data_T6D
#

_chem_comp.id                                   T6D
_chem_comp.name                                 "alpha-D-glucopyranosyl 6-O-decanoyl-alpha-D-glucopyranoside"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C22 H40 O12"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "trehalose 6-decanoate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-10-02
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       496.546
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    T6D
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6MNA
_chem_comp.pdbx_subcomponent_list               "U2D GLC"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
T6D  C1   C1   C  0  1  N  N  R  -28.134  11.520  31.851    3.044  -0.850   1.089  U2D  1  C1   polymer  1   1  
T6D  C2   C2   C  0  1  N  N  R  -28.769  10.089  32.096    4.021  -2.027   1.045  U2D  1  C2   polymer  1   2  
T6D  C3   C3   C  0  1  N  N  S  -29.898   9.786  31.060    3.748  -2.861  -0.211  U2D  1  C3   polymer  1   3  
T6D  C4   C4   C  0  1  N  N  S  -30.495  11.127  30.734    2.286  -3.319  -0.198  U2D  1  C4   polymer  1   4  
T6D  C5   C5   C  0  1  N  N  R  -29.346  11.785  29.878    1.376  -2.091  -0.107  U2D  1  C5   polymer  1   5  
T6D  C6   C6   C  0  1  N  N  N  -29.509  13.262  29.580   -0.084  -2.543  -0.034  U2D  1  C6   polymer  1   6  
T6D  CAX  C13  C  0  1  N  N  N  -29.206  13.564  27.223   -2.275  -1.605  -0.008  U2D  1  CAX  polymer  1   7  
T6D  CAY  C14  C  0  1  N  N  N  -29.401  15.034  26.900   -3.238  -0.446  -0.035  U2D  1  CAY  polymer  1   8  
T6D  CAZ  C15  C  0  1  N  N  N  -30.577  15.264  25.953   -4.672  -0.974   0.041  U2D  1  CAZ  polymer  1   9  
T6D  CBA  C16  C  0  1  N  N  N  -30.245  14.924  24.511   -5.650   0.203   0.013  U2D  1  CBA  polymer  1  10  
T6D  CBB  C17  C  0  1  N  N  N  -30.873  13.581  24.043   -7.085  -0.325   0.089  U2D  1  CBB  polymer  1  11  
T6D  CBC  C18  C  0  1  N  N  N  -30.528  13.660  22.554   -8.063   0.851   0.061  U2D  1  CBC  polymer  1  12  
T6D  CBD  C19  C  0  1  N  N  N  -30.838  12.327  21.934   -9.497   0.324   0.138  U2D  1  CBD  polymer  1  13  
T6D  CBE  C20  C  0  1  N  N  N  -30.209  12.355  20.492  -10.475   1.500   0.109  U2D  1  CBE  polymer  1  14  
T6D  CBF  C21  C  0  1  N  N  N  -30.919  13.462  19.730  -11.909   0.973   0.186  U2D  1  CBF  polymer  1  15  
T6D  CBG  C22  C  0  1  N  N  N  -32.453  13.233  19.659  -12.887   2.149   0.158  U2D  1  CBG  polymer  1  16  
T6D  O11  O2   O  0  1  N  N  N  -30.466  12.892  27.177   -2.692  -2.736   0.065  U2D  1  O11  polymer  1  17  
T6D  O2   O3   O  0  1  N  N  N  -27.813   9.014  32.014    5.362  -1.534   1.010  U2D  1  O2   polymer  1  18  
T6D  O3   O4   O  0  1  N  N  N  -30.848   8.791  31.531    4.606  -4.003  -0.222  U2D  1  O3   polymer  1  19  
T6D  O4   O5   O  0  1  N  N  N  -31.722  11.024  29.987    2.001  -4.038  -1.400  U2D  1  O4   polymer  1  20  
T6D  O5   O6   O  0  1  N  N  N  -27.998  11.704  30.462    1.703  -1.344   1.067  U2D  1  O5   polymer  1  21  
T6D  O6   O7   O  0  1  N  N  N  -28.580  13.495  28.516   -0.953  -1.380  -0.064  U2D  1  O6   polymer  1  22  
T6D  CAA  C7   C  0  1  N  N  R  -27.047  12.338  33.808    2.560   1.236   0.011  GLC  2  C1   polymer  1  23  
T6D  CAV  C12  C  0  1  N  N  R  -25.802  13.152  34.172    2.660   1.940  -1.345  GLC  2  C2   polymer  1  24  
T6D  CAT  C11  C  0  1  N  N  S  -24.604  12.221  34.306    4.130   2.248  -1.645  GLC  2  C3   polymer  1  25  
T6D  CAR  C10  C  0  1  N  N  S  -24.919  11.141  35.348    4.706   3.095  -0.506  GLC  2  C4   polymer  1  26  
T6D  CAO  C8   C  0  1  N  N  R  -26.189  10.366  34.940    4.527   2.346   0.817  GLC  2  C5   polymer  1  27  
T6D  CAP  C9   C  0  1  N  N  N  -26.623   9.362  35.991    5.045   3.211   1.968  GLC  2  C6   polymer  1  28  
T6D  O1   O1   O  0  1  N  N  N  -26.871  11.713  32.544    3.260  -0.008  -0.046  GLC  2  O1   polymer  1  29  
T6D  OAW  O12  O  0  1  N  N  N  -25.570  14.163  33.163    2.132   1.090  -2.365  GLC  2  O2   polymer  1  30  
T6D  OAU  O11  O  0  1  N  N  N  -23.465  12.979  34.742    4.226   2.970  -2.874  GLC  2  O3   polymer  1  31  
T6D  OAS  O10  O  0  1  N  N  N  -23.796  10.251  35.450    6.096   3.327  -0.739  GLC  2  O4   polymer  1  32  
T6D  OAN  O8   O  0  1  N  N  N  -27.289  11.305  34.802    3.141   2.064   1.020  GLC  2  O5   polymer  1  33  
T6D  OAQ  O9   O  0  1  N  N  N  -25.561   8.372  36.037    4.986   2.468   3.187  GLC  2  O6   polymer  1  34  
T6D  H1   H1   H  0  1  N  N  N  -28.855  12.256  32.238    3.205  -0.277   2.002  U2D  1  H1   polymer  1  35  
T6D  H21  H2   H  0  1  N  N  N  -29.225  10.096  33.097    3.884  -2.647   1.931  U2D  1  H2   polymer  1  36  
T6D  H31  H3   H  0  1  N  N  N  -29.411   9.402  30.151    3.934  -2.256  -1.098  U2D  1  H3   polymer  1  37  
T6D  H41  H4   H  0  1  N  N  N  -30.640  11.711  31.655    2.114  -3.965   0.663  U2D  1  H4   polymer  1  38  
T6D  H5   H5   H  0  1  N  N  N  -29.329  11.256  28.914    1.519  -1.466  -0.988  U2D  1  H5   polymer  1  39  
T6D  H62  H6   H  0  1  N  N  N  -29.258  13.871  30.461   -0.308  -3.187  -0.884  U2D  1  H62  polymer  1  40  
T6D  H61  H7   H  0  1  N  N  N  -30.537  13.487  29.260   -0.248  -3.094   0.892  U2D  1  H61  polymer  1  41  
T6D  H64  H16  H  0  1  N  N  N  -28.485  15.418  26.427   -3.045   0.207   0.816  U2D  1  H64  polymer  1  42  
T6D  HAY  H17  H  0  1  N  N  N  -29.587  15.581  27.836   -3.106   0.114  -0.961  U2D  1  HAY  polymer  1  43  
T6D  H65  H18  H  0  1  N  N  N  -30.869  16.323  26.006   -4.865  -1.627  -0.810  U2D  1  H65  polymer  1  44  
T6D  HAZ  H19  H  0  1  N  N  N  -31.418  14.634  26.278   -4.805  -1.534   0.966  U2D  1  HAZ  polymer  1  45  
T6D  H66  H20  H  0  1  N  N  N  -29.152  14.854  24.410   -5.458   0.856   0.864  U2D  1  H66  polymer  1  46  
T6D  HBA  H21  H  0  1  N  N  N  -30.622  15.731  23.865   -5.518   0.763  -0.913  U2D  1  HBA  polymer  1  47  
T6D  HBB  H22  H  0  1  N  N  N  -31.959  13.552  24.214   -7.277  -0.978  -0.762  U2D  1  HBB  polymer  1  48  
T6D  H67  H23  H  0  1  N  N  N  -30.402  12.714  24.530   -7.217  -0.885   1.015  U2D  1  H67  polymer  1  49  
T6D  HBC  H24  H  0  1  N  N  N  -29.459  13.890  22.430   -7.870   1.505   0.912  U2D  1  HBC  polymer  1  50  
T6D  H68  H25  H  0  1  N  N  N  -31.130  14.445  22.072   -7.931   1.412  -0.864  U2D  1  H68  polymer  1  51  
T6D  H69  H26  H  0  1  N  N  N  -31.926  12.179  21.872   -9.690  -0.329  -0.714  U2D  1  H69  polymer  1  52  
T6D  HBD  H27  H  0  1  N  N  N  -30.391  11.517  22.529   -9.629  -0.236   1.063  U2D  1  HBD  polymer  1  53  
T6D  HBE  H28  H  0  1  N  N  N  -30.366  11.388  19.991  -10.282   2.153   0.961  U2D  1  HBE  polymer  1  54  
T6D  H7A  H29  H  0  1  N  N  N  -29.131  12.567  20.552  -10.343   2.061  -0.816  U2D  1  H7A  polymer  1  55  
T6D  H7B  H30  H  0  1  N  N  N  -30.519  13.501  18.706  -12.102   0.320  -0.665  U2D  1  H7B  polymer  1  56  
T6D  HBF  H31  H  0  1  N  N  N  -30.727  14.420  20.235  -12.041   0.412   1.111  U2D  1  HBF  polymer  1  57  
T6D  H7G  H32  H  0  1  N  N  N  -32.922  14.056  19.100  -13.909   1.773   0.212  U2D  1  H7G  polymer  1  58  
T6D  H7C  H33  H  0  1  N  N  N  -32.658  12.280  19.149  -12.695   2.802   1.009  U2D  1  H7C  polymer  1  59  
T6D  HBG  H34  H  0  1  N  N  N  -32.866  13.200  20.678  -12.755   2.710  -0.768  U2D  1  HBG  polymer  1  60  
T6D  H22  H36  H  0  1  N  N  N  -27.110   9.167  32.634    5.602  -0.993   1.775  U2D  1  HO2  polymer  1  61  
T6D  H32  H37  H  0  1  N  N  N  -30.392   7.978  31.713    5.549  -3.787  -0.223  U2D  1  HO3  polymer  1  62  
T6D  H42  H38  H  0  1  N  N  N  -32.391  10.625  30.530    2.545  -4.827  -1.525  U2D  1  HO4  polymer  1  63  
T6D  HAA  H8   H  0  1  N  N  N  -27.909  13.020  33.772    1.512   1.053   0.249  GLC  2  H1   polymer  1  64  
T6D  HAV  H14  H  0  1  N  N  N  -25.977  13.637  35.144    2.092   2.870  -1.315  GLC  2  H2   polymer  1  65  
T6D  HAT  H13  H  0  1  N  N  N  -24.403  11.742  33.336    4.690   1.316  -1.725  GLC  2  H3   polymer  1  66  
T6D  HAR  H12  H  0  1  N  N  N  -25.102  11.629  36.317    4.180   4.049  -0.458  GLC  2  H4   polymer  1  67  
T6D  HAO  H9   H  0  1  N  N  N  -26.006   9.846  33.988    5.087   1.411   0.785  GLC  2  H5   polymer  1  68  
T6D  H63  H10  H  0  1  N  N  N  -26.735   9.852  36.969    6.077   3.501   1.768  GLC  2  H61  polymer  1  69  
T6D  HAP  H11  H  0  1  N  N  N  -27.576   8.892  35.705    4.428   4.105   2.057  GLC  2  H62  polymer  1  70  
T6D  HAW  H42  H  0  1  N  N  N  -24.797  14.667  33.391    1.204   0.850  -2.236  GLC  2  HO2  polymer  1  71  
T6D  HAU  H41  H  0  1  N  N  N  -22.714  12.403  34.827    3.879   2.492  -3.639  GLC  2  HO3  polymer  1  72  
T6D  HAS  H40  H  0  1  N  N  N  -23.982   9.578  36.094    6.284   3.798  -1.562  GLC  2  HO4  polymer  1  73  
T6D  HAQ  H39  H  0  1  N  N  N  -25.774   7.708  36.683    5.300   2.956   3.961  GLC  2  HO6  polymer  1  74  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T6D  CBG  CBF  SING  N  N   1  
T6D  CBF  CBE  SING  N  N   2  
T6D  CBE  CBD  SING  N  N   3  
T6D  CBD  CBC  SING  N  N   4  
T6D  CBC  CBB  SING  N  N   5  
T6D  CBB  CBA  SING  N  N   6  
T6D  CBA  CAZ  SING  N  N   7  
T6D  CAZ  CAY  SING  N  N   8  
T6D  CAY  CAX  SING  N  N   9  
T6D  O11  CAX  DOUB  N  N  10  
T6D  CAX  O6   SING  N  N  11  
T6D  O6   C6   SING  N  N  12  
T6D  C6   C5   SING  N  N  13  
T6D  C5   O5   SING  N  N  14  
T6D  C5   C4   SING  N  N  15  
T6D  O4   C4   SING  N  N  16  
T6D  O5   C1   SING  N  N  17  
T6D  C4   C3   SING  N  N  18  
T6D  C3   O3   SING  N  N  19  
T6D  C3   C2   SING  N  N  20  
T6D  C1   C2   SING  N  N  21  
T6D  C1   O1   SING  N  N  22  
T6D  O2   C2   SING  N  N  23  
T6D  O1   CAA  SING  N  N  24  
T6D  OAW  CAV  SING  N  N  25  
T6D  CAA  CAV  SING  N  N  26  
T6D  CAA  OAN  SING  N  N  27  
T6D  CAV  CAT  SING  N  N  28  
T6D  CAT  OAU  SING  N  N  29  
T6D  CAT  CAR  SING  N  N  30  
T6D  OAN  CAO  SING  N  N  31  
T6D  CAO  CAR  SING  N  N  32  
T6D  CAO  CAP  SING  N  N  33  
T6D  CAR  OAS  SING  N  N  34  
T6D  CAP  OAQ  SING  N  N  35  
T6D  C1   H1   SING  N  N  36  
T6D  C2   H21  SING  N  N  37  
T6D  C3   H31  SING  N  N  38  
T6D  C4   H41  SING  N  N  39  
T6D  C5   H5   SING  N  N  40  
T6D  C6   H62  SING  N  N  41  
T6D  C6   H61  SING  N  N  42  
T6D  CAA  HAA  SING  N  N  43  
T6D  CAO  HAO  SING  N  N  44  
T6D  CAP  H63  SING  N  N  45  
T6D  CAP  HAP  SING  N  N  46  
T6D  CAR  HAR  SING  N  N  47  
T6D  CAT  HAT  SING  N  N  48  
T6D  CAV  HAV  SING  N  N  49  
T6D  CAY  H64  SING  N  N  50  
T6D  CAY  HAY  SING  N  N  51  
T6D  CAZ  H65  SING  N  N  52  
T6D  CAZ  HAZ  SING  N  N  53  
T6D  CBA  H66  SING  N  N  54  
T6D  CBA  HBA  SING  N  N  55  
T6D  CBB  HBB  SING  N  N  56  
T6D  CBB  H67  SING  N  N  57  
T6D  CBC  HBC  SING  N  N  58  
T6D  CBC  H68  SING  N  N  59  
T6D  CBD  H69  SING  N  N  60  
T6D  CBD  HBD  SING  N  N  61  
T6D  CBE  HBE  SING  N  N  62  
T6D  CBE  H7A  SING  N  N  63  
T6D  CBF  H7B  SING  N  N  64  
T6D  CBF  HBF  SING  N  N  65  
T6D  CBG  H7G  SING  N  N  66  
T6D  CBG  H7C  SING  N  N  67  
T6D  CBG  HBG  SING  N  N  68  
T6D  O2   H22  SING  N  N  69  
T6D  O3   H32  SING  N  N  70  
T6D  O4   H42  SING  N  N  71  
T6D  OAQ  HAQ  SING  N  N  72  
T6D  OAS  HAS  SING  N  N  73  
T6D  OAU  HAU  SING  N  N  74  
T6D  OAW  HAW  SING  N  N  75  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T6D  SMILES            ACDLabs               12.01  "C1(C(C(O)C(C(O1)COC(CCCCCCCCC)=O)O)O)OC2C(C(C(C(CO)O2)O)O)O"  
T6D  InChI             InChI                 1.03   "InChI=1S/C22H40O12/c1-2-3-4-5-6-7-8-9-14(24)31-11-13-16(26)18(28)20(30)22(33-13)34-21-19(29)17(27)15(25)12(10-23)32-21/h12-13,15-23,25-30H,2-11H2,1H3/t12-,13-,15-,16-,17+,18+,19-,20-,21-,22-/m1/s1"  
T6D  InChIKey          InChI                 1.03   NWUMPUQFMKERLR-KWOKUELKSA-N  
T6D  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCCCC(=O)OC[C@H]1O[C@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O"  
T6D  SMILES            CACTVS                3.385  "CCCCCCCCCC(=O)OC[CH]1O[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O"  
T6D  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCCCCCCCCC(=O)OC[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)O"  
T6D  SMILES            "OpenEye OEToolkits"  2.0.6  "CCCCCCCCCC(=O)OCC1C(C(C(C(O1)OC2C(C(C(C(O2)CO)O)O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T6D  "SYSTEMATIC NAME"  ACDLabs               12.01  "alpha-D-glucopyranosyl 6-O-decanoyl-alpha-D-glucopyranoside"  
T6D  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "[(2~{R},3~{S},4~{S},5~{R},6~{R})-6-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3,4,5-tris(oxidanyl)oxan-2-yl]methyl decanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T6D  "Create component"    2018-10-02  RCSB  
T6D  "Other modification"  2018-10-11  RCSB  
T6D  "Initial release"     2019-09-18  RCSB  
T6D  "Other modification"  2020-07-03  RCSB  
T6D  "Obsolete component"  2020-07-17  RCSB  
##
