data_SDD
#

_chem_comp.id                                   SDD
_chem_comp.name                                 D-sorbose
_chem_comp.type                                 D-SACCHARIDE
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-02-11
_chem_comp.pdbx_modified_date                   2020-06-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       180.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SDD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3VNM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SDD  C1   C1   C  0  1  N  N  N  -6.730  -24.360  -13.407  -2.773   0.932  -0.700  C1   SDD   1  
SDD  O1   O1   O  0  1  N  N  N  -7.249  -23.115  -13.878  -4.036   1.006  -0.036  O1   SDD   2  
SDD  C2   C2   C  0  1  N  N  N  -7.796  -25.186  -12.681  -1.965  -0.200  -0.120  C2   SDD   3  
SDD  O2   O2   O  0  1  N  N  N  -8.559  -24.695  -11.850  -2.424  -0.875   0.770  O2   SDD   4  
SDD  C3   C3   C  0  1  N  N  R  -7.480  -26.679  -12.602  -0.585  -0.491  -0.652  C3   SDD   5  
SDD  O3   O3   O  0  1  N  N  N  -8.241  -27.214  -11.514  -0.215  -1.828  -0.310  O3   SDD   6  
SDD  C4   C4   C  0  1  N  N  S  -5.988  -26.824  -12.297   0.416   0.488  -0.034  C4   SDD   7  
SDD  O4   O4   O  0  1  N  N  N  -5.650  -25.945  -11.217   0.328   0.424   1.390  O4   SDD   8  
SDD  C5   C5   C  0  1  N  N  R  -5.661  -28.283  -11.961   1.832   0.116  -0.476  C5   SDD   9  
SDD  O5   O5   O  0  1  N  N  N  -4.341  -28.372  -11.420   2.092  -1.249  -0.143  O5   SDD  10  
SDD  C6   C6   C  0  1  N  N  N  -5.730  -29.130  -13.233   2.842   1.016   0.238  C6   SDD  11  
SDD  O6   O6   O  0  1  N  N  N  -7.053  -29.108  -13.773   4.155   0.748  -0.260  O6   SDD  12  
SDD  H11  H1   H  0  1  N  N  N  -6.357  -24.937  -14.266  -2.932   0.758  -1.764  H1   SDD  13  
SDD  H12  H2   H  0  1  N  N  N  -5.901  -24.160  -12.712  -2.235   1.870  -0.562  H2   SDD  14  
SDD  HO1  H3   H  0  1  N  N  N  -8.060  -22.917  -13.424  -4.609   1.714  -0.359  H3   SDD  15  
SDD  H3   H4   H  0  1  N  N  N  -7.725  -27.173  -13.554  -0.582  -0.378  -1.736  H4   SDD  16  
SDD  HO3  H5   H  0  1  N  N  N  -8.740  -26.518  -11.103  -0.197  -2.000   0.641  H5   SDD  17  
SDD  H4   H6   H  0  1  N  N  N  -5.421  -26.541  -13.196   0.186   1.501  -0.367  H6   SDD  18  
SDD  HO4  H7   H  0  1  N  N  N  -4.724  -26.027  -11.019   0.521  -0.450   1.757  H7   SDD  19  
SDD  H5   H8   H  0  1  N  N  N  -6.400  -28.659  -11.238   1.924   0.251  -1.554  H8   SDD  20  
SDD  HO5  H9   H  0  1  N  N  N  -4.287  -27.849  -10.629   2.027  -1.443   0.802  H9   SDD  21  
SDD  H61  H10  H  0  1  N  N  N  -5.453  -30.167  -12.994   2.591   2.061   0.056  H10  SDD  22  
SDD  H62  H11  H  0  1  N  N  N  -5.028  -28.725  -13.977   2.813   0.817   1.309  H11  SDD  23  
SDD  HO6  H12  H  0  1  N  N  N  -7.082  -29.637  -14.562   4.848   1.284   0.149  H12  SDD  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SDD  O1  C1   SING  N  N   1  
SDD  O6  C6   SING  N  N   2  
SDD  C1  C2   SING  N  N   3  
SDD  C6  C5   SING  N  N   4  
SDD  C2  C3   SING  N  N   5  
SDD  C2  O2   DOUB  N  N   6  
SDD  C3  C4   SING  N  N   7  
SDD  C3  O3   SING  N  N   8  
SDD  C4  C5   SING  N  N   9  
SDD  C4  O4   SING  N  N  10  
SDD  C5  O5   SING  N  N  11  
SDD  C1  H11  SING  N  N  12  
SDD  C1  H12  SING  N  N  13  
SDD  O1  HO1  SING  N  N  14  
SDD  C3  H3   SING  N  N  15  
SDD  O3  HO3  SING  N  N  16  
SDD  C4  H4   SING  N  N  17  
SDD  O4  HO4  SING  N  N  18  
SDD  C5  H5   SING  N  N  19  
SDD  O5  HO5  SING  N  N  20  
SDD  C6  H61  SING  N  N  21  
SDD  C6  H62  SING  N  N  22  
SDD  O6  HO6  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SDD  SMILES            ACDLabs               12.01  "O=C(C(O)C(O)C(O)CO)CO"  
SDD  InChI             InChI                 1.03   "InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3,5-9,11-12H,1-2H2/t3-,5+,6+/m1/s1"  
SDD  InChIKey          InChI                 1.03   BJHIKXHVCXFQLS-PYWDMBMJSA-N  
SDD  SMILES_CANONICAL  CACTVS                3.370  "OC[C@@H](O)[C@H](O)[C@@H](O)C(=O)CO"  
SDD  SMILES            CACTVS                3.370  "OC[CH](O)[CH](O)[CH](O)C(=O)CO"  
SDD  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C([C@H]([C@@H]([C@H](C(=O)CO)O)O)O)O"  
SDD  SMILES            "OpenEye OEToolkits"  1.7.6  "C(C(C(C(C(=O)CO)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SDD  "SYSTEMATIC NAME"  ACDLabs               12.01  D-sorbose  
SDD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(3R,4S,5R)-1,3,4,5,6-pentakis(oxidanyl)hexan-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SDD  "Create component"  2012-02-11  PDBJ  
SDD  "Modify atom id"    2020-06-24  RCSB  
##
