data_ZVD
# 
_chem_comp.id                                    ZVD 
_chem_comp.name                                  "N-[(2R)-2-fluoro-3-hydroxy-3-methylbutyl]-6-[(5-fluoropyrimidin-4-yl)amino]-4-[(propan-2-yl)amino]pyridine-3-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H24 F2 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-04-06 
_chem_comp.pdbx_modified_date                    2025-02-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        394.419 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZVD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8SCE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZVD C13 C1  C 0 1 N N N N N N 32.439 8.438  19.935 1.746  0.840  -0.013 C13 ZVD 1  
ZVD C18 C2  C 0 1 N N N N N N 27.066 9.979  21.863 6.781  -2.765 0.149  C18 ZVD 2  
ZVD C17 C3  C 0 1 N N N N N N 28.940 11.431 22.757 6.586  -0.586 -1.058 C17 ZVD 3  
ZVD C16 C4  C 0 1 N N N N N N 28.593 10.041 22.179 6.143  -1.375 0.175  C16 ZVD 4  
ZVD C15 C5  C 0 1 N N R N N N 29.395 9.705  20.891 4.619  -1.513 0.171  C15 ZVD 5  
ZVD C11 C6  C 0 1 Y N N N N N 33.868 9.351  18.112 -0.317 -0.554 -0.065 C11 ZVD 6  
ZVD C12 C7  C 0 1 Y N N N N N 33.294 8.238  18.769 0.280  0.706  -0.023 C12 ZVD 7  
ZVD F2  F1  F 0 1 N N N N N N 29.267 8.363  20.662 4.224  -2.288 -0.925 F2  ZVD 8  
ZVD O2  O1  O 0 1 N N N N N N 28.996 9.117  23.153 6.555  -0.684 1.356  O2  ZVD 9  
ZVD C14 C8  C 0 1 N N N N N N 30.920 10.028 21.084 3.981  -0.126 0.072  C14 ZVD 10 
ZVD N6  N1  N 0 1 N N N N N N 31.738 9.634  19.992 2.522  -0.259 0.068  N6  ZVD 11 
ZVD O1  O2  O 0 1 N N N N N N 32.260 7.537  20.775 2.256  1.941  -0.083 O1  ZVD 12 
ZVD C7  C9  C 0 1 Y N N N N N 33.609 6.932  18.249 -0.546 1.851  0.010  C7  ZVD 13 
ZVD N4  N2  N 0 1 N N N N N N 33.064 5.794  18.821 0.002  3.123  0.051  N4  ZVD 14 
ZVD C8  C10 C 0 1 N N N N N N 33.260 4.417  18.304 -0.868 4.291  0.207  C8  ZVD 15 
ZVD C10 C11 C 0 1 N N N N N N 32.193 3.465  18.869 -0.073 5.439  0.832  C10 ZVD 16 
ZVD C9  C12 C 0 1 N N N N N N 34.659 3.952  18.728 -1.394 4.722  -1.164 C9  ZVD 17 
ZVD C6  C13 C 0 1 Y N N N N N 34.482 6.896  17.122 -1.923 1.668  -0.001 C6  ZVD 18 
ZVD N5  N3  N 0 1 Y N N N N N 34.667 9.324  17.053 -1.628 -0.677 -0.079 N5  ZVD 19 
ZVD C5  C14 C 0 1 Y N N N N N 34.975 8.129  16.561 -2.434 0.377  -0.044 C5  ZVD 20 
ZVD N3  N4  N 0 1 N N N N N N 35.726 8.090  15.397 -3.808 0.187  -0.061 N3  ZVD 21 
ZVD C4  C15 C 0 1 Y N N N N N 36.384 7.075  14.798 -4.332 -1.097 0.006  C4  ZVD 22 
ZVD C1  C16 C 0 1 Y N N N N N 36.786 7.239  13.460 -5.713 -1.298 0.091  C1  ZVD 23 
ZVD F1  F2  F 0 1 N N N N N N 36.451 8.286  12.775 -6.565 -0.250 0.110  F1  ZVD 24 
ZVD N2  N5  N 0 1 Y N N N N N 36.704 5.930  15.498 -3.529 -2.156 -0.016 N2  ZVD 25 
ZVD C3  C17 C 0 1 Y N N N N N 37.341 4.976  14.780 -4.022 -3.377 0.047  C3  ZVD 26 
ZVD N1  N6  N 0 1 Y N N N N N 37.684 5.034  13.471 -5.318 -3.600 0.133  N1  ZVD 27 
ZVD C2  C18 C 0 1 Y N N N N N 37.421 6.175  12.824 -6.184 -2.596 0.155  C2  ZVD 28 
ZVD H23 H1  H 0 1 N N N N N N 26.493 10.216 22.772 7.867  -2.666 0.152  H23 ZVD 29 
ZVD H21 H2  H 0 1 N N N N N N 26.825 10.709 21.076 6.465  -3.327 1.028  H21 ZVD 30 
ZVD H22 H3  H 0 1 N N N N N N 26.804 8.968  21.518 6.467  -3.292 -0.752 H22 ZVD 31 
ZVD H20 H4  H 0 1 N N N N N N 28.343 11.611 23.663 6.272  -1.113 -1.959 H20 ZVD 32 
ZVD H19 H5  H 0 1 N N N N N N 30.010 11.466 23.009 6.131  0.404  -1.039 H19 ZVD 33 
ZVD H18 H6  H 0 1 N N N N N N 28.714 12.206 22.009 7.672  -0.487 -1.055 H18 ZVD 34 
ZVD H17 H7  H 0 1 N N N N N N 29.005 10.304 20.055 4.295  -1.997 1.093  H17 ZVD 35 
ZVD H13 H8  H 0 1 N N N N N N 33.631 10.325 18.514 0.302  -1.438 -0.090 H13 ZVD 36 
ZVD H24 H9  H 0 1 N N N N N N 28.528 9.285  23.963 6.306  -1.128 2.179  H24 ZVD 37 
ZVD H15 H10 H 0 1 N N N N N N 31.272 9.506  21.986 4.288  0.477  0.926  H15 ZVD 38 
ZVD H16 H11 H 0 1 N N N N N N 31.028 11.114 21.223 4.304  0.357  -0.850 H16 ZVD 39 
ZVD H14 H12 H 0 1 N N N N N N 31.814 10.258 19.215 2.115  -1.138 0.124  H14 ZVD 40 
ZVD H5  H13 H 0 1 N N N N N N 33.401 5.778  19.762 0.962  3.240  -0.023 H5  ZVD 41 
ZVD H6  H14 H 0 1 N N N N N N 33.197 4.418  17.206 -1.707 4.036  0.854  H6  ZVD 42 
ZVD H10 H15 H 0 1 N N N N N N 31.195 3.807  18.559 -0.720 6.309  0.948  H10 ZVD 43 
ZVD H11 H16 H 0 1 N N N N N N 32.368 2.449  18.485 0.302  5.133  1.808  H11 ZVD 44 
ZVD H12 H17 H 0 1 N N N N N N 32.253 3.457  19.967 0.766  5.695  0.185  H12 ZVD 45 
ZVD H9  H18 H 0 1 N N N N N N 34.834 2.931  18.358 -1.960 3.904  -1.609 H9  ZVD 46 
ZVD H8  H19 H 0 1 N N N N N N 35.415 4.630  18.305 -2.041 5.591  -1.048 H8  ZVD 47 
ZVD H7  H20 H 0 1 N N N N N N 34.732 3.962  19.826 -0.555 4.977  -1.811 H7  ZVD 48 
ZVD H4  H21 H 0 1 N N N N N N 34.772 5.949  16.691 -2.589 2.518  0.023  H4  ZVD 49 
ZVD HN3 H22 H 0 1 N N N N N N 35.792 8.965  14.918 -4.403 0.951  -0.119 HN3 ZVD 50 
ZVD H3  H23 H 0 1 N N N N N N 37.604 4.071  15.308 -3.345 -4.218 0.026  H3  ZVD 51 
ZVD H2  H24 H 0 1 N N N N N N 37.707 6.273  11.787 -7.244 -2.791 0.222  H2  ZVD 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZVD F1  C1  SING N N 1  
ZVD C2  C1  DOUB Y N 2  
ZVD C2  N1  SING Y N 3  
ZVD C1  C4  SING Y N 4  
ZVD N1  C3  DOUB Y N 5  
ZVD C3  N2  SING Y N 6  
ZVD C4  N3  SING N N 7  
ZVD C4  N2  DOUB Y N 8  
ZVD N3  C5  SING N N 9  
ZVD C5  N5  DOUB Y N 10 
ZVD C5  C6  SING Y N 11 
ZVD N5  C11 SING Y N 12 
ZVD C6  C7  DOUB Y N 13 
ZVD C11 C12 DOUB Y N 14 
ZVD C7  C12 SING Y N 15 
ZVD C7  N4  SING N N 16 
ZVD C8  C9  SING N N 17 
ZVD C8  N4  SING N N 18 
ZVD C8  C10 SING N N 19 
ZVD C12 C13 SING N N 20 
ZVD C13 N6  SING N N 21 
ZVD C13 O1  DOUB N N 22 
ZVD N6  C14 SING N N 23 
ZVD F2  C15 SING N N 24 
ZVD C15 C14 SING N N 25 
ZVD C15 C16 SING N N 26 
ZVD C18 C16 SING N N 27 
ZVD C16 C17 SING N N 28 
ZVD C16 O2  SING N N 29 
ZVD C18 H23 SING N N 30 
ZVD C18 H21 SING N N 31 
ZVD C18 H22 SING N N 32 
ZVD C17 H20 SING N N 33 
ZVD C17 H19 SING N N 34 
ZVD C17 H18 SING N N 35 
ZVD C15 H17 SING N N 36 
ZVD C11 H13 SING N N 37 
ZVD O2  H24 SING N N 38 
ZVD C14 H15 SING N N 39 
ZVD C14 H16 SING N N 40 
ZVD N6  H14 SING N N 41 
ZVD N4  H5  SING N N 42 
ZVD C8  H6  SING N N 43 
ZVD C10 H10 SING N N 44 
ZVD C10 H11 SING N N 45 
ZVD C10 H12 SING N N 46 
ZVD C9  H9  SING N N 47 
ZVD C9  H8  SING N N 48 
ZVD C9  H7  SING N N 49 
ZVD C6  H4  SING N N 50 
ZVD N3  HN3 SING N N 51 
ZVD C3  H3  SING N N 52 
ZVD C2  H2  SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZVD SMILES           ACDLabs              12.01 "Fc1cncnc1Nc1cc(NC(C)C)c(cn1)C(=O)NCC(F)C(C)(C)O"                                                                                                                            
ZVD InChI            InChI                1.06  "InChI=1S/C18H24F2N6O2/c1-10(2)25-13-5-15(26-16-12(19)7-21-9-24-16)22-6-11(13)17(27)23-8-14(20)18(3,4)28/h5-7,9-10,14,28H,8H2,1-4H3,(H,23,27)(H2,21,22,24,25,26)/t14-/m1/s1" 
ZVD InChIKey         InChI                1.06  STMUIBGUZVAURD-CQSZACIVSA-N                                                                                                                                                  
ZVD SMILES_CANONICAL CACTVS               3.385 "CC(C)Nc1cc(Nc2ncncc2F)ncc1C(=O)NC[C@@H](F)C(C)(C)O"                                                                                                                         
ZVD SMILES           CACTVS               3.385 "CC(C)Nc1cc(Nc2ncncc2F)ncc1C(=O)NC[CH](F)C(C)(C)O"                                                                                                                           
ZVD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)Nc1cc(ncc1C(=O)NC[C@H](C(C)(C)O)F)Nc2c(cncn2)F"                                                                                                                        
ZVD SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)Nc1cc(ncc1C(=O)NCC(C(C)(C)O)F)Nc2c(cncn2)F"                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZVD "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(2R)-2-fluoro-3-hydroxy-3-methylbutyl]-6-[(5-fluoropyrimidin-4-yl)amino]-4-[(propan-2-yl)amino]pyridine-3-carboxamide"             
ZVD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R})-2-fluoranyl-3-methyl-3-oxidanyl-butyl]-6-[(5-fluoranylpyrimidin-4-yl)amino]-4-(propan-2-ylamino)pyridine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZVD "Create component" 2023-04-06 RCSB 
ZVD "Initial release"  2025-02-12 RCSB 
# 
