  1  N  N  N  -20.434  21.581  -25.454   3.362  -1.686   1.964  H20  Q3D  38  
Q3D  H19  H5   H  0  1  N  N  N  -20.900  22.440  -26.961   3.433  -3.457   1.796  H19  Q3D  39  
Q3D  H21  H6   H  0  1  N  N  N  -19.180  22.020  -26.662   4.856  -2.467   1.392  H21  Q3D  40  
Q3D  H17  H7   H  0  1  N  N  N  -17.499  21.985  -26.846   3.312   0.076   2.072  H17  Q3D  41  
Q3D  H12  H8   H  0  1  N  N  N  -17.403  22.508  -31.280   7.723   0.659   0.382  H12  Q3D  42  
Q3D  H15  H9   H  0  1  N  N  N  -15.276  23.079  -32.568   6.850   3.645   0.780  H15  Q3D  43  
Q3D  H16  H10  H  0  1  N  N  N  -14.771  24.232  -31.286   8.538   2.961   1.072  H16  Q3D  44  
Q3D  H13  H11  H  0  1  N  N  N  -16.935  25.596  -31.661   8.668   2.244  -1.359  H13  Q3D  45  
Q3D  H14  H12  H  0  1  N  N  N  -17.439  24.443  -32.943   6.981   2.929  -1.651  H14  Q3D  46  
Q3D  H11  H13  H  0  1  N  N  N  -15.893  25.691  -29.581   5.372   2.072  -1.887  H11  Q3D  47  
Q3D  H10  H14  H  0  1  N  N  N  -15.519  25.742  -27.129   2.919   1.679  -1.891  H10  Q3D  48  
Q3D  H9   H15  H  0  1  N  N  N  -14.016  23.832  -25.725   0.937   2.639   0.457  H9   Q3D  49  
Q3D  H18  H16  H  0  1  N  N  N  -17.774  23.354  -21.149  -1.654  -2.716  -0.108  H18  Q3D  50  
Q3D  H8   H17  H  0  1  N  N  N  -15.329  24.301  -20.967  -2.984  -0.876   0.213  H8   Q3D  51  
Q3D  H6   H18  H  0  1  N  N  N  -13.437  23.175  -19.958  -3.222   1.646   1.461  H6   Q3D  52  
Q3D  H7   H19  H  0  1  N  N  N  -12.953  22.821  -21.652  -3.322   1.880  -0.301  H7   Q3D  53  
Q3D  H4   H20  H  0  1  N  N  N   -9.238  24.714  -23.636  -7.030   2.099  -2.740  H4   Q3D  54  
Q3D  H5   H21  H  0  1  N  N  N  -10.453  25.303  -24.821  -6.624   0.677  -3.757  H5   Q3D  55  
Q3D  H    H22  H  0  1  N  N  N  -12.926  27.954  -19.627  -7.291  -0.329   2.680  H    Q3D  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q3D  C17  C18  SING  N  N   1  
Q3D  C17  C16  SING  N  N   2  
Q3D  C18  C16  SING  N  N   3  
Q3D  C16  C15  SING  N  N   4  
Q3D  C15  C14  DOUB  Y  N   5  
Q3D  C15  N2   SING  Y  N   6  
Q3D  C14  C13  SING  Y  N   7  
Q3D  N2   C19  DOUB  Y  N   8  
Q3D  C13  C12  DOUB  Y  N   9  
Q3D  C19  C12  SING  Y  N  10  
Q3D  C12  C11  SING  N  N  11  
Q3D  O2   S    DOUB  N  N  12  
Q3D  C23  S    SING  N  N  13  
Q3D  S    O1   DOUB  N  N  14  
Q3D  S    C22  SING  N  N  15  
Q3D  C11  C10  DOUB  Y  N  16  
Q3D  C11  C20  SING  Y  N  17  
Q3D  C10  N1   SING  Y  N  18  
Q3D  C20  C22  DOUB  Y  N  19  
Q3D  C20  N3   SING  Y  N  20  
Q3D  C22  N4   SING  Y  N  21  
Q3D  C6   C5   SING  N  N  22  
Q3D  C6   O    SING  N  N  23  
Q3D  N1   C9   DOUB  Y  N  24  
Q3D  C5   C4   SING  N  N  25  
Q3D  O    C3   SING  N  N  26  
Q3D  N3   C9   SING  Y  N  27  
Q3D  N3   C21  SING  Y  N  28  
Q3D  N4   C21  DOUB  Y  N  29  
Q3D  C9   N    SING  N  N  30  
Q3D  C3   C4   DOUB  Y  N  31  
Q3D  C3   C2   SING  Y  N  32  
Q3D  C4   C7   SING  Y  N  33  
Q3D  N    C8   SING  N  N  34  
Q3D  C2   C1   DOUB  Y  N  35  
Q3D  C7   C8   SING  N  N  36  
Q3D  C7   C    DOUB  Y  N  37  
Q3D  C1   C    SING  Y  N  38  
Q3D  C    F    SING  N  N  39  
Q3D  C2   H1   SING  N  N  40  
Q3D  C5   H3   SING  N  N  41  
Q3D  C5   H2   SING  N  N  42  
Q3D  C23  H20  SING  N  N  43  
Q3D  C23  H19  SING  N  N  44  
Q3D  C23  H21  SING  N  N  45  
Q3D  C19  H17  SING  N  N  46  
Q3D  C16  H12  SING  N  N  47  
Q3D  C18  H15  SING  N  N  48  
Q3D  C18  H16  SING  N  N  49  
Q3D  C17  H13  SING  N  N  50  
Q3D  C17  H14  SING  N  N  51  
Q3D  C14  H11  SING  N  N  52  
Q3D  C13  H10  SING  N  N  53  
Q3D  C10  H9   SING  N  N  54  
Q3D  C21  H18  SING  N  N  55  
Q3D  N    H8   SING  N  N  56  
Q3D  C8   H6   SING  N  N  57  
Q3D  C8   H7   SING  N  N  58  
Q3D  C6   H4   SING  N  N  59  
Q3D  C6   H5   SING  N  N  60  
Q3D  C1   H    SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q3D  SMILES            ACDLabs               12.01  "n2c(n1c(c(S(=O)(=O)C)nc1)c(c2)c3cnc(cc3)C4CC4)NCc6c(F)ccc5c6CCO5"  
Q3D  InChI             InChI                 1.03   "InChI=1S/C24H22FN5O3S/c1-34(31,32)23-22-17(15-4-6-20(26-10-15)14-2-3-14)11-27-24(30(22)13-29-23)28-12-18-16-8-9-33-21(16)7-5-19(18)25/h4-7,10-11,13-14H,2-3,8-9,12H2,1H3,(H,27,28)"  
Q3D  InChIKey          InChI                 1.03   BMLWIABJRSYZDK-UHFFFAOYSA-N  
Q3D  SMILES_CANONICAL  CACTVS                3.385  "C[S](=O)(=O)c1ncn2c(NCc3c(F)ccc4OCCc34)ncc(c5ccc(nc5)C6CC6)c12"  
Q3D  SMILES            CACTVS                3.385  "C[S](=O)(=O)c1ncn2c(NCc3c(F)ccc4OCCc34)ncc(c5ccc(nc5)C6CC6)c12"  
Q3D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CS(=O)(=O)c1c2c(cnc(n2cn1)NCc3c(ccc4c3CCO4)F)c5ccc(nc5)C6CC6"  
Q3D  SMILES            "OpenEye OEToolkits"  2.0.7  "CS(=O)(=O)c1c2c(cnc(n2cn1)NCc3c(ccc4c3CCO4)F)c5ccc(nc5)C6CC6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q3D  "SYSTEMATIC NAME"  ACDLabs               12.01  "8-(6-cyclopropylpyridin-3-yl)-N-[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]-1-(methylsulfonyl)imidazo[1,5-c]pyrimidin-5-amine"  
Q3D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "8-(6-cyclopropylpyridin-3-yl)-~{N}-[(5-fluoranyl-2,3-dihydro-1-benzofuran-4-yl)methyl]-1-methylsulfonyl-imidazo[1,5-c]pyrimidin-5-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q3D  "Create component"  2019-09-11  RCSB  
Q3D  "Initial release"   2020-07-08  RCSB  
##
