data_52H
#

_chem_comp.id                                   52H
_chem_comp.name                                 "5'-O-{[(2R)-2-hydroxy-3,3-dimethylbutanoyl]sulfamoyl}adenosine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H24 N6 O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "5'-O-(3,3-Dimethyl-2-hydroxybutyrylsulfamoyl) adenosine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-03-31
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       460.462
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    52H
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3COW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
52H  C4      C4    C  0  1  Y  N  N  13.899   9.771  -2.581   3.800   0.037   0.369  C4      52H   1  
52H  C5      C5    C  0  1  Y  N  N  14.944  10.278  -3.370   3.999  -1.348   0.243  C5      52H   2  
52H  C6      C6    C  0  1  Y  N  N  14.826  10.148  -4.755   5.310  -1.843   0.354  C6      52H   3  
52H  C8      C8    C  0  1  Y  N  N  15.434  10.606  -1.294   1.873  -0.979   0.025  C8      52H   4  
52H  N1      N1    N  0  1  Y  N  N  13.695   9.598  -5.245   6.296  -0.980   0.572  N1      52H   5  
52H  N3      N3    N  0  1  Y  N  N  12.802   9.204  -3.143   4.849   0.823   0.586  N3      52H   6  
52H  CAA     CAA   C  0  1  N  N  N  14.724   8.730   9.104  -2.395  -4.115  -1.907  CAA     52H   7  
52H  CBB     CBB   C  0  1  N  N  N  14.542   9.116   7.630  -2.285  -2.781  -1.167  CBB     52H   8  
52H  CAB     CAB   C  0  1  N  N  N  13.797  10.447   7.604  -0.959  -2.727  -0.406  CAB     52H   9  
52H  CAC     CAC   C  0  1  N  N  N  13.760   8.012   6.982  -2.340  -1.632  -2.176  CAC     52H  10  
52H  CAX     CAX   C  0  1  N  N  R  15.919   9.199   6.908  -3.446  -2.648  -0.179  CAX     52H  11  
52H  OAH     OAH   O  0  1  N  N  N  16.672   7.946   7.022  -3.330  -3.655   0.829  OAH     52H  12  
52H  CAT     CAT   C  0  1  N  N  N  15.911   9.569   5.399  -3.405  -1.286   0.465  CAT     52H  13  
52H  OAE     OAE   O  0  1  N  N  N  15.982   8.699   4.524  -2.972  -1.160   1.590  OAE     52H  14  
52H  NAQ     NAQ   N  0  1  N  N  N  15.921  10.867   5.177  -3.849  -0.208  -0.211  NAQ     52H  15  
52H  SBE     SBE   S  0  1  N  N  N  16.061  11.531   3.695  -3.928   1.266   0.540  SBE     52H  16  
52H  OAF     OAF   O  0  1  N  N  N  17.399  11.260   3.130  -4.397   2.188  -0.434  OAF     52H  17  
52H  OAG     OAG   O  0  1  N  N  N  15.720  12.956   3.795  -4.583   1.048   1.783  OAG     52H  18  
52H  "O5'"   O5*   O  0  1  N  N  N  15.156  10.945   2.717  -2.501   1.679   0.873  "O5'"   52H  19  
52H  "C5'"   C5*   C  0  1  N  N  N  13.724  11.129   2.986  -1.748   2.125  -0.257  "C5'"   52H  20  
52H  "C4'"   C4*   C  0  1  N  N  R  12.859  10.231   2.062  -0.338   2.513   0.193  "C4'"   52H  21  
52H  "O4'"   O4*   O  0  1  N  N  N  13.050  10.716   0.708   0.370   1.345   0.642  "O4'"   52H  22  
52H  "C3'"   C3*   C  0  1  N  N  S  13.357   8.788   2.083   0.450   3.096  -0.997  "C3'"   52H  23  
52H  "O3'"   O3*   O  0  1  N  N  N  12.235   7.923   2.059   0.857   4.437  -0.717  "O3'"   52H  24  
52H  "C2'"   C2*   C  0  1  N  N  R  14.167   8.682   0.782   1.684   2.171  -1.126  "C2'"   52H  25  
52H  "O2'"   O2*   O  0  1  N  N  N  14.224   7.352   0.201   2.863   2.929  -1.402  "O2'"   52H  26  
52H  "C1'"   C1*   C  0  1  N  N  R  13.377   9.602  -0.146   1.757   1.529   0.283  "C1'"   52H  27  
52H  N9      N9    N  0  1  Y  N  N  14.220   9.995  -1.310   2.450   0.240   0.227  N9      52H  28  
52H  N7      N7    N  0  1  Y  N  N  15.883  10.793  -2.555   2.784  -1.908   0.029  N7      52H  29  
52H  C2      C2    C  0  1  Y  N  N  12.729   9.112  -4.472   6.060   0.315   0.684  C2      52H  30  
52H  N6      N6    N  0  1  N  N  N  15.796  10.609  -5.571   5.567  -3.198   0.239  N6      52H  31  
52H  H8      H8    H  0  1  N  N  N  15.965  10.900  -0.401   0.817  -1.147  -0.122  H8      52H  32  
52H  HAA     HAA   H  0  1  N  N  N  14.768   7.635   9.194  -2.355  -4.934  -1.188  HAA     52H  33  
52H  HAAA    HAAA  H  0  0  N  N  N  15.659   9.166   9.484  -3.340  -4.153  -2.449  HAAA    52H  34  
52H  HAAB    HAAB  H  0  0  N  N  N  13.875   9.112   9.690  -1.568  -4.210  -2.611  HAAB    52H  35  
52H  HAB     HAB   H  0  1  N  N  N  13.618  10.788   8.634  -0.132  -2.822  -1.110  HAB     52H  36  
52H  HABA    HABA  H  0  0  N  N  N  14.402  11.195   7.071  -0.880  -1.777   0.122  HABA    52H  37  
52H  HABB    HABB  H  0  0  N  N  N  12.834  10.318   7.088  -0.919  -3.546   0.313  HABB    52H  38  
52H  HAC     HAC   H  0  1  N  N  N  13.569   8.267   5.929  -3.285  -1.669  -2.718  HAC     52H  39  
52H  HACA    HACA  H  0  0  N  N  N  14.335   7.076   7.034  -2.261  -0.681  -1.648  HACA    52H  40  
52H  HACB    HACB  H  0  0  N  N  N  12.802   7.884   7.508  -1.514  -1.727  -2.880  HACB    52H  41  
52H  HAX     HAX   H  0  1  N  N  N  16.389  10.036   7.445  -4.390  -2.771  -0.709  HAX     52H  42  
52H  HOAH    HOAH  H  0  0  N  N  N  16.835   7.594   6.155  -2.512  -3.606   1.342  HOAH    52H  43  
52H  HNAQ    HNAQ  H  0  0  N  N  N  15.838  11.480   5.962  -4.123  -0.295  -1.138  HNAQ    52H  44  
52H  "H5'"   H5*   H  0  1  N  N  N  13.521  10.862   4.034  -1.687   1.324  -0.993  "H5'"   52H  45  
52H  "H5'A"  H5*A  H  0  0  N  N  N  13.465  12.180   2.793  -2.238   2.991  -0.701  "H5'A"  52H  46  
52H  "H4'"   H4*   H  0  1  N  N  N  11.812  10.264   2.396  -0.393   3.245   0.998  "H4'"   52H  47  
52H  "H3'"   H3*   H  0  1  N  N  N  13.953   8.520   2.968  -0.152   3.063  -1.905  "H3'"   52H  48  
52H  "HO3'"  HO3*  H  0  0  N  N  N  11.965   7.729   2.949   1.357   4.854  -1.432  "HO3'"  52H  49  
52H  "H2'"   H2*   H  0  1  N  N  N  15.223   8.939   0.951   1.523   1.413  -1.892  "H2'"   52H  50  
52H  "HO2'"  HO2*  H  0  0  N  N  N  14.236   7.420  -0.746   2.828   3.423  -2.233  "HO2'"  52H  51  
52H  "H1'"   H1*   H  0  1  N  N  N  12.478   9.146  -0.586   2.250   2.200   0.986  "H1'"   52H  52  
52H  H2      H2    H  0  1  N  N  N  11.873   8.636  -4.926   6.890   0.981   0.862  H2      52H  53  
52H  HN6     HN6   H  0  1  N  N  N  15.429  10.723  -6.494   4.839  -3.818   0.079  HN6     52H  54  
52H  HN6A    HN6A  H  0  0  N  N  N  16.126  11.490  -5.232   6.476  -3.527   0.317  HN6A    52H  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
52H  C4     C5      DOUB  Y  N   1  
52H  C4     N3      SING  Y  N   2  
52H  C4     N9      SING  Y  N   3  
52H  C5     C6      SING  Y  N   4  
52H  C5     N7      SING  Y  N   5  
52H  C6     N1      DOUB  Y  N   6  
52H  C6     N6      SING  N  N   7  
52H  C8     N9      SING  Y  N   8  
52H  C8     N7      DOUB  Y  N   9  
52H  N1     C2      SING  Y  N  10  
52H  N3     C2      DOUB  Y  N  11  
52H  CAA    CBB     SING  N  N  12  
52H  CBB    CAB     SING  N  N  13  
52H  CBB    CAC     SING  N  N  14  
52H  CBB    CAX     SING  N  N  15  
52H  CAX    OAH     SING  N  N  16  
52H  CAX    CAT     SING  N  N  17  
52H  CAT    OAE     DOUB  N  N  18  
52H  CAT    NAQ     SING  N  N  19  
52H  NAQ    SBE     SING  N  N  20  
52H  SBE    OAF     DOUB  N  N  21  
52H  SBE    OAG     DOUB  N  N  22  
52H  SBE    "O5'"   SING  N  N  23  
52H  "O5'"  "C5'"   SING  N  N  24  
52H  "C5'"  "C4'"   SING  N  N  25  
52H  "C4'"  "O4'"   SING  N  N  26  
52H  "C4'"  "C3'"   SING  N  N  27  
52H  "O4'"  "C1'"   SING  N  N  28  
52H  "C3'"  "O3'"   SING  N  N  29  
52H  "C3'"  "C2'"   SING  N  N  30  
52H  "C2'"  "O2'"   SING  N  N  31  
52H  "C2'"  "C1'"   SING  N  N  32  
52H  "C1'"  N9      SING  N  N  33  
52H  C8     H8      SING  N  N  34  
52H  CAA    HAA     SING  N  N  35  
52H  CAA    HAAA    SING  N  N  36  
52H  CAA    HAAB    SING  N  N  37  
52H  CAB    HAB     SING  N  N  38  
52H  CAB    HABA    SING  N  N  39  
52H  CAB    HABB    SING  N  N  40  
52H  CAC    HAC     SING  N  N  41  
52H  CAC    HACA    SING  N  N  42  
52H  CAC    HACB    SING  N  N  43  
52H  CAX    HAX     SING  N  N  44  
52H  OAH    HOAH    SING  N  N  45  
52H  NAQ    HNAQ    SING  N  N  46  
52H  "C5'"  "H5'"   SING  N  N  47  
52H  "C5'"  "H5'A"  SING  N  N  48  
52H  "C4'"  "H4'"   SING  N  N  49  
52H  "C3'"  "H3'"   SING  N  N  50  
52H  "O3'"  "HO3'"  SING  N  N  51  
52H  "C2'"  "H2'"   SING  N  N  52  
52H  "O2'"  "HO2'"  SING  N  N  53  
52H  "C1'"  "H1'"   SING  N  N  54  
52H  C2     H2      SING  N  N  55  
52H  N6     HN6     SING  N  N  56  
52H  N6     HN6A    SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
52H  SMILES            ACDLabs               10.04  "O=C(NS(=O)(=O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)C(O)C(C)(C)C"  
52H  SMILES_CANONICAL  CACTVS                3.341  "CC(C)(C)[C@@H](O)C(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23"  
52H  SMILES            CACTVS                3.341  "CC(C)(C)[CH](O)C(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23"  
52H  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(C)(C)[C@H](C(=O)NS(=O)(=O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O)O"  
52H  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(C)(C)C(C(=O)NS(=O)(=O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O)O"  
52H  InChI             InChI                 1.03   "InChI=1S/C16H24N6O8S/c1-16(2,3)11(25)14(26)21-31(27,28)29-4-7-9(23)10(24)15(30-7)22-6-20-8-12(17)18-5-19-13(8)22/h5-7,9-11,15,23-25H,4H2,1-3H3,(H,21,26)(H2,17,18,19)/t7-,9-,10-,11+,15-/m1/s1"  
52H  InChIKey          InChI                 1.03   XLQHUZMFAIRQAT-YEFHITBRSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
52H  "SYSTEMATIC NAME"  ACDLabs               10.04  "5'-O-{[(2R)-2-hydroxy-3,3-dimethylbutanoyl]sulfamoyl}adenosine"  
52H  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl N-[(2R)-2-hydroxy-3,3-dimethyl-butanoyl]sulfamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
52H  "Create component"      2008-03-31  RCSB  
52H  "Modify aromatic_flag"  2011-06-04  RCSB  
52H  "Modify descriptor"     2011-06-04  RCSB  
52H  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     52H
_pdbx_chem_comp_synonyms.name        "5'-O-(3,3-Dimethyl-2-hydroxybutyrylsulfamoyl) adenosine"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
