data_FJF
#

_chem_comp.id                                   FJF
_chem_comp.name                                 "5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H12 N2 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-05-20
_chem_comp.pdbx_modified_date                   2020-11-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       244.201
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    FJF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7C1Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FJF  O01  O1   O  0  1  N  N  N  11.352   -7.294  47.166  -4.839   0.524  -0.391  O01  FJF   1  
FJF  C02  C1   C  0  1  N  N  N  10.381   -7.983  46.903  -3.675   0.289  -0.127  C02  FJF   2  
FJF  N03  N1   N  0  1  N  N  N   9.061   -7.399  46.690  -3.375  -0.422   0.975  N03  FJF   3  
FJF  C04  C2   C  0  1  N  N  N   7.944   -8.212  46.352  -2.073  -0.699   1.292  C04  FJF   4  
FJF  C05  C3   C  0  1  N  N  N   8.095   -9.658  46.227  -1.080  -0.254   0.493  C05  FJF   5  
FJF  C06  C4   C  0  1  N  N  N   9.429  -10.233  46.433  -1.410   0.493  -0.664  C06  FJF   6  
FJF  O07  O2   O  0  1  N  N  N   9.594  -11.427  46.330  -0.532   0.905  -1.401  O07  FJF   7  
FJF  N08  N2   N  0  1  N  N  N  10.530   -9.410  46.770  -2.706   0.741  -0.945  N08  FJF   8  
FJF  C09  C5   C  0  1  N  N  S   6.924  -10.558  45.874   0.359  -0.548   0.827  C09  FJF   9  
FJF  O10  O3   O  0  1  N  N  N   6.334  -10.126  44.829   1.117   0.674   0.840  O10  FJF  10  
FJF  C11  C6   C  0  1  N  N  R   5.006  -11.031  44.896   2.440   0.354   0.358  C11  FJF  11  
FJF  C12  C7   C  0  1  N  N  N   4.026  -10.620  43.797   3.142   1.610  -0.163  C12  FJF  12  
FJF  O13  O4   O  0  1  N  N  N   4.696  -10.588  42.543   3.388   2.504   0.925  O13  FJF  13  
FJF  C14  C8   C  0  1  N  N  S   4.546  -10.851  46.084   2.172  -0.641  -0.800  C14  FJF  14  
FJF  O15  O5   O  0  1  N  N  N   3.913  -12.122  46.637   3.305  -1.485  -1.020  O15  FJF  15  
FJF  C16  C9   C  0  1  N  N  R   5.760  -10.472  46.920   0.974  -1.456  -0.256  C16  FJF  16  
FJF  O17  O6   O  0  1  N  N  N   5.923  -11.324  47.983   1.423  -2.685   0.318  O17  FJF  17  
FJF  H1   H1   H  0  1  N  N  N   6.979   -7.757  46.187  -1.840  -1.270   2.179  H1   FJF  18  
FJF  H3   H3   H  0  1  N  N  N  11.427   -9.826  46.918  -2.940   1.252  -1.735  H3   FJF  19  
FJF  H4   H4   H  0  1  N  N  N   7.264  -11.601  45.795   0.422  -1.036   1.799  H4   FJF  20  
FJF  H5   H5   H  0  1  N  N  N   5.307  -12.075  44.722   3.031  -0.119   1.142  H5   FJF  21  
FJF  H6   H6   H  0  1  N  N  N   3.623   -9.621  44.022   4.089   1.332  -0.626  H6   FJF  22  
FJF  H7   H7   H  0  1  N  N  N   3.201  -11.347  43.752   2.507   2.101  -0.901  H7   FJF  23  
FJF  H8   H8   H  0  1  N  N  N   4.084  -10.332  41.863   3.831   3.324   0.667  H8   FJF  24  
FJF  H9   H9   H  0  1  N  N  N   3.810  -10.035  46.133   1.901  -0.112  -1.713  H9   FJF  25  
FJF  H10  H10  H  0  1  N  N  N   3.584  -11.957  47.513   4.106  -1.008  -1.275  H10  FJF  26  
FJF  H11  H11  H  0  1  N  N  N   5.661   -9.428  47.252   0.251  -1.647  -1.049  H11  FJF  27  
FJF  H12  H12  H  0  1  N  N  N   5.191  -11.229  48.581   1.819  -3.295  -0.319  H12  FJF  28  
FJF  H13  H13  H  0  1  N  N  N   8.940   -6.411  46.783  -4.088  -0.742   1.549  H13  FJF  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FJF  O13  C12  SING  N  N   1  
FJF  C12  C11  SING  N  N   2  
FJF  O10  C11  SING  N  N   3  
FJF  O10  C09  SING  N  N   4  
FJF  C11  C14  SING  N  N   5  
FJF  C09  C05  SING  N  N   6  
FJF  C09  C16  SING  N  N   7  
FJF  C14  O15  SING  N  N   8  
FJF  C14  C16  SING  N  N   9  
FJF  C05  C04  DOUB  N  N  10  
FJF  C05  C06  SING  N  N  11  
FJF  O07  C06  DOUB  N  N  12  
FJF  C04  N03  SING  N  N  13  
FJF  C06  N08  SING  N  N  14  
FJF  N03  C02  SING  N  N  15  
FJF  N08  C02  SING  N  N  16  
FJF  C02  O01  DOUB  N  N  17  
FJF  C16  O17  SING  N  N  18  
FJF  C04  H1   SING  N  N  19  
FJF  N08  H3   SING  N  N  20  
FJF  C09  H4   SING  N  N  21  
FJF  C11  H5   SING  N  N  22  
FJF  C12  H6   SING  N  N  23  
FJF  C12  H7   SING  N  N  24  
FJF  O13  H8   SING  N  N  25  
FJF  C14  H9   SING  N  N  26  
FJF  O15  H10  SING  N  N  27  
FJF  C16  H11  SING  N  N  28  
FJF  O17  H12  SING  N  N  29  
FJF  N03  H13  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FJF  InChI             InChI                 1.03   "InChI=1S/C9H12N2O6/c12-2-4-5(13)6(14)7(17-4)3-1-10-9(16)11-8(3)15/h1,4-7,12-14H,2H2,(H2,10,11,15,16)/t4-,5-,6-,7+/m1/s1"  
FJF  InChIKey          InChI                 1.03   PTJWIQPHWPFNBW-GBNDHIKLSA-N  
FJF  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)C2=CNC(=O)NC2=O"  
FJF  SMILES            CACTVS                3.385  "OC[CH]1O[CH]([CH](O)[CH]1O)C2=CNC(=O)NC2=O"  
FJF  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1=C(C(=O)NC(=O)N1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O"  
FJF  SMILES            "OpenEye OEToolkits"  2.0.7  "C1=C(C(=O)NC(=O)N1)C2C(C(C(O2)CO)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          FJF
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FJF  "Create component"  2020-05-20  PDBJ  
FJF  "Initial release"   2020-11-18  RCSB  
##
