data_S6D
#

_chem_comp.id                                   S6D
_chem_comp.name                                 "2-[(1~{S},5~{R})-3-[2-[(2~{S})-2-methylazetidin-1-yl]-6-(trifluoromethyl)pyrimidin-4-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H19 F3 N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-04
_chem_comp.pdbx_modified_date                   2020-09-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       356.343
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S6D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6W0Z
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S6D  N3   N1   N  0  1  Y  N  N  -4.176   0.194  18.065   0.591   0.838   0.623  N3   S6D   1  
S6D  C4   C1   C  0  1  N  N  N  -2.310  -1.264  15.243   2.673   2.994   1.192  C4   S6D   2  
S6D  N2   N2   N  0  1  Y  N  N  -2.932  -1.851  18.103   2.631   0.103  -0.183  N2   S6D   3  
S6D  C7   C2   C  0  1  Y  N  N  -4.523  -1.339  19.871   1.041  -1.464   0.503  C7   S6D   4  
S6D  C6   C3   C  0  1  Y  N  N  -3.572  -2.150  19.241   2.288  -1.165  -0.010  C6   S6D   5  
S6D  C9   C4   C  0  1  N  N  N  -6.498   0.676  20.908  -1.810   0.602   1.602  C9   S6D   6  
S6D  C13  C5   C  0  1  N  N  N  -6.154   3.229  21.252  -4.070   0.158   0.318  C13  S6D   7  
S6D  C8   C6   C  0  1  Y  N  N  -4.781  -0.127  19.214   0.182  -0.411   0.822  C8   S6D   8  
S6D  C16  C7   C  0  1  N  N  N  -3.187  -3.478  19.833   3.249  -2.269  -0.370  C16  S6D   9  
S6D  C1   C8   C  0  1  N  N  N  -2.756   2.043  15.665   3.676   2.834  -2.044  C1   S6D  10  
S6D  C2   C9   C  0  1  N  N  S  -3.278   0.647  15.369   3.577   2.460  -0.564  C2   S6D  11  
S6D  C3   C10  C  0  1  N  N  N  -2.595  -0.140  14.234   3.802   3.648   0.383  C3   S6D  12  
S6D  N1   N3   N  0  1  N  N  N  -2.676  -0.324  16.323   2.190   2.395  -0.066  N1   S6D  13  
S6D  C5   C11  C  0  1  Y  N  N  -3.284  -0.676  17.558   1.795   1.083   0.130  C5   S6D  14  
S6D  N4   N4   N  0  1  N  N  N  -5.667   0.810  19.711  -1.078  -0.664   1.339  N4   S6D  15  
S6D  C10  C12  C  0  1  N  N  S  -7.096   2.061  21.140  -3.298   0.191   1.639  C10  S6D  16  
S6D  C11  C13  C  0  1  N  N  R  -6.790   2.897  19.932  -3.374  -1.111   0.815  C11  S6D  17  
S6D  C12  C14  C  0  1  N  N  N  -5.875   2.083  19.022  -1.926  -1.377   0.350  C12  S6D  18  
S6D  C14  C15  C  0  1  N  N  N  -6.527   4.521  21.993  -5.597   0.200   0.393  C14  S6D  19  
S6D  C15  C16  C  0  1  N  N  N  -5.593   5.672  21.690  -6.167   0.287  -0.999  C15  S6D  20  
S6D  O1   O1   O  0  1  N  N  N  -4.929   5.744  20.667  -5.426   0.312  -1.954  O1   S6D  21  
S6D  O2   O2   O  0  1  N  N  N  -5.558   6.589  22.632  -7.496   0.336  -1.179  O2   S6D  22  
S6D  F1   F1   F  0  1  N  N  N  -3.382  -4.489  18.980   2.722  -3.019  -1.427  F1   S6D  23  
S6D  F2   F2   F  0  1  N  N  N  -1.911  -3.523  20.172   4.473  -1.714  -0.757  F2   S6D  24  
S6D  F3   F3   F  0  1  N  N  N  -3.863  -3.765  20.928   3.442  -3.099   0.740  F3   S6D  25  
S6D  H1   H1   H  0  1  N  N  N  -2.974  -2.136  15.153   3.026   2.259   1.916  H1   S6D  26  
S6D  H2   H2   H  0  1  N  N  N  -1.263  -1.601  15.267   1.977   3.712   1.627  H2   S6D  27  
S6D  H3   H3   H  0  1  N  N  N  -5.018  -1.623  20.788   0.737  -2.490   0.653  H3   S6D  28  
S6D  H4   H4   H  0  1  N  N  N  -7.294  -0.065  20.743  -1.508   1.024   2.561  H4   S6D  29  
S6D  H5   H5   H  0  1  N  N  N  -5.886   0.371  21.770  -1.633   1.319   0.800  H5   S6D  30  
S6D  H6   H6   H  0  1  N  N  N  -5.092   2.956  21.332  -3.627   0.671  -0.535  H6   S6D  31  
S6D  H7   H7   H  0  1  N  N  N  -3.332   2.483  16.492   3.225   3.814  -2.202  H7   S6D  32  
S6D  H8   H8   H  0  1  N  N  N  -1.695   1.985  15.948   4.724   2.864  -2.342  H8   S6D  33  
S6D  H9   H9   H  0  1  N  N  N  -2.863   2.672  14.769   3.149   2.091  -2.642  H9   S6D  34  
S6D  H10  H10  H  0  1  N  N  N  -4.376   0.597  15.322   4.171   1.583  -0.310  H10  S6D  35  
S6D  H11  H11  H  0  1  N  N  N  -1.696   0.342  13.823   3.541   4.616  -0.045  H11  S6D  36  
S6D  H12  H12  H  0  1  N  N  N  -3.266  -0.427  13.411   4.770   3.642   0.883  H12  S6D  37  
S6D  H13  H13  H  0  1  N  N  N  -8.092   2.133  21.602  -3.839   0.336   2.574  H13  S6D  38  
S6D  H14  H14  H  0  1  N  N  N  -7.556   3.556  19.497  -3.975  -1.961   1.139  H14  S6D  39  
S6D  H15  H15  H  0  1  N  N  N  -4.916   2.603  18.877  -1.768  -0.972  -0.649  H15  S6D  40  
S6D  H16  H16  H  0  1  N  N  N  -6.353   1.917  18.045  -1.712  -2.446   0.366  H16  S6D  41  
S6D  H17  H17  H  0  1  N  N  N  -7.546   4.811  21.699  -5.963  -0.704   0.879  H17  S6D  42  
S6D  H18  H18  H  0  1  N  N  N  -6.500   4.324  23.075  -5.909   1.073   0.968  H18  S6D  43  
S6D  H19  H19  H  0  1  N  N  N  -4.954   7.278  22.381  -7.814   0.391  -2.091  H19  S6D  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S6D  C3   C4   SING  N  N   1  
S6D  C3   C2   SING  N  N   2  
S6D  C4   N1   SING  N  N   3  
S6D  C2   C1   SING  N  N   4  
S6D  C2   N1   SING  N  N   5  
S6D  N1   C5   SING  N  N   6  
S6D  C5   N3   DOUB  Y  N   7  
S6D  C5   N2   SING  Y  N   8  
S6D  N3   C8   SING  Y  N   9  
S6D  N2   C6   DOUB  Y  N  10  
S6D  F1   C16  SING  N  N  11  
S6D  C12  N4   SING  N  N  12  
S6D  C12  C11  SING  N  N  13  
S6D  C8   N4   SING  N  N  14  
S6D  C8   C7   DOUB  Y  N  15  
S6D  C6   C16  SING  N  N  16  
S6D  C6   C7   SING  Y  N  17  
S6D  N4   C9   SING  N  N  18  
S6D  C16  F2   SING  N  N  19  
S6D  C16  F3   SING  N  N  20  
S6D  C11  C10  SING  N  N  21  
S6D  C11  C13  SING  N  N  22  
S6D  O1   C15  DOUB  N  N  23  
S6D  C9   C10  SING  N  N  24  
S6D  C10  C13  SING  N  N  25  
S6D  C13  C14  SING  N  N  26  
S6D  C15  C14  SING  N  N  27  
S6D  C15  O2   SING  N  N  28  
S6D  C4   H1   SING  N  N  29  
S6D  C4   H2   SING  N  N  30  
S6D  C7   H3   SING  N  N  31  
S6D  C9   H4   SING  N  N  32  
S6D  C9   H5   SING  N  N  33  
S6D  C13  H6   SING  N  N  34  
S6D  C1   H7   SING  N  N  35  
S6D  C1   H8   SING  N  N  36  
S6D  C1   H9   SING  N  N  37  
S6D  C2   H10  SING  N  N  38  
S6D  C3   H11  SING  N  N  39  
S6D  C3   H12  SING  N  N  40  
S6D  C10  H13  SING  N  N  41  
S6D  C11  H14  SING  N  N  42  
S6D  C12  H15  SING  N  N  43  
S6D  C12  H16  SING  N  N  44  
S6D  C14  H17  SING  N  N  45  
S6D  C14  H18  SING  N  N  46  
S6D  O2   H19  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S6D  InChI             InChI                 1.03   "InChI=1S/C16H19F3N4O2/c1-8-2-3-23(8)15-20-12(16(17,18)19)5-13(21-15)22-6-10-9(4-14(24)25)11(10)7-22/h5,8-11H,2-4,6-7H2,1H3,(H,24,25)/t8-,9-,10-,11+/m0/s1"  
S6D  InChIKey          InChI                 1.03   MDUYWDNWFXSMJJ-XWLWVQCSSA-N  
S6D  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1CCN1c2nc(cc(n2)C(F)(F)F)N3C[C@@H]4[C@H](C3)C4CC(O)=O"  
S6D  SMILES            CACTVS                3.385  "C[CH]1CCN1c2nc(cc(n2)C(F)(F)F)N3C[CH]4[CH](C3)C4CC(O)=O"  
S6D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1CCN1c2nc(cc(n2)N3C[C@@H]4[C@H](C3)C4CC(=O)O)C(F)(F)F"  
S6D  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CCN1c2nc(cc(n2)N3CC4C(C3)C4CC(=O)O)C(F)(F)F"  
#
_pdbx_chem_comp_identifier.comp_id          S6D
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-[(1~{S},5~{R})-3-[2-[(2~{S})-2-methylazetidin-1-yl]-6-(trifluoromethyl)pyrimidin-4-yl]-3-azabicyclo[3.1.0]hexan-6-yl]ethanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S6D  "Create component"  2020-03-04  RCSB  
S6D  "Initial release"   2020-09-23  RCSB  
##
