data_UQF
# 
_chem_comp.id                                    UQF 
_chem_comp.name                                  "1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]guanidine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H36 N14 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-06 
_chem_comp.pdbx_modified_date                    2025-03-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        668.664 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UQF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QG8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UQF N1  N1  N 0 1 N N N N N N 13.113 3.515  9.319  -2.020 3.559  3.679  N1  UQF 1  
UQF C7  C1  C 0 1 Y N N N N N 18.409 11.305 12.773 4.479  1.041  -0.960 C7  UQF 2  
UQF C8  C2  C 0 1 Y N N N N N 20.268 12.254 12.343 6.602  1.086  -0.492 C8  UQF 3  
UQF N2  N2  N 0 1 N N N N N N 12.939 5.646  10.469 -2.035 3.973  1.397  N2  UQF 4  
UQF C9  C3  C 0 1 Y N N N N N 20.598 11.082 13.004 6.060  -0.050 0.136  C9  UQF 5  
UQF O1  O1  O 0 1 N N N N N N 16.053 7.204  12.944 3.477  -2.564 4.251  O1  UQF 6  
UQF C1  C4  C 0 1 N N N N N N 13.242 6.454  11.650 -1.408 2.676  1.134  C1  UQF 7  
UQF O5  O2  O 0 1 N N N N N N 17.827 10.173 7.859  -5.686 -0.932 -3.229 O5  UQF 8  
UQF C5  C5  C 0 1 N N N N N N 15.850 10.849 12.855 2.156  1.701  -1.940 C5  UQF 9  
UQF C6  C6  C 0 1 N N N N N N 17.033 11.008 12.846 3.203  1.404  -1.498 C6  UQF 10 
UQF N3  N3  N 0 1 N N N N N N 13.997 9.522  11.934 -0.161 1.088  -2.076 N3  UQF 11 
UQF C4  C7  C 0 1 N N N N N N 14.396 10.642 12.784 0.844  2.074  -2.493 C4  UQF 12 
UQF O4  O3  O 0 1 N N N N N N 15.702 8.380  9.803  -2.711 -0.161 -1.370 O4  UQF 13 
UQF C3  C8  C 0 1 N N N N N N 12.803 8.887  12.512 -0.447 1.202  -0.640 C3  UQF 14 
UQF O3  O4  O 0 1 N N N N N N 19.075 9.422  16.126 3.062  -2.506 -1.585 O3  UQF 15 
UQF C2  C9  C 0 1 N N N N N N 12.311 7.654  11.767 -1.209 2.502  -0.373 C2  UQF 16 
UQF N4  N4  N 0 1 Y N N N N N 18.890 12.390 12.218 5.594  1.709  -1.141 N4  UQF 17 
UQF N   N5  N 0 1 N N N N N N 14.893 4.313  10.796 -2.903 5.570  2.935  N   UQF 18 
UQF C   C10 C 0 1 N N N N N N 13.632 4.426  10.153 -2.314 4.353  2.688  C   UQF 19 
UQF O   O5  O 0 1 N N N N N N 18.763 8.196  12.824 3.922  -1.369 1.657  O   UQF 20 
UQF C10 C11 C 0 1 Y N N N N N 22.753 11.435 12.736 8.142  -0.565 0.963  C10 UQF 21 
UQF C11 C12 C 0 1 Y N N N N N 21.331 13.031 11.855 7.978  1.335  -0.338 C11 UQF 22 
UQF C12 C13 C 0 1 N N R N N N 19.271 9.103  13.790 3.737  -1.051 0.260  C12 UQF 23 
UQF C13 C14 C 0 1 N N R N N N 18.403 6.997  13.552 3.283  -2.651 1.843  C13 UQF 24 
UQF C14 C15 C 0 1 N N N N N N 17.179 6.345  12.946 3.823  -3.337 3.100  C14 UQF 25 
UQF C15 C16 C 0 1 N N S N N N 18.294 7.403  15.034 3.657  -3.464 0.584  C15 UQF 26 
UQF C16 C17 C 0 1 N N R N N N 18.367 8.929  14.995 3.962  -2.387 -0.481 C16 UQF 27 
UQF C17 C18 C 0 1 N N N N N N 13.900 9.831  10.491 -1.390 1.221  -2.870 C17 UQF 28 
UQF C18 C19 C 0 1 N N R N N N 15.265 9.751  9.816  -2.234 -0.047 -2.722 C18 UQF 29 
UQF C19 C20 C 0 1 N N R N N N 16.789 8.285  8.905  -4.018 -0.770 -1.435 C19 UQF 30 
UQF C20 C21 C 0 1 N N R N N N 16.632 9.402  7.872  -4.670 -0.097 -2.670 C20 UQF 31 
UQF C21 C22 C 0 1 N N S N N N 15.391 10.179 8.352  -3.470 0.036  -3.638 C21 UQF 32 
UQF C22 C23 C 0 1 Y N N N N N 15.757 6.300  7.709  -4.595 0.583  0.615  C22 UQF 33 
UQF C23 C24 C 0 1 Y N N N N N 17.406 4.967  7.592  -6.248 -0.550 1.443  C23 UQF 34 
UQF C24 C25 C 0 1 Y N N N N N 17.863 6.091  8.260  -5.831 -1.211 0.276  C24 UQF 35 
UQF C25 C26 C 0 1 Y N N N N N 19.905 5.292  8.385  -7.463 -2.795 0.610  C25 UQF 36 
UQF C26 C27 C 0 1 Y N N N N N 18.347 3.954  7.330  -7.322 -1.097 2.167  C26 UQF 37 
UQF N10 N6  N 0 1 Y N N N N N 16.067 5.109  7.256  -5.456 0.539  1.590  N10 UQF 38 
UQF N11 N7  N 0 1 Y N N N N N 19.105 6.311  8.695  -6.461 -2.320 -0.099 N11 UQF 39 
UQF N12 N8  N 0 1 Y N N N N N 19.609 4.158  7.751  -7.890 -2.209 1.714  N12 UQF 40 
UQF N13 N9  N 0 1 N N N N N N 18.077 2.825  6.645  -7.777 -0.490 3.325  N13 UQF 41 
UQF N5  N10 N 0 1 Y N N N N N 21.828 10.621 13.248 6.860  -0.839 0.846  N5  UQF 42 
UQF N6  N11 N 0 1 Y N N N N N 22.587 12.579 12.064 8.697  0.489  0.392  N6  UQF 43 
UQF N7  N12 N 0 1 N N N N N N 21.164 14.178 11.194 8.569  2.436  -0.932 N7  UQF 44 
UQF N8  N13 N 0 1 Y N N N N N 19.399 10.453 13.268 4.722  -0.056 -0.171 N8  UQF 45 
UQF N9  N14 N 0 1 Y N N N N N 16.795 6.951  8.323  -4.785 -0.476 -0.222 N9  UQF 46 
UQF O2  O6  O 0 1 N N N N N N 19.487 6.991  15.667 2.558  -4.280 0.171  O2  UQF 47 
UQF O6  O7  O 0 1 N N N N N N 15.589 11.580 8.177  -3.466 -1.039 -4.581 O6  UQF 48 
UQF H6  H1  H 0 1 N N N N N N 12.220 3.795  8.968  -1.604 2.699  3.505  H6  UQF 49 
UQF H7  H2  H 0 1 N N N N N N 12.216 5.957  9.852  -2.254 4.564  0.660  H7  UQF 50 
UQF H21 H3  H 0 1 N N N N N N 15.312 6.754  12.556 3.788  -2.940 5.085  H21 UQF 51 
UQF H9  H4  H 0 1 N N N N N N 13.131 5.828  12.548 -0.441 2.631  1.636  H9  UQF 52 
UQF H8  H5  H 0 1 N N N N N N 14.279 6.813  11.579 -2.049 1.879  1.510  H8  UQF 53 
UQF H29 H6  H 0 1 N N N N N N 17.746 10.873 7.221  -6.124 -0.553 -4.004 H29 UQF 54 
UQF H15 H8  H 0 1 N N N N N N 13.935 11.559 12.388 0.561  3.060  -2.124 H15 UQF 55 
UQF H14 H9  H 0 1 N N N N N N 14.023 10.454 13.802 0.902  2.097  -3.581 H14 UQF 56 
UQF H13 H10 H 0 1 N N N N N N 11.991 9.629  12.520 -1.054 0.354  -0.322 H13 UQF 57 
UQF H12 H11 H 0 1 N N N N N N 13.039 8.591  13.545 0.489  1.208  -0.083 H12 UQF 58 
UQF H25 H12 H 0 1 N N N N N N 19.112 10.371 16.088 3.118  -3.351 -2.050 H25 UQF 59 
UQF H11 H13 H 0 1 N N N N N N 12.061 7.971  10.744 -2.180 2.461  -0.866 H11 UQF 60 
UQF H10 H14 H 0 1 N N N N N N 11.400 7.309  12.277 -0.637 3.344  -0.764 H10 UQF 61 
UQF H4  H15 H 0 1 N N N N N N 15.214 5.043  11.399 -3.100 5.838  3.846  H4  UQF 62 
UQF H5  H16 H 0 1 N N N N N N 15.460 3.503  10.646 -3.122 6.162  2.198  H5  UQF 63 
UQF H16 H17 H 0 1 N N N N N N 23.777 11.127 12.885 8.764  -1.227 1.548  H16 UQF 64 
UQF H   H18 H 0 1 N N N N N N 20.273 8.762  14.088 2.726  -0.683 0.085  H   UQF 65 
UQF H1  H19 H 0 1 N N N N N N 19.234 6.281  13.471 2.202  -2.530 1.911  H1  UQF 66 
UQF H20 H20 H 0 1 N N N N N N 17.408 6.061  11.908 4.908  -3.420 3.031  H20 UQF 67 
UQF H19 H21 H 0 1 N N N N N N 16.935 5.444  13.528 3.388  -4.332 3.186  H19 UQF 68 
UQF H22 H22 H 0 1 N N N N N N 17.372 7.033  15.506 4.539  -4.076 0.772  H22 UQF 69 
UQF H24 H23 H 0 1 N N N N N N 17.379 9.390  14.849 4.994  -2.469 -0.822 H24 UQF 70 
UQF H27 H24 H 0 1 N N N N N N 13.221 9.108  10.014 -1.960 2.080  -2.515 H27 UQF 71 
UQF H26 H25 H 0 1 N N N N N N 13.498 10.848 10.368 -1.132 1.365  -3.919 H26 UQF 72 
UQF H2  H26 H 0 1 N N N N N N 15.973 10.350 10.407 -1.636 -0.921 -2.979 H2  UQF 73 
UQF H3  H27 H 0 1 N N N N N N 17.733 8.447  9.446  -3.933 -1.846 -1.585 H3  UQF 74 
UQF H28 H28 H 0 1 N N N N N N 16.431 8.965  6.883  -5.072 0.883  -2.412 H28 UQF 75 
UQF H30 H29 H 0 1 N N N N N N 14.508 9.835  7.793  -3.499 0.996  -4.153 H30 UQF 76 
UQF H32 H30 H 0 1 N N N N N N 14.771 6.730  7.607  -3.843 1.348  0.487  H32 UQF 77 
UQF H33 H31 H 0 1 N N N N N N 20.936 5.400  8.690  -7.953 -3.698 0.278  H33 UQF 78 
UQF H35 H32 H 0 1 N N N N N N 18.912 2.283  6.552  -7.353 0.322  3.645  H35 UQF 79 
UQF H34 H33 H 0 1 N N N N N N 17.388 2.293  7.137  -8.519 -0.877 3.816  H34 UQF 80 
UQF H18 H34 H 0 1 N N N N N N 22.057 14.549 10.939 8.034  3.047  -1.462 H18 UQF 81 
UQF H17 H35 H 0 1 N N N N N N 20.624 14.011 10.369 9.519  2.598  -0.818 H17 UQF 82 
UQF H23 H36 H 0 1 N N N N N N 19.455 7.226  16.587 2.286  -4.934 0.829  H23 UQF 83 
UQF H31 H37 H 0 1 N N N N N N 14.819 12.049 8.476  -4.222 -1.036 -5.183 H31 UQF 84 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UQF N   C   SING N N 1  
UQF N1  C   DOUB N N 2  
UQF C   N2  SING N N 3  
UQF N2  C1  SING N N 4  
UQF C1  C2  SING N N 5  
UQF C2  C3  SING N N 6  
UQF C3  N3  SING N N 7  
UQF C4  N3  SING N N 8  
UQF C5  C4  SING N N 9  
UQF C6  C5  TRIP N N 10 
UQF C7  C6  SING N N 11 
UQF C7  N4  DOUB Y N 12 
UQF N4  C8  SING Y N 13 
UQF C8  C9  DOUB Y N 14 
UQF N5  C9  SING Y N 15 
UQF C10 N5  DOUB Y N 16 
UQF N6  C10 SING Y N 17 
UQF C11 N6  DOUB Y N 18 
UQF C8  C11 SING Y N 19 
UQF N7  C11 SING N N 20 
UQF C9  N8  SING Y N 21 
UQF N8  C7  SING Y N 22 
UQF C12 N8  SING N N 23 
UQF C12 O   SING N N 24 
UQF O   C13 SING N N 25 
UQF C14 C13 SING N N 26 
UQF O1  C14 SING N N 27 
UQF C13 C15 SING N N 28 
UQF O2  C15 SING N N 29 
UQF C15 C16 SING N N 30 
UQF C16 C12 SING N N 31 
UQF O3  C16 SING N N 32 
UQF N3  C17 SING N N 33 
UQF C17 C18 SING N N 34 
UQF C18 O4  SING N N 35 
UQF O4  C19 SING N N 36 
UQF C19 C20 SING N N 37 
UQF O5  C20 SING N N 38 
UQF C20 C21 SING N N 39 
UQF C18 C21 SING N N 40 
UQF C21 O6  SING N N 41 
UQF N9  C19 SING N N 42 
UQF N9  C22 SING Y N 43 
UQF C22 N10 DOUB Y N 44 
UQF N10 C23 SING Y N 45 
UQF C23 C24 DOUB Y N 46 
UQF C24 N9  SING Y N 47 
UQF N11 C24 SING Y N 48 
UQF C25 N11 DOUB Y N 49 
UQF N12 C25 SING Y N 50 
UQF C26 N12 DOUB Y N 51 
UQF C23 C26 SING Y N 52 
UQF N13 C26 SING N N 53 
UQF N1  H6  SING N N 54 
UQF N2  H7  SING N N 55 
UQF O1  H21 SING N N 56 
UQF C1  H9  SING N N 57 
UQF C1  H8  SING N N 58 
UQF O5  H29 SING N N 59 
UQF C4  H15 SING N N 60 
UQF C4  H14 SING N N 61 
UQF C3  H13 SING N N 62 
UQF C3  H12 SING N N 63 
UQF O3  H25 SING N N 64 
UQF C2  H11 SING N N 65 
UQF C2  H10 SING N N 66 
UQF N   H4  SING N N 67 
UQF N   H5  SING N N 68 
UQF C10 H16 SING N N 69 
UQF C12 H   SING N N 70 
UQF C13 H1  SING N N 71 
UQF C14 H20 SING N N 72 
UQF C14 H19 SING N N 73 
UQF C15 H22 SING N N 74 
UQF C16 H24 SING N N 75 
UQF C17 H27 SING N N 76 
UQF C17 H26 SING N N 77 
UQF C18 H2  SING N N 78 
UQF C19 H3  SING N N 79 
UQF C20 H28 SING N N 80 
UQF C21 H30 SING N N 81 
UQF C22 H32 SING N N 82 
UQF C25 H33 SING N N 83 
UQF N13 H35 SING N N 84 
UQF N13 H34 SING N N 85 
UQF N7  H18 SING N N 86 
UQF N7  H17 SING N N 87 
UQF O2  H23 SING N N 88 
UQF O6  H31 SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UQF InChI            InChI                1.06  "InChI=1S/C27H36N14O7/c28-21-15-23(35-9-33-21)40(11-37-15)25-19(45)17(43)12(47-25)7-39(6-2-4-32-27(30)31)5-1-3-14-38-16-22(29)34-10-36-24(16)41(14)26-20(46)18(44)13(8-42)48-26/h9-13,17-20,25-26,42-46H,2,4-8H2,(H2,28,33,35)(H2,29,34,36)(H4,30,31,32)/t12-,13?,17+,18+,19+,20+,25-,26-/m0/s1" 
UQF InChIKey         InChI                1.06  WIINMVYDNPDNAN-QOOQKWEPSA-N                                                                                                                                                                                                                                                                      
UQF SMILES_CANONICAL CACTVS               3.385 "NC(=N)NCCCN(CC#Cc1nc2c(N)ncnc2n1[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)C[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56"                                                                                                                                                                              
UQF SMILES           CACTVS               3.385 "NC(=N)NCCCN(CC#Cc1nc2c(N)ncnc2n1[CH]3O[CH](CO)[CH](O)[CH]3O)C[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56"                                                                                                                                                                                         
UQF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCCN(CC#Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)N)C[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O"                                                                                                                                                                     
UQF SMILES           "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CN(CCCNC(=N)N)CC#Cc4nc5c(ncnc5n4C6C(C(C(O6)CO)O)O)N)O)O)N"                                                                                                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           UQF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[3-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]prop-2-ynyl]amino]propyl]guanidine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UQF "Create component" 2023-09-06 PDBE 
UQF "Initial release"  2025-03-19 RCSB 
# 
